BLASTX nr result

ID: Atractylodes21_contig00015028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015028
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306208.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
ref|XP_002312931.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
ref|XP_002282312.1| PREDICTED: rop guanine nucleotide exchange f...   145   4e-33
ref|XP_004139953.1| PREDICTED: rop guanine nucleotide exchange f...   144   6e-33
gb|AAL07042.1| unknown protein [Arabidopsis thaliana]                 139   2e-31

>ref|XP_002306208.1| predicted protein [Populus trichocarpa] gi|222849172|gb|EEE86719.1|
           predicted protein [Populus trichocarpa]
          Length = 576

 Score =  148 bits (373), Expect = 5e-34
 Identities = 81/125 (64%), Positives = 91/125 (72%)
 Frame = +2

Query: 146 DHGAAASSLTSSPHAAFRTVSVTNSIXXXXXXXXXXXGGKGDVMVWEEKQPRKQPDTDLS 325
           D GA +SS+TSSP        +               GGK DV+VW+ K   K+ D DLS
Sbjct: 46  DGGAVSSSMTSSPRP------LPGGFCFPAPVMVPVIGGK-DVVVWDSKN-EKRGDADLS 97

Query: 326 EIDMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWRLEPLPLQKKVMW 505
           E++MMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSA+VFGELWRLEPL LQKK MW
Sbjct: 98  EVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLALQKKSMW 157

Query: 506 QREME 520
           +REME
Sbjct: 158 KREME 162


>ref|XP_002312931.1| predicted protein [Populus trichocarpa] gi|222849339|gb|EEE86886.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score =  145 bits (365), Expect = 4e-33
 Identities = 80/125 (64%), Positives = 91/125 (72%)
 Frame = +2

Query: 146 DHGAAASSLTSSPHAAFRTVSVTNSIXXXXXXXXXXXGGKGDVMVWEEKQPRKQPDTDLS 325
           D G A+SS+TSSP        V               GGK DV+VW  K  +++ +TDLS
Sbjct: 46  DGGCASSSMTSSPRP------VAGGFCFPAPVMVPVIGGK-DVVVWGSKNEKRR-ETDLS 97

Query: 326 EIDMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWRLEPLPLQKKVMW 505
           E++MMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSA+VFGELWRLEPL  QKK MW
Sbjct: 98  EVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLLPQKKSMW 157

Query: 506 QREME 520
           +REME
Sbjct: 158 KREME 162


>ref|XP_002282312.1| PREDICTED: rop guanine nucleotide exchange factor 1 [Vitis
           vinifera] gi|297744497|emb|CBI37759.3| unnamed protein
           product [Vitis vinifera]
          Length = 587

 Score =  145 bits (365), Expect = 4e-33
 Identities = 83/127 (65%), Positives = 93/127 (73%)
 Frame = +2

Query: 140 RDDHGAAASSLTSSPHAAFRTVSVTNSIXXXXXXXXXXXGGKGDVMVWEEKQPRKQPDTD 319
           R D   A+SS+TSSP A  R V   +S            GG+ DV+VW EK  +++  TD
Sbjct: 39  RYDGEGASSSMTSSPLAC-RPVVGNSSFPVGPPLMLPVIGGR-DVVVWGEKPEKRE--TD 94

Query: 320 LSEIDMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWRLEPLPLQKKV 499
           LSE +MMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSA+VFGELWRLEPL  QKK 
Sbjct: 95  LSEAEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKA 154

Query: 500 MWQREME 520
           MW REME
Sbjct: 155 MWCREME 161


>ref|XP_004139953.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Cucumis
           sativus] gi|449475751|ref|XP_004154542.1| PREDICTED: rop
           guanine nucleotide exchange factor 1-like [Cucumis
           sativus]
          Length = 570

 Score =  144 bits (364), Expect = 6e-33
 Identities = 80/127 (62%), Positives = 91/127 (71%)
 Frame = +2

Query: 140 RDDHGAAASSLTSSPHAAFRTVSVTNSIXXXXXXXXXXXGGKGDVMVWEEKQPRKQPDTD 319
           R D   A+SS+ SSPH       V+ +            GGK DV VW++K   K+ + D
Sbjct: 39  RFDGEGASSSMASSPHP------VSANFCFPPPVSLPVLGGK-DVFVWDDKS--KKREAD 89

Query: 320 LSEIDMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWRLEPLPLQKKV 499
           LSE++MMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWRLEPL  QK+ 
Sbjct: 90  LSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWRLEPLAPQKRA 149

Query: 500 MWQREME 520
           MW REME
Sbjct: 150 MWHREME 156


>gb|AAL07042.1| unknown protein [Arabidopsis thaliana]
          Length = 548

 Score =  139 bits (351), Expect = 2e-31
 Identities = 79/127 (62%), Positives = 88/127 (69%)
 Frame = +2

Query: 140 RDDHGAAASSLTSSPHAAFRTVSVTNSIXXXXXXXXXXXGGKGDVMVWEEKQPRKQPDTD 319
           R D   A+SS+ SSP      V                 GGK   +VW++KQP    D D
Sbjct: 39  RFDGEGASSSIPSSPR-----VVAGRGFYFPAPVMLPVIGGKD--VVWDDKQP----DND 87

Query: 320 LSEIDMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWRLEPLPLQKKV 499
           LSEI+MMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSA+VFGELWRLEPL  QKK 
Sbjct: 88  LSEIEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKA 147

Query: 500 MWQREME 520
           MW+RE+E
Sbjct: 148 MWRRELE 154


Top