BLASTX nr result

ID: Atractylodes21_contig00013365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013365
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...   151   6e-35
emb|CBI21840.3| unnamed protein product [Vitis vinifera]              149   2e-34
gb|AFK47046.1| unknown [Lotus japonicus]                              149   4e-34
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]   149   4e-34
ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   134   1e-29

>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score =  151 bits (382), Expect = 6e-35
 Identities = 72/136 (52%), Positives = 101/136 (74%)
 Frame = -1

Query: 557 ILSSLARLDCMDDMEKIYNEWEAGYKSFDFQVPNLLITVYCKKGLLEKAETLVKKLIESG 378
           ++SSL +LD MD  EK + EW +G K FDF+VPNLLI  YCKKGLLEKAE LV + IE G
Sbjct: 317 MVSSLLKLDDMDGAEKTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQG 376

Query: 377 KEPNASTWSRMALGYVKNDRMEEAVEAMRKSILGSLSGWTVDTASLSACLDFLNRKGRLD 198
           +EP A TW  +A GY +N++ME+AV+ ++K++L +  GW  +  +LSACL++L  KG ++
Sbjct: 377 EEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQGWKPNPVTLSACLEYLKGKGDVE 436

Query: 197 EAEEMIKLLREKGHLS 150
           EAE +I+LLRE+  +S
Sbjct: 437 EAENLIRLLREQSLVS 452


>emb|CBI21840.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  149 bits (377), Expect = 2e-34
 Identities = 71/134 (52%), Positives = 99/134 (73%)
 Frame = -1

Query: 551 SSLARLDCMDDMEKIYNEWEAGYKSFDFQVPNLLITVYCKKGLLEKAETLVKKLIESGKE 372
           +SL +LD MD  EK + EW +G K FDF+VPNLLI  YCKKGLLEKAE LV + IE G+E
Sbjct: 266 NSLLKLDDMDGAEKTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEE 325

Query: 371 PNASTWSRMALGYVKNDRMEEAVEAMRKSILGSLSGWTVDTASLSACLDFLNRKGRLDEA 192
           P A TW  +A GY +N++ME+AV+ ++K++L +  GW  +  +LSACL++L  KG ++EA
Sbjct: 326 PIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQGWKPNPVTLSACLEYLKGKGDVEEA 385

Query: 191 EEMIKLLREKGHLS 150
           E +I+LLRE+  +S
Sbjct: 386 ENLIRLLREQSLVS 399


>gb|AFK47046.1| unknown [Lotus japonicus]
          Length = 496

 Score =  149 bits (375), Expect = 4e-34
 Identities = 69/145 (47%), Positives = 103/145 (71%)
 Frame = -1

Query: 560 CILSSLARLDCMDDMEKIYNEWEAGYKSFDFQVPNLLITVYCKKGLLEKAETLVKKLIES 381
           C+LSSL +LD  D  EKI  EWE+ +K+FD ++PNL+IT YCK+GLL+KAE  ++KL++S
Sbjct: 315 CMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDS 374

Query: 380 GKEPNASTWSRMALGYVKNDRMEEAVEAMRKSILGSLSGWTVDTASLSACLDFLNRKGRL 201
           GK+ + S+W RMA GY  ++ ME+AV+ M+K+IL +  GW    ++L AC+ +L  K  L
Sbjct: 375 GKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILANRPGWRPSPSTLVACITYLKEKLDL 434

Query: 200 DEAEEMIKLLREKGHLSKAVYMGIV 126
           + A E++KL +E GH+    Y G+V
Sbjct: 435 ESALEILKLCKEDGHIKITTYDGLV 459


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score =  149 bits (375), Expect = 4e-34
 Identities = 71/136 (52%), Positives = 100/136 (73%)
 Frame = -1

Query: 557 ILSSLARLDCMDDMEKIYNEWEAGYKSFDFQVPNLLITVYCKKGLLEKAETLVKKLIESG 378
           ++SSL +LD MD  EK + EW +G K FDF+VPNLLI  YCKKGLLEKAE LV + IE G
Sbjct: 317 MVSSLLKLDDMDGAEKTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQG 376

Query: 377 KEPNASTWSRMALGYVKNDRMEEAVEAMRKSILGSLSGWTVDTASLSACLDFLNRKGRLD 198
           +EP A TW  +A GY +N++ME+AV+ ++K++L +  GW  +  +LSACL++L  K  ++
Sbjct: 377 EEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQGWKPNPVTLSACLEYLKGKXDVE 436

Query: 197 EAEEMIKLLREKGHLS 150
           EAE +I+LLRE+  +S
Sbjct: 437 EAENLIRLLREQSLVS 452


>ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g20710, mitochondrial-like [Glycine max]
          Length = 482

 Score =  134 bits (336), Expect = 1e-29
 Identities = 67/152 (44%), Positives = 100/152 (65%), Gaps = 1/152 (0%)
 Frame = -1

Query: 557 ILSSLARLDCMDDMEKIYNEWEAGYKSFDFQVPNLLITVYCKKGLLEKAETLVKKLIESG 378
           +LSSLA+LD +D  EKI  EWE+ Y +FD ++PNL+I+ YCK G  +KAE  +++L++ G
Sbjct: 304 MLSSLAKLDEIDGAEKILEEWESKYANFDVRIPNLMISAYCKWGQFDKAEAYIRRLLDGG 363

Query: 377 KEPNASTWSRMALGYVKNDRMEEAVEAMRKSILGSLSGWTVDTASLSACLDFLNRKGRLD 198
           K+ +  TW R+A GY   + ME+AV+AM+K++  +L G   D  +L AC+ +L  KG LD
Sbjct: 364 KQLDGRTWDRLACGYKAGNDMEKAVQAMKKAVSKNLGGRRPDPFTLVACVKYLKEKGDLD 423

Query: 197 EAEEMIKLLREKGHLSKAVYMGIVKKL-SENP 105
            A E++KL  E  H+S   Y G+   + SE P
Sbjct: 424 LALEILKLCIENSHISVTSYDGLSSYVHSETP 455


Top