BLASTX nr result

ID: Atractylodes21_contig00013634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013634
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_193158.2| E3 ubiquitin-protein ligase RHF1A [Arabidopsis ...   100   9e-20
emb|CAB46003.1| RING-H2 finger protein RHF1a [Arabidopsis thalia...   100   9e-20
ref|XP_003528675.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   100   2e-19
dbj|BAC42605.1| putative RING-H2 finger protein RHF1a [Arabidops...   100   2e-19
ref|XP_003550504.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...    98   8e-19

>ref|NP_193158.2| E3 ubiquitin-protein ligase RHF1A [Arabidopsis thaliana]
           gi|75339838|sp|Q4TU14.1|RHF1A_ARATH RecName: Full=E3
           ubiquitin-protein ligase RHF1A; AltName: Full=RING-H2
           zinc finger protein RHF1a gi|66865948|gb|AAY57608.1|
           RING finger family protein [Arabidopsis thaliana]
           gi|332657995|gb|AEE83395.1| E3 ubiquitin-protein ligase
           RHF1A [Arabidopsis thaliana]
          Length = 371

 Score =  100 bits (250), Expect = 9e-20
 Identities = 45/66 (68%), Positives = 55/66 (83%)
 Frame = +1

Query: 19  VAADDRTSEEDVCSICLEAFDSHHNPSTVTICKHEFHIQCILEWSQRSKECPICLQVIVL 198
           VA+DD  + +D CSICLE F +  +PSTVT CKHE+H+QCI+EWSQRSKECPIC Q+ VL
Sbjct: 34  VASDDDNNTDDACSICLEPF-TLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQLFVL 92

Query: 199 KDPASQ 216
           +DPASQ
Sbjct: 93  RDPASQ 98


>emb|CAB46003.1| RING-H2 finger protein RHF1a [Arabidopsis thaliana]
           gi|7268127|emb|CAB78464.1| RING-H2 finger protein RHF1a
           [Arabidopsis thaliana]
          Length = 376

 Score =  100 bits (250), Expect = 9e-20
 Identities = 45/66 (68%), Positives = 55/66 (83%)
 Frame = +1

Query: 19  VAADDRTSEEDVCSICLEAFDSHHNPSTVTICKHEFHIQCILEWSQRSKECPICLQVIVL 198
           VA+DD  + +D CSICLE F +  +PSTVT CKHE+H+QCI+EWSQRSKECPIC Q+ VL
Sbjct: 34  VASDDDNNTDDACSICLEPF-TLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQLFVL 92

Query: 199 KDPASQ 216
           +DPASQ
Sbjct: 93  RDPASQ 98


>ref|XP_003528675.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
          Length = 371

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/65 (70%), Positives = 54/65 (83%)
 Frame = +1

Query: 22  AADDRTSEEDVCSICLEAFDSHHNPSTVTICKHEFHIQCILEWSQRSKECPICLQVIVLK 201
           A DD  S ED CSICLE F S H+P+T+T CKHE+H+ CILEWSQRSKECPIC Q+++LK
Sbjct: 27  AFDD--SSEDACSICLEPF-STHDPATITSCKHEYHLHCILEWSQRSKECPICWQLLILK 83

Query: 202 DPASQ 216
           DPASQ
Sbjct: 84  DPASQ 88


>dbj|BAC42605.1| putative RING-H2 finger protein RHF1a [Arabidopsis thaliana]
          Length = 371

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 44/66 (66%), Positives = 55/66 (83%)
 Frame = +1

Query: 19  VAADDRTSEEDVCSICLEAFDSHHNPSTVTICKHEFHIQCILEWSQRSKECPICLQVIVL 198
           VA+DD  + +D CSICLE F +  +PSTVT CKHE+H+QCI+EWSQRS+ECPIC Q+ VL
Sbjct: 34  VASDDDNNTDDACSICLEPF-TLQDPSTVTSCKHEYHLQCIIEWSQRSRECPICWQLFVL 92

Query: 199 KDPASQ 216
           +DPASQ
Sbjct: 93  RDPASQ 98


>ref|XP_003550504.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
          Length = 376

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/65 (69%), Positives = 53/65 (81%)
 Frame = +1

Query: 22  AADDRTSEEDVCSICLEAFDSHHNPSTVTICKHEFHIQCILEWSQRSKECPICLQVIVLK 201
           A DD  S ED CSICLE F S H+P+T+T CKHE+H+ CILEW QRSKECPIC Q+++LK
Sbjct: 32  AFDD--SSEDACSICLEPF-STHDPATITSCKHEYHLHCILEWLQRSKECPICWQLLILK 88

Query: 202 DPASQ 216
           DPASQ
Sbjct: 89  DPASQ 93