BLASTX nr result
ID: Atractylodes21_contig00013842
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00013842
(877 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containi... 177 4e-61
emb|CBI26526.3| unnamed protein product [Vitis vinifera] 177 4e-61
ref|XP_002520026.1| pentatricopeptide repeat-containing protein,... 151 8e-51
ref|XP_002325381.1| predicted protein [Populus trichocarpa] gi|2... 149 5e-50
ref|XP_003532731.1| PREDICTED: pentatricopeptide repeat-containi... 148 3e-48
>ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27270-like
[Vitis vinifera]
Length = 1071
Score = 177 bits (449), Expect(2) = 4e-61
Identities = 89/136 (65%), Positives = 102/136 (75%)
Frame = +1
Query: 256 SHKYMEAEEAIGWMEKEGIPASCAHYNLLLSAFAKAGLVGEAERVYELLNGAGLSPDVGC 435
S K++EAEE I M+ EG+ SC H+N LLSAFAKAG EAERVY L AGLSPDV C
Sbjct: 934 SFKFLEAEETIMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHTLLSAGLSPDVAC 993
Query: 436 YQTMLRVYLDYGCVEKGISLLESISGCVKPDRFIMSAAVHLYRSAGMGLKAEGVLSCMNS 615
Y+TMLR YLDYGCVEKGI+ E I V+PDRFIMS+AVH Y+ AG L+AEG+L M S
Sbjct: 994 YRTMLRGYLDYGCVEKGITFFEQIRESVEPDRFIMSSAVHFYKLAGKELEAEGILDSMKS 1053
Query: 616 LGIPFLKNLGIGLKIK 663
LGIPFLKNL +G K K
Sbjct: 1054 LGIPFLKNLEVGSKTK 1069
Score = 84.7 bits (208), Expect(2) = 4e-61
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +3
Query: 3 GIKPGQVSYNIMMNVYATGGFYKEAAQLFCAMQRDGCSPDSFTYLALIRAY 155
GIKPG+VSYNIM+NVYAT G + EA +LF AM RDGCSPDS TYLALIRAY
Sbjct: 881 GIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAY 931
Score = 46.6 bits (109), Expect(2) = 9e-06
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Frame = +1
Query: 262 KYMEAEEAIGWMEKEGIPASCAHYNLLLSAFAKAGLVGEAERVYELLNGAGLSPDVGCYQ 441
K EA M++EGI YN++++ +A AGL EA+ +++ + G SPD Y
Sbjct: 866 KSHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYL 925
Query: 442 TMLRVYL-DYGCVEKGISLLESISGCVKPDRFIMSAAVHLYRSAGMGLKAEGVLSCMNSL 618
++R Y + +E +++ + V P + + + AG +AE V + S
Sbjct: 926 ALIRAYTQSFKFLEAEETIMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHTLLSA 985
Query: 619 GI 624
G+
Sbjct: 986 GL 987
Score = 29.3 bits (64), Expect(2) = 9e-06
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 3 GIKPGQVSYNIMMNVYATGGFYKEAAQLF--CAMQRDGCSPDSFTYLALIRAY 155
G+ P +YN M++VY G +A ++F G S D TY LI Y
Sbjct: 809 GVAPSIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYY 861
>emb|CBI26526.3| unnamed protein product [Vitis vinifera]
Length = 1005
Score = 177 bits (449), Expect(2) = 4e-61
Identities = 89/136 (65%), Positives = 102/136 (75%)
Frame = +1
Query: 256 SHKYMEAEEAIGWMEKEGIPASCAHYNLLLSAFAKAGLVGEAERVYELLNGAGLSPDVGC 435
S K++EAEE I M+ EG+ SC H+N LLSAFAKAG EAERVY L AGLSPDV C
Sbjct: 868 SFKFLEAEETIMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHTLLSAGLSPDVAC 927
Query: 436 YQTMLRVYLDYGCVEKGISLLESISGCVKPDRFIMSAAVHLYRSAGMGLKAEGVLSCMNS 615
Y+TMLR YLDYGCVEKGI+ E I V+PDRFIMS+AVH Y+ AG L+AEG+L M S
Sbjct: 928 YRTMLRGYLDYGCVEKGITFFEQIRESVEPDRFIMSSAVHFYKLAGKELEAEGILDSMKS 987
Query: 616 LGIPFLKNLGIGLKIK 663
LGIPFLKNL +G K K
Sbjct: 988 LGIPFLKNLEVGSKTK 1003
Score = 84.7 bits (208), Expect(2) = 4e-61
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +3
Query: 3 GIKPGQVSYNIMMNVYATGGFYKEAAQLFCAMQRDGCSPDSFTYLALIRAY 155
GIKPG+VSYNIM+NVYAT G + EA +LF AM RDGCSPDS TYLALIRAY
Sbjct: 815 GIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAY 865
Score = 46.6 bits (109), Expect(2) = 9e-06
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Frame = +1
Query: 262 KYMEAEEAIGWMEKEGIPASCAHYNLLLSAFAKAGLVGEAERVYELLNGAGLSPDVGCYQ 441
K EA M++EGI YN++++ +A AGL EA+ +++ + G SPD Y
Sbjct: 800 KSHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYL 859
Query: 442 TMLRVYL-DYGCVEKGISLLESISGCVKPDRFIMSAAVHLYRSAGMGLKAEGVLSCMNSL 618
++R Y + +E +++ + V P + + + AG +AE V + S
Sbjct: 860 ALIRAYTQSFKFLEAEETIMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHTLLSA 919
Query: 619 GI 624
G+
Sbjct: 920 GL 921
Score = 29.3 bits (64), Expect(2) = 9e-06
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 3 GIKPGQVSYNIMMNVYATGGFYKEAAQLF--CAMQRDGCSPDSFTYLALIRAY 155
G+ P +YN M++VY G +A ++F G S D TY LI Y
Sbjct: 743 GVAPSIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYY 795
>ref|XP_002520026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540790|gb|EEF42350.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1040
Score = 151 bits (381), Expect(2) = 8e-51
Identities = 81/135 (60%), Positives = 97/135 (71%)
Frame = +1
Query: 256 SHKYMEAEEAIGWMEKEGIPASCAHYNLLLSAFAKAGLVGEAERVYELLNGAGLSPDVGC 435
S KY EAEE I M K+G+ SC+H+N LLSA+AKAGL+ EAERVY+ L +GLSPD+ C
Sbjct: 875 SLKYSEAEETIDGMPKKGVLPSCSHFNHLLSAYAKAGLMVEAERVYKKLLTSGLSPDLAC 934
Query: 436 YQTMLRVYLDYGCVEKGISLLESISGCVKPDRFIMSAAVHLYRSAGMGLKAEGVLSCMNS 615
Y+ MLR YLDYG VEKGI+ E I + DRFIMSAAVHLY+ AG AE +L MN+
Sbjct: 935 YRAMLRGYLDYGQVEKGINFFEQIKKYAESDRFIMSAAVHLYKFAGKEPMAEVLLGSMNN 994
Query: 616 LGIPFLKNLGIGLKI 660
L I FL NL +G KI
Sbjct: 995 LKISFLHNLQVGSKI 1009
Score = 76.3 bits (186), Expect(2) = 8e-51
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = +3
Query: 3 GIKPGQVSYNIMMNVYATGGFYKEAAQLFCAMQRDGCSPDSFTYLALIRAY 155
GIKPG+VSYNIM+ V+A G Y EA +LF AMQRDG PDSFTYL+L++AY
Sbjct: 822 GIKPGKVSYNIMIKVFAIAGLYHEAKELFHAMQRDGWPPDSFTYLSLVQAY 872
Score = 44.7 bits (104), Expect(2) = 6e-06
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Frame = +1
Query: 262 KYMEAEEAIGWMEKEGIPASCAHYNLLLSAFAKAGLVGEAERVYELLNGAGLSPDVGCYQ 441
K EA M++EGI YN+++ FA AGL EA+ ++ + G PD Y
Sbjct: 807 KRNEASLLFTKMQEEGIKPGKVSYNIMIKVFAIAGLYHEAKELFHAMQRDGWPPDSFTYL 866
Query: 442 TMLRVY---LDYGCVEKGISLLESISGCVKPDRFIMSAAVHL------YRSAGMGLKAEG 594
++++ Y L Y E E+I G P + ++ + H Y AG+ ++AE
Sbjct: 867 SLVQAYTESLKYSEAE------ETIDG--MPKKGVLPSCSHFNHLLSAYAKAGLMVEAER 918
Query: 595 VLSCMNSLGI 624
V + + G+
Sbjct: 919 VYKKLLTSGL 928
Score = 32.0 bits (71), Expect(2) = 6e-06
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 3 GIKPGQVSYNIMMNVYATGGFYKEAAQLFCAMQRDGCSPDSFTYLALIRAY 155
G+ P +YN M++VY G +A ++F G S D Y+ ++ Y
Sbjct: 752 GVTPSIQTYNTMISVYGRGEKLDKAVEIFNTACSSGVSLDEKAYMNMVSYY 802
>ref|XP_002325381.1| predicted protein [Populus trichocarpa] gi|222862256|gb|EEE99762.1|
predicted protein [Populus trichocarpa]
Length = 1071
Score = 149 bits (375), Expect(2) = 5e-50
Identities = 81/136 (59%), Positives = 95/136 (69%)
Frame = +1
Query: 256 SHKYMEAEEAIGWMEKEGIPASCAHYNLLLSAFAKAGLVGEAERVYELLNGAGLSPDVGC 435
S K +EAEE I M+K+GIP SCAH+ LL A KAGL+ EAERVY L AGL+PD+ C
Sbjct: 922 SSKCLEAEETINAMQKKGIPPSCAHFKHLLYALVKAGLMVEAERVYMELLSAGLNPDLVC 981
Query: 436 YQTMLRVYLDYGCVEKGISLLESISGCVKPDRFIMSAAVHLYRSAGMGLKAEGVLSCMNS 615
+ MLR Y+DYG VEKGI E I VK DRFIMSAAVHLY+SAG L+AE + M S
Sbjct: 982 CRAMLRGYMDYGHVEKGIKFYEQIRELVKADRFIMSAAVHLYKSAGKKLEAEVLFESMKS 1041
Query: 616 LGIPFLKNLGIGLKIK 663
L I FL L +GLKI+
Sbjct: 1042 LRISFLNELEVGLKIQ 1057
Score = 75.9 bits (185), Expect(2) = 5e-50
Identities = 33/52 (63%), Positives = 40/52 (76%)
Frame = +3
Query: 3 GIKPGQVSYNIMMNVYATGGFYKEAAQLFCAMQRDGCSPDSFTYLALIRAYA 158
GIKPG VSYN+M VYA G Y E +LF M+RDGC PDSFTYL+L++AY+
Sbjct: 869 GIKPGVVSYNVMAKVYAMSGLYHEVEELFKVMERDGCPPDSFTYLSLVQAYS 920
>ref|XP_003532731.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27270-like
[Glycine max]
Length = 1079
Score = 148 bits (373), Expect(2) = 3e-48
Identities = 75/132 (56%), Positives = 96/132 (72%)
Frame = +1
Query: 256 SHKYMEAEEAIGWMEKEGIPASCAHYNLLLSAFAKAGLVGEAERVYELLNGAGLSPDVGC 435
S Y +AEE I M+ +GIP SC H+N+LL AF KAGL+ EA+RVYE L+ GL PD+ C
Sbjct: 940 SLNYSKAEETIHAMQSKGIPPSCVHFNILLHAFIKAGLIHEAKRVYEDLSTFGLVPDLVC 999
Query: 436 YQTMLRVYLDYGCVEKGISLLESISGCVKPDRFIMSAAVHLYRSAGMGLKAEGVLSCMNS 615
++TML YL G VE+GI+ ESI K DRFIMSAAVH Y+SAG G +A+ +L+ MN+
Sbjct: 1000 HRTMLNGYLKCGYVEEGINFFESICESTKSDRFIMSAAVHFYKSAGKGRQAKEILNLMNN 1059
Query: 616 LGIPFLKNLGIG 651
+GIPFLK L +G
Sbjct: 1060 MGIPFLKKLEVG 1071
Score = 70.9 bits (172), Expect(2) = 3e-48
Identities = 33/51 (64%), Positives = 39/51 (76%)
Frame = +3
Query: 3 GIKPGQVSYNIMMNVYATGGFYKEAAQLFCAMQRDGCSPDSFTYLALIRAY 155
GIKPG+VSYNIM+NVYA G E +LF MQR G PDSFTYL+L++AY
Sbjct: 887 GIKPGKVSYNIMINVYANAGVLHETEKLFHTMQRQGYLPDSFTYLSLVQAY 937