BLASTX nr result

ID: Atractylodes21_contig00013206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013206
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264470.1| PREDICTED: RING finger protein 170 [Vitis vi...   193   4e-62
ref|XP_002325966.1| predicted protein [Populus trichocarpa] gi|2...   194   5e-61
ref|XP_002327279.1| predicted protein [Populus trichocarpa] gi|2...   192   3e-60
gb|AFK34661.1| unknown [Lotus japonicus]                              184   7e-60
ref|NP_564172.1| C3HC4-type RING finger protein [Arabidopsis tha...   181   5e-58

>ref|XP_002264470.1| PREDICTED: RING finger protein 170 [Vitis vinifera]
           gi|296089528|emb|CBI39347.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score =  193 bits (491), Expect(2) = 4e-62
 Identities = 87/130 (66%), Positives = 102/130 (78%)
 Frame = -1

Query: 818 DGPPGNDFCSICHGNFHIPHQANCSHWYCGNCILQVWNHGSALQPCRCPLCRREITLLVP 639
           +GPP ND CS+CHG F+IP QANCSHW+CGNCIL VW HGSALQPC+CPLCRR+ITLLVP
Sbjct: 3   EGPPANDVCSVCHGGFNIPFQANCSHWFCGNCILLVWQHGSALQPCKCPLCRRQITLLVP 62

Query: 638 SQASSLQVHDPEASEILKRIEAYNRLFGSQSTGLSQRVQDLPXXXXXXXRELMDPQRSLP 459
           + AS  Q +DPE S I+ R+E YNRLFG   + L QR++DLP       RELMDPQRSLP
Sbjct: 63  AGASQRQCNDPEVSAIVGRVERYNRLFGRCDSSLFQRMRDLPFLLRRLLRELMDPQRSLP 122

Query: 458 FVIKARVYLA 429
            +I+ARVY A
Sbjct: 123 LLIRARVYFA 132



 Score = 72.0 bits (175), Expect(2) = 4e-62
 Identities = 31/51 (60%), Positives = 43/51 (84%)
 Frame = -2

Query: 391 LISTAIYVLSPVDIIPEALFGILGLLDDFIIALIFFLHVGTLYRAILVRRY 239
           ++++ IY++SPVDIIPE + GILGLLDDFIIA I FLH+  +YR++LV R+
Sbjct: 133 MLTSIIYIVSPVDIIPEGVVGILGLLDDFIIAFICFLHIAAIYRSVLVHRH 183


>ref|XP_002325966.1| predicted protein [Populus trichocarpa] gi|222862841|gb|EEF00348.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  194 bits (493), Expect(2) = 5e-61
 Identities = 86/131 (65%), Positives = 106/131 (80%)
 Frame = -1

Query: 821 MDGPPGNDFCSICHGNFHIPHQANCSHWYCGNCILQVWNHGSALQPCRCPLCRREITLLV 642
           MDGPP NDFCSICHG+F+I  QANCSHW+CG+CI+ VW+HGS LQPC+CPLCRR+ITLLV
Sbjct: 1   MDGPPVNDFCSICHGHFNIACQANCSHWFCGDCIMLVWHHGSVLQPCKCPLCRRQITLLV 60

Query: 641 PSQASSLQVHDPEASEILKRIEAYNRLFGSQSTGLSQRVQDLPXXXXXXXRELMDPQRSL 462
           P +AS  +  DP+ +E+L +IE YN LFG  ++GL QR+QDLP       RE+MDPQRSL
Sbjct: 61  PGEASLRERSDPDVAEVLGKIERYNHLFGGNTSGLIQRMQDLPFLLRRLLREIMDPQRSL 120

Query: 461 PFVIKARVYLA 429
           P VI+ARVY+A
Sbjct: 121 PLVIRARVYIA 131



 Score = 67.4 bits (163), Expect(2) = 5e-61
 Identities = 29/51 (56%), Positives = 41/51 (80%)
 Frame = -2

Query: 391 LISTAIYVLSPVDIIPEALFGILGLLDDFIIALIFFLHVGTLYRAILVRRY 239
           ++ +AIYV+SP+DIIPE + GI+GLLDD ++ LI FLHV  +YRA+L  R+
Sbjct: 132 VVLSAIYVISPIDIIPEGILGIVGLLDDLLVVLICFLHVAAIYRAVLHYRH 182


>ref|XP_002327279.1| predicted protein [Populus trichocarpa] gi|222835649|gb|EEE74084.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  192 bits (487), Expect(2) = 3e-60
 Identities = 85/131 (64%), Positives = 105/131 (80%)
 Frame = -1

Query: 821 MDGPPGNDFCSICHGNFHIPHQANCSHWYCGNCILQVWNHGSALQPCRCPLCRREITLLV 642
           MDGPPGND C+ICHG+F+I  QANCSHW+CG+CI+ VW+HGS LQPC+CPLCRR+ITLLV
Sbjct: 1   MDGPPGNDCCAICHGHFNIACQANCSHWFCGDCIMLVWHHGSVLQPCKCPLCRRQITLLV 60

Query: 641 PSQASSLQVHDPEASEILKRIEAYNRLFGSQSTGLSQRVQDLPXXXXXXXRELMDPQRSL 462
           P +AS  + +DP  +E+L +IE YN LFG  ++ L QR+QDLP       RE+MDPQRSL
Sbjct: 61  PGEASLRERNDPHVAEVLGKIERYNHLFGGNTSSLVQRMQDLPFLLRRLLREIMDPQRSL 120

Query: 461 PFVIKARVYLA 429
           P VIKARVY+A
Sbjct: 121 PVVIKARVYIA 131



 Score = 67.4 bits (163), Expect(2) = 3e-60
 Identities = 28/51 (54%), Positives = 41/51 (80%)
 Frame = -2

Query: 391 LISTAIYVLSPVDIIPEALFGILGLLDDFIIALIFFLHVGTLYRAILVRRY 239
           ++ +A+Y++SPVDIIPE + GI+GLLDD +I LI FLHV  +YR++L  R+
Sbjct: 132 MVLSAVYIISPVDIIPEGILGIVGLLDDLLIVLICFLHVAAIYRSVLYYRH 182


>gb|AFK34661.1| unknown [Lotus japonicus]
          Length = 188

 Score =  184 bits (467), Expect(2) = 7e-60
 Identities = 82/131 (62%), Positives = 102/131 (77%), Gaps = 1/131 (0%)
 Frame = -1

Query: 818 DGPPGNDFCSICHGNFHIPHQANCSHWYCGNCILQVWNHGSALQPCRCPLCRREITLLVP 639
           +GPP ND CS+CHGNFHIP QANCSHW+C NCI+ VWNHGSA+QPC+CPLCRR ITLLVP
Sbjct: 4   EGPPLNDLCSVCHGNFHIPCQANCSHWFCANCIMLVWNHGSAIQPCKCPLCRRPITLLVP 63

Query: 638 S-QASSLQVHDPEASEILKRIEAYNRLFGSQSTGLSQRVQDLPXXXXXXXRELMDPQRSL 462
           + Q S+    +PE + +L +I+ YNR FG++S+G  QR+ DLP       RE +DPQRSL
Sbjct: 64  TEQDSASHRQEPEVAHVLSQIQTYNRFFGARSSGPLQRMLDLPFLLRRLAREFLDPQRSL 123

Query: 461 PFVIKARVYLA 429
           P VI+ARVY+A
Sbjct: 124 PLVIRARVYIA 134



 Score = 73.6 bits (179), Expect(2) = 7e-60
 Identities = 32/51 (62%), Positives = 43/51 (84%)
 Frame = -2

Query: 391 LISTAIYVLSPVDIIPEALFGILGLLDDFIIALIFFLHVGTLYRAILVRRY 239
           +I +AIYV SP+DIIPE ++G++GLLDD +I LIFFLHV  LYR++L RR+
Sbjct: 135 MIISAIYVFSPIDIIPEGIWGVVGLLDDLLIMLIFFLHVAALYRSVLYRRH 185


>ref|NP_564172.1| C3HC4-type RING finger protein [Arabidopsis thaliana]
           gi|110740529|dbj|BAE98370.1| hypothetical protein
           [Arabidopsis thaliana] gi|332192128|gb|AEE30249.1|
           C3HC4-type RING finger protein [Arabidopsis thaliana]
          Length = 185

 Score =  181 bits (458), Expect(2) = 5e-58
 Identities = 79/131 (60%), Positives = 101/131 (77%)
 Frame = -1

Query: 821 MDGPPGNDFCSICHGNFHIPHQANCSHWYCGNCILQVWNHGSALQPCRCPLCRREITLLV 642
           M+ PP N+ CSICHG+F+ P Q+NCSHW+CGNCI+ VW HGS L+PC+CPLCRR I+LLV
Sbjct: 1   MNAPPENELCSICHGHFNAPCQSNCSHWFCGNCIMLVWRHGSTLRPCKCPLCRRPISLLV 60

Query: 641 PSQASSLQVHDPEASEILKRIEAYNRLFGSQSTGLSQRVQDLPXXXXXXXRELMDPQRSL 462
           PS+ +    +D   SE+L  +E YNR+FG QS+GL QR+QDLP       RE+MDPQR+L
Sbjct: 61  PSEETVRSRNDATVSEVLHDVETYNRVFGGQSSGLIQRMQDLPFLLRRLLREMMDPQRTL 120

Query: 461 PFVIKARVYLA 429
           P VI+ARVY+A
Sbjct: 121 PLVIRARVYIA 131



 Score = 70.9 bits (172), Expect(2) = 5e-58
 Identities = 31/51 (60%), Positives = 42/51 (82%)
 Frame = -2

Query: 391 LISTAIYVLSPVDIIPEALFGILGLLDDFIIALIFFLHVGTLYRAILVRRY 239
           LI +AIY++SP+DIIPE + G++GLLDD +IALI FLHV  LYR++L  R+
Sbjct: 132 LILSAIYIISPIDIIPEGVLGVIGLLDDLLIALICFLHVAALYRSVLYSRH 182


Top