BLASTX nr result

ID: Atractylodes21_contig00013209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013209
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520493.1| Transcription elongation factor B polypeptid...   177   2e-42
ref|XP_002314149.1| predicted protein [Populus trichocarpa] gi|2...   176   5e-42
ref|XP_002282124.1| PREDICTED: transcription elongation factor B...   174   1e-41
ref|XP_004145280.1| PREDICTED: transcription elongation factor B...   174   2e-41
ref|NP_001235513.1| uncharacterized protein LOC100305702 [Glycin...   172   5e-41

>ref|XP_002520493.1| Transcription elongation factor B polypeptide, putative [Ricinus
           communis] gi|223540335|gb|EEF41906.1| Transcription
           elongation factor B polypeptide, putative [Ricinus
           communis]
          Length = 98

 Score =  177 bits (448), Expect = 2e-42
 Identities = 86/95 (90%), Positives = 90/95 (94%)
 Frame = +2

Query: 92  MKKEDTVKLISAEGFEFIVDKNAAMVSQTIRNMLTSPGGFAETEHREVTFPEISTTILEK 271
           M+KEDTVKLISAEGFEF++DK AAMVSQTIRNMLTSPG FAET+H EVTFPEISTTILEK
Sbjct: 1   MRKEDTVKLISAEGFEFVIDKEAAMVSQTIRNMLTSPGSFAETQHGEVTFPEISTTILEK 60

Query: 272 ICQYFYWSLQYASGKETEFHIEPELTLELMMAANY 376
           ICQYFYWSLQYA GKETEF IEPELTLELMMAANY
Sbjct: 61  ICQYFYWSLQYAKGKETEFPIEPELTLELMMAANY 95


>ref|XP_002314149.1| predicted protein [Populus trichocarpa] gi|222850557|gb|EEE88104.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score =  176 bits (445), Expect = 5e-42
 Identities = 86/95 (90%), Positives = 90/95 (94%)
 Frame = +2

Query: 92  MKKEDTVKLISAEGFEFIVDKNAAMVSQTIRNMLTSPGGFAETEHREVTFPEISTTILEK 271
           M+KEDTVKLISAEGFEF++ K AAMVSQTIRNMLTSPG FAETEH EVTFPEISTTILEK
Sbjct: 1   MRKEDTVKLISAEGFEFVIHKEAAMVSQTIRNMLTSPGSFAETEHGEVTFPEISTTILEK 60

Query: 272 ICQYFYWSLQYASGKETEFHIEPELTLELMMAANY 376
           ICQYFYWSLQYA+GKETEF IEPELTLELMMAANY
Sbjct: 61  ICQYFYWSLQYANGKETEFPIEPELTLELMMAANY 95


>ref|XP_002282124.1| PREDICTED: transcription elongation factor B polypeptide 1 [Vitis
           vinifera]
          Length = 98

 Score =  174 bits (442), Expect = 1e-41
 Identities = 85/95 (89%), Positives = 90/95 (94%)
 Frame = +2

Query: 92  MKKEDTVKLISAEGFEFIVDKNAAMVSQTIRNMLTSPGGFAETEHREVTFPEISTTILEK 271
           M+KEDTVKLISAEGFEF++DK AAMVSQTIRNMLTSPG FAE EH EVTFPEISTTILEK
Sbjct: 1   MRKEDTVKLISAEGFEFVIDKRAAMVSQTIRNMLTSPGSFAEREHGEVTFPEISTTILEK 60

Query: 272 ICQYFYWSLQYASGKETEFHIEPELTLELMMAANY 376
           ICQYFYWSLQ+ASGK+TEF IEPELTLELMMAANY
Sbjct: 61  ICQYFYWSLQFASGKDTEFPIEPELTLELMMAANY 95


>ref|XP_004145280.1| PREDICTED: transcription elongation factor B polypeptide 1-like
           [Cucumis sativus] gi|449474021|ref|XP_004154051.1|
           PREDICTED: transcription elongation factor B polypeptide
           1-like [Cucumis sativus]
           gi|449508510|ref|XP_004163332.1| PREDICTED:
           transcription elongation factor B polypeptide 1-like
           [Cucumis sativus]
          Length = 98

 Score =  174 bits (440), Expect = 2e-41
 Identities = 84/95 (88%), Positives = 92/95 (96%)
 Frame = +2

Query: 92  MKKEDTVKLISAEGFEFIVDKNAAMVSQTIRNMLTSPGGFAETEHREVTFPEISTTILEK 271
           MKKEDTVKLISAEGFEF++ K+AAMVSQTIRNMLTSPG FAE++HREVTFPEISTTILEK
Sbjct: 1   MKKEDTVKLISAEGFEFVIHKDAAMVSQTIRNMLTSPGNFAESQHREVTFPEISTTILEK 60

Query: 272 ICQYFYWSLQYASGKETEFHIEPELTLELMMAANY 376
           ICQYF+W+LQ+ASGKETEF IEPELTLELMMAANY
Sbjct: 61  ICQYFHWNLQFASGKETEFPIEPELTLELMMAANY 95


>ref|NP_001235513.1| uncharacterized protein LOC100305702 [Glycine max]
           gi|255626357|gb|ACU13523.1| unknown [Glycine max]
          Length = 98

 Score =  172 bits (436), Expect = 5e-41
 Identities = 85/95 (89%), Positives = 88/95 (92%)
 Frame = +2

Query: 92  MKKEDTVKLISAEGFEFIVDKNAAMVSQTIRNMLTSPGGFAETEHREVTFPEISTTILEK 271
           MKKEDTVKLISAEGFEF+VDK AAMVSQTI NMLTSPG FAE +H EVTFPEISTTILEK
Sbjct: 1   MKKEDTVKLISAEGFEFVVDKEAAMVSQTIHNMLTSPGSFAERQHGEVTFPEISTTILEK 60

Query: 272 ICQYFYWSLQYASGKETEFHIEPELTLELMMAANY 376
           ICQYFYW LQ+ASGKETEF IEPELTLELMMAANY
Sbjct: 61  ICQYFYWHLQFASGKETEFPIEPELTLELMMAANY 95


Top