BLASTX nr result

ID: Atractylodes21_contig00015333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015333
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   116   2e-24
emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]   116   2e-24
ref|XP_002514778.1| pentatricopeptide repeat-containing protein,...   110   9e-23
ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21

>ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g02650, mitochondrial-like [Vitis vinifera]
          Length = 509

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/95 (60%), Positives = 72/95 (75%)
 Frame = -2

Query: 287 VLETPHVPGENLIAFFKWSFGGKNQEVFSVTTRSLDALVRAVCTELKKKVAYSLWDLLKE 108
           VLETP VP  NLI FFKWS+       FSVTTR++DALVRAVC  +++K  YSLWDL+KE
Sbjct: 156 VLETPFVPANNLIGFFKWSWKNPG---FSVTTRAVDALVRAVCQSVRRKDTYSLWDLVKE 212

Query: 107 LGEKENSLVTTEMLNALISLFSRLGKGMAGYEVYN 3
           +GEKEN ++   +LN LI+ F++LGKG AG EV+N
Sbjct: 213 IGEKENGVLNVGILNELIAQFAKLGKGKAGLEVFN 247


>emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]
          Length = 549

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/95 (60%), Positives = 72/95 (75%)
 Frame = -2

Query: 287 VLETPHVPGENLIAFFKWSFGGKNQEVFSVTTRSLDALVRAVCTELKKKVAYSLWDLLKE 108
           VLETP VP  NLI FFKWS+       FSVTTR++DALVRAVC  +++K  YSLWDL+KE
Sbjct: 156 VLETPFVPANNLIGFFKWSWKNPG---FSVTTRAVDALVRAVCQSVRRKDTYSLWDLVKE 212

Query: 107 LGEKENSLVTTEMLNALISLFSRLGKGMAGYEVYN 3
           +GEKEN ++   +LN LI+ F++LGKG AG EV+N
Sbjct: 213 IGEKENGVLNVGILNELIAQFAKLGKGKAGLEVFN 247


>ref|XP_002514778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545829|gb|EEF47332.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  110 bits (276), Expect = 9e-23
 Identities = 52/95 (54%), Positives = 74/95 (77%)
 Frame = -2

Query: 287 VLETPHVPGENLIAFFKWSFGGKNQEVFSVTTRSLDALVRAVCTELKKKVAYSLWDLLKE 108
           VLETP + G+NLI FF W+     Q   +VTTR +  LVRA+C+EL+KK AY+LWDL+K+
Sbjct: 175 VLETPLIVGDNLIKFFNWAI---KQPDINVTTRLVHPLVRAICSELRKKDAYALWDLVKD 231

Query: 107 LGEKENSLVTTEMLNALISLFSRLGKGMAGYEVYN 3
           +GE+EN+++  ++LN LI+LFS+LGKG A +EV+N
Sbjct: 232 IGEEENTVLNVDLLNQLIALFSKLGKGKAAFEVFN 266


>ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
           gi|449477884|ref|XP_004155152.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
          Length = 479

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/95 (53%), Positives = 69/95 (72%)
 Frame = -2

Query: 287 VLETPHVPGENLIAFFKWSFGGKNQEVFSVTTRSLDALVRAVCTELKKKVAYSLWDLLKE 108
           V+ETPH+ GENLI FF+W+     +  F V+T  +D LVR VC  L+++VAYSLW+L+KE
Sbjct: 68  VIETPHILGENLIRFFRWAVNSHPE--FEVSTPVVDVLVRVVCANLRQRVAYSLWELIKE 125

Query: 107 LGEKENSLVTTEMLNALISLFSRLGKGMAGYEVYN 3
           +G K+ SL+  E+LN LI+ FS+LGKG A  EV N
Sbjct: 126 IGGKQTSLLNAEILNQLIAFFSKLGKGKAALEVLN 160


>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  106 bits (264), Expect = 2e-21
 Identities = 55/96 (57%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
 Frame = -2

Query: 287 VLETPHVPGENLIAFFKWSFGGKNQEVFSVTTRSLDALVRAVCT-ELKKKVAYSLWDLLK 111
           VLETPHV GENLI FFKW+   K Q++ SVTTR++D LV ++C+ EL++K AY+LWDL++
Sbjct: 66  VLETPHVLGENLIRFFKWAM--KKQDL-SVTTRAIDVLVSSICSSELRRKNAYALWDLVR 122

Query: 110 ELGEKENSLVTTEMLNALISLFSRLGKGMAGYEVYN 3
           E+GEK   LV+   LN LI+L S+LGKG A  EV++
Sbjct: 123 EIGEKNEGLVSVGSLNQLIALLSKLGKGKAALEVFD 158


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