BLASTX nr result

ID: Atractylodes21_contig00013629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013629
         (1041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302217.1| predicted protein [Populus trichocarpa] gi|2...    77   7e-12
ref|XP_002520303.1| protein with unknown function [Ricinus commu...    66   2e-08
ref|XP_002893176.1| hypothetical protein ARALYDRAFT_313049 [Arab...    58   3e-06

>ref|XP_002302217.1| predicted protein [Populus trichocarpa] gi|222843943|gb|EEE81490.1|
            predicted protein [Populus trichocarpa]
          Length = 2120

 Score = 77.0 bits (188), Expect = 7e-12
 Identities = 70/198 (35%), Positives = 97/198 (48%), Gaps = 10/198 (5%)
 Frame = +1

Query: 478  RDISNIVTQEQQVFRDNDDRHGGNIDRYASGSRNLEDFVDKY---GPRYMTTML-ENERS 645
            R +SN V   +    + ++R   N D +  GS N   F D+     PR  +     NE  
Sbjct: 198  RTVSNQVRGFESNSGNYENRRRLNYDYHDKGSANQSWFRDREVVREPRDSSIEFGSNEIG 257

Query: 646  CDLHHAMKGKKSEFGHGGTGREQSRDYEYESSKLNRVREGREEF-----KQVQKKSVLLR 810
                    GK+  +      R +  + E E     R REG  EF     KQVQKKS LLR
Sbjct: 258  DGETRIATGKREHY------RSREGNLEVERHGGKRSREGSYEFNRTPRKQVQKKSALLR 311

Query: 811  IGKPNNTYNVRNRSHDQHFSKAYLVESSNNSNFRGKDKDKDRDHTGKDSNSSLYLDQRV- 987
            I +P+     RNR  D+    +  V+ + +S+FRGKD++      GKD +  ++ D+ + 
Sbjct: 312  IQQPS----YRNRE-DERLPYSGYVDDTKSSSFRGKDQESGF-FRGKDKDKVIHTDRGMG 365

Query: 988  EGGRESSPVELDVSFKSN 1041
            EG RE SPVELDVSFKSN
Sbjct: 366  EGEREGSPVELDVSFKSN 383


>ref|XP_002520303.1| protein with unknown function [Ricinus communis]
            gi|223540522|gb|EEF42089.1| protein with unknown function
            [Ricinus communis]
          Length = 2030

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 30/259 (11%)
 Frame = +1

Query: 355  RPHPDDRLYSSNPPSENY--------YKPQRVIPSSRYRDDAIIDGYGSRDISNIVTQEQ 510
            R HPD   +  +PP            ++ + + P S ++     D Y  R + +     Q
Sbjct: 89   RSHPDALNFPQSPPPSRLPSDFIGGDFQSRALQPGSYHQHPLDPDSY-RRQLDHHHHHHQ 147

Query: 511  -------QVFRDNDDRHGGNIDRYASGSRNLEDFVDKYGPRYMTTMLENER----SCDLH 657
                   ++  ++  +  G++  + S SR+           +    +EN+R      ++ 
Sbjct: 148  PMSPINPRIIEEHKQQQRGDLS-FGSNSRDFRIAASNNQINHTEEGIENQRWVRRGREII 206

Query: 658  HAMKGKKSEFGHGGTGREQ---SRDYEYESSKLNRVREGREEF------KQVQKKSVLLR 810
              +         G   RE    SR++  ES +    REG  EF      KQ+ KKS LLR
Sbjct: 207  RGVHDSVISDSDGNRKREHYRSSREFNVESGQ-GSSREGSHEFSRTTPRKQLPKKSALLR 265

Query: 811  IGKPN-NTYNVRNRSHDQHFSKAYLVESSNNSNFRG-KDKDKDRDHTGKDSNSSLYLDQR 984
            I KP    + +R+     H+S AY   ++ +S+FRG KDKD++  H  +++   +     
Sbjct: 266  IQKPTIQKFRIRDDDRGHHYS-AYFDHTNYSSSFRGIKDKDQNLSHLDRETGDQV----- 319

Query: 985  VEGGRESSPVELDVSFKSN 1041
                RE S +ELDVSFKSN
Sbjct: 320  ----REGSTMELDVSFKSN 334


>ref|XP_002893176.1| hypothetical protein ARALYDRAFT_313049 [Arabidopsis lyrata subsp.
            lyrata] gi|297339018|gb|EFH69435.1| hypothetical protein
            ARALYDRAFT_313049 [Arabidopsis lyrata subsp. lyrata]
          Length = 2132

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 77/273 (28%), Positives = 109/273 (39%), Gaps = 30/273 (10%)
 Frame = +1

Query: 313  RADCWSD---PHRVL--PERPHPDDRLYSSNPPSENYYKPQRVIPSSRYRDDAIIDGYGS 477
            R D W+    P R+   P R +  D  YS N   E+    + +  SSR RD+    GY  
Sbjct: 153  RLDSWTGDAAPGRIDSGPSRNYQYD--YSRNLSRESSGVNRGLDGSSRSRDEFRNLGYAR 210

Query: 478  RDISNIVT----QEQQVFRDNDDRHGGNIDRYASGSRNLEDFVDKYGPRY-MTTMLENER 642
            ++     T    Q +   +   DR    +D    G+R L   V     RY +T   +  R
Sbjct: 211  KESGATRTEGNYQARGQLKSESDRFVRGLDE---GNRVLSSSVGYGSDRYGLTVSRDVTR 267

Query: 643  SCDLHHAMKG----------------KKSEFGHGGTGREQSRDYEYESSKLNRVREGREE 774
            S       +                 KK ++ H    +   R    ESS+LNR       
Sbjct: 268  SSASREGARNQRWDEARNEGRTLHPQKKDDYYHSEIEQYFDRGRREESSELNRTPR---- 323

Query: 775  FKQVQKKSVLLRIGKPNNTYNVR----NRSHDQHFSKAYLVESSNNSNFRGKDKDKDRDH 942
             KQ+QKKS LLR+  P +  N R    +R H+ H  K        ++++RGK+      H
Sbjct: 324  -KQIQKKSALLRLETPRSYQNSRENDWSRQHNHHNGKRLY-----SNSYRGKE------H 371

Query: 943  TGKDSNSSLYLDQRVEGGRESSPVELDVSFKSN 1041
             G            VE  R  SPV+LD+SFKSN
Sbjct: 372  MGHSDRGL------VEKQRGRSPVDLDISFKSN 398


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