BLASTX nr result

ID: Atractylodes21_contig00013453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013453
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553337.1| PREDICTED: uncharacterized protein LOC100779...    82   4e-14
gb|ACU19651.1| unknown [Glycine max]                                   82   4e-14
gb|ACU18927.1| unknown [Glycine max]                                   82   4e-14
ref|NP_568522.1| RNA recognition motif (RRM)-containing protein ...    82   5e-14
ref|XP_002868391.1| RNA recognition motif-containing protein [Ar...    81   1e-13

>ref|XP_003553337.1| PREDICTED: uncharacterized protein LOC100779011 [Glycine max]
          Length = 189

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 41/48 (85%), Positives = 45/48 (93%)
 Frame = -3

Query: 539 KAKAFDEKHQLRANASARVISLDKRVGLTEKFSVGMSVVNQKVKSVDQ 396
           KAKAFDEKHQL ANASA+VISLDKRVGLTEK +VG++ VNQKVKSVDQ
Sbjct: 64  KAKAFDEKHQLTANASAKVISLDKRVGLTEKLTVGIAAVNQKVKSVDQ 111



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/49 (71%), Positives = 39/49 (79%)
 Frame = -1

Query: 250 SRYVTAGAAWLNGAFGKVAKAGQVAGTKTRHKWNLAVSNLTTKDSGITA 104
           SRYVTAG AW NGAF KVAKAG VA TKTR K++LAVSNLT K+  + A
Sbjct: 140 SRYVTAGTAWFNGAFSKVAKAGHVASTKTREKFHLAVSNLTAKEPSVAA 188


>gb|ACU19651.1| unknown [Glycine max]
          Length = 273

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 41/48 (85%), Positives = 45/48 (93%)
 Frame = -3

Query: 539 KAKAFDEKHQLRANASARVISLDKRVGLTEKFSVGMSVVNQKVKSVDQ 396
           KAKAFDEKHQL ANASA+VISLDKRVGLTEK +VG++ VNQKVKSVDQ
Sbjct: 148 KAKAFDEKHQLTANASAKVISLDKRVGLTEKLTVGIAAVNQKVKSVDQ 195



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/49 (71%), Positives = 39/49 (79%)
 Frame = -1

Query: 250 SRYVTAGAAWLNGAFGKVAKAGQVAGTKTRHKWNLAVSNLTTKDSGITA 104
           SRYVTAG AW NGAF KVAKAG VA TKTR K++LAVSNLT K+  + A
Sbjct: 224 SRYVTAGTAWFNGAFSKVAKAGHVASTKTREKFHLAVSNLTAKEPSVAA 272


>gb|ACU18927.1| unknown [Glycine max]
          Length = 276

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 41/48 (85%), Positives = 45/48 (93%)
 Frame = -3

Query: 539 KAKAFDEKHQLRANASARVISLDKRVGLTEKFSVGMSVVNQKVKSVDQ 396
           KAKAFDEKHQL ANASA+VISLDKRVGLTEK +VG++ VNQKVKSVDQ
Sbjct: 151 KAKAFDEKHQLTANASAKVISLDKRVGLTEKLTVGIAAVNQKVKSVDQ 198



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/49 (71%), Positives = 39/49 (79%)
 Frame = -1

Query: 250 SRYVTAGAAWLNGAFGKVAKAGQVAGTKTRHKWNLAVSNLTTKDSGITA 104
           SRYVTAG AW NGAF KVAKAG VA TKTR K++LAVSNLT K+  + A
Sbjct: 227 SRYVTAGTAWFNGAFSKVAKAGHVASTKTREKFHLAVSNLTAKEPSVAA 275


>ref|NP_568522.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
           thaliana] gi|21593919|gb|AAM65884.1| unknown
           [Arabidopsis thaliana] gi|26450493|dbj|BAC42360.1|
           unknown protein [Arabidopsis thaliana]
           gi|28973403|gb|AAO64026.1| putative RRM-containing
           protein [Arabidopsis thaliana]
           gi|332006499|gb|AED93882.1| RNA recognition motif
           (RRM)-containing protein [Arabidopsis thaliana]
          Length = 267

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/48 (85%), Positives = 44/48 (91%)
 Frame = -3

Query: 539 KAKAFDEKHQLRANASARVISLDKRVGLTEKFSVGMSVVNQKVKSVDQ 396
           KAKAFDEKHQLRANASA+V S DKRVGLTEK SVG+S VN+KVKSVDQ
Sbjct: 143 KAKAFDEKHQLRANASAKVSSFDKRVGLTEKLSVGISAVNEKVKSVDQ 190



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/47 (70%), Positives = 42/47 (89%)
 Frame = -1

Query: 250 SRYVTAGAAWLNGAFGKVAKAGQVAGTKTRHKWNLAVSNLTTKDSGI 110
           SRYVTAGAAW +GAF KVA+ GQVAG+KT+ K+NLAVSN+++KD+ I
Sbjct: 219 SRYVTAGAAWFSGAFSKVARVGQVAGSKTKEKFNLAVSNMSSKDTPI 265


>ref|XP_002868391.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297314227|gb|EFH44650.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 267

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/48 (83%), Positives = 44/48 (91%)
 Frame = -3

Query: 539 KAKAFDEKHQLRANASARVISLDKRVGLTEKFSVGMSVVNQKVKSVDQ 396
           KAKAFDEKHQLRANASA+V S DKRVGLTEK +VG+S VN+KVKSVDQ
Sbjct: 143 KAKAFDEKHQLRANASAKVSSFDKRVGLTEKLTVGISAVNEKVKSVDQ 190



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/47 (70%), Positives = 42/47 (89%)
 Frame = -1

Query: 250 SRYVTAGAAWLNGAFGKVAKAGQVAGTKTRHKWNLAVSNLTTKDSGI 110
           SRYVTAGAAW +GAF KVA+ GQVAG+KT+ K+NLAVSN+++KD+ I
Sbjct: 219 SRYVTAGAAWFSGAFSKVARVGQVAGSKTKEKFNLAVSNMSSKDTPI 265


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