BLASTX nr result

ID: Atractylodes21_contig00013085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013085
         (1384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310331.1| predicted protein [Populus trichocarpa] gi|2...   436   e-120
ref|XP_002525297.1| GTP-binding protein engB, putative [Ricinus ...   434   e-119
ref|NP_565543.1| GTP-binding protein [Arabidopsis thaliana] gi|2...   422   e-115
ref|XP_002878640.1| EMB2001 [Arabidopsis lyrata subsp. lyrata] g...   420   e-115
ref|XP_002886010.1| EMB2001 [Arabidopsis lyrata subsp. lyrata] g...   417   e-114

>ref|XP_002310331.1| predicted protein [Populus trichocarpa] gi|222853234|gb|EEE90781.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  436 bits (1120), Expect = e-120
 Identities = 207/259 (79%), Positives = 235/259 (90%), Gaps = 1/259 (0%)
 Frame = +2

Query: 161 PPHYVSATKTPKIS-ISDTAKFIRTVLFIPPGTDPEEVTDDMILPGSNIVLGPYVGDAKV 337
           P  +VSA+KT K   +SD A+F+RTVLF+PPG DP++VT+++ILPGSNIV+GPY G +++
Sbjct: 43  PSGHVSASKTSKPPPLSDVARFVRTVLFVPPGVDPDKVTEEIILPGSNIVVGPYAGHSQI 102

Query: 338 KEVEFMGSSIRPKDCPKDDRPEFAMLGRSNVGKSSLINSLVRKKEVALTSKKPGKTQLIN 517
           KEVEF+ SS R KDCP+DDRPEFA+LGRSNVGKSSLIN L RKKEVALTSKKPGKTQLIN
Sbjct: 103 KEVEFVKSSGRAKDCPRDDRPEFAILGRSNVGKSSLINVLARKKEVALTSKKPGKTQLIN 162

Query: 518 HFLVNKSWYLVDLPGYGFANAPESARMDWSSFTKGYFLNRESLVGVLLLVDASVPPKKID 697
           HFLVNKSWYLVDLPGYGFA AP+SARMDWSSFTKGYFLNRE+LV VLLL+DASVPP+KID
Sbjct: 163 HFLVNKSWYLVDLPGYGFAKAPDSARMDWSSFTKGYFLNRETLVAVLLLIDASVPPQKID 222

Query: 698 LDCANWLGRNNIPMTIVFTKCDKMKNSKGQRPDENIKSFQELIKENYKIHPPWIMTSSAT 877
           LDCANWLGRNNIPMT+VFTKCDKMK  K  RPDENIK+FQEL+++NY+ HP WIMTSS T
Sbjct: 223 LDCANWLGRNNIPMTLVFTKCDKMKGGKRTRPDENIKNFQELMRQNYREHPAWIMTSSVT 282

Query: 878 GLGRDELLLHMSQLRNYWD 934
           GLGRDELLLHMSQLRNYWD
Sbjct: 283 GLGRDELLLHMSQLRNYWD 301


>ref|XP_002525297.1| GTP-binding protein engB, putative [Ricinus communis]
           gi|223535455|gb|EEF37125.1| GTP-binding protein engB,
           putative [Ricinus communis]
          Length = 296

 Score =  434 bits (1115), Expect = e-119
 Identities = 203/260 (78%), Positives = 235/260 (90%)
 Frame = +2

Query: 155 SAPPHYVSATKTPKISISDTAKFIRTVLFIPPGTDPEEVTDDMILPGSNIVLGPYVGDAK 334
           S+P    SA+KT K S +D+A+F RTVLF+PPG DP+EVT++M+LPGSNIV+GPY G ++
Sbjct: 36  SSPHPKFSASKTAKPSTADSARFARTVLFVPPGVDPDEVTENMVLPGSNIVVGPYAGHSQ 95

Query: 335 VKEVEFMGSSIRPKDCPKDDRPEFAMLGRSNVGKSSLINSLVRKKEVALTSKKPGKTQLI 514
           +KEVEF+ SS R +DCP++DRPEFA+LGRSNVGKSSLIN+LVRKKEVALTSKKPGKTQLI
Sbjct: 96  IKEVEFVKSSSRARDCPREDRPEFAILGRSNVGKSSLINALVRKKEVALTSKKPGKTQLI 155

Query: 515 NHFLVNKSWYLVDLPGYGFANAPESARMDWSSFTKGYFLNRESLVGVLLLVDASVPPKKI 694
           NHFLVNKSWY+VDLPGYGFA AP SA+ DWSSFTKGYFLNRE+LV VLLL+DASVPP+KI
Sbjct: 156 NHFLVNKSWYIVDLPGYGFAKAPASAQTDWSSFTKGYFLNRETLVAVLLLIDASVPPQKI 215

Query: 695 DLDCANWLGRNNIPMTIVFTKCDKMKNSKGQRPDENIKSFQELIKENYKIHPPWIMTSSA 874
           DLDCA+WLGRNNIP+T VFTKCDKMK  K  RPDENI++FQELI++NY+ HPPWIMTSS 
Sbjct: 216 DLDCADWLGRNNIPLTFVFTKCDKMKGGKSTRPDENIRNFQELIRQNYQEHPPWIMTSSV 275

Query: 875 TGLGRDELLLHMSQLRNYWD 934
           TGLGRDELLLHMSQLRNYWD
Sbjct: 276 TGLGRDELLLHMSQLRNYWD 295


>ref|NP_565543.1| GTP-binding protein [Arabidopsis thaliana]
           gi|21903474|sp|O81004.2|Y2287_ARATH RecName:
           Full=GTP-binding protein At2g22870; AltName:
           Full=Protein EMBRYO DEFECTIVE 2001
           gi|20197273|gb|AAC32434.2| putative nucleotide-binding
           protein [Arabidopsis thaliana]
           gi|21592880|gb|AAM64830.1| putative nucleotide-binding
           protein [Arabidopsis thaliana]
           gi|52354269|gb|AAU44455.1| hypothetical protein
           AT2G22870 [Arabidopsis thaliana]
           gi|55740571|gb|AAV63878.1| hypothetical protein
           At2g22870 [Arabidopsis thaliana]
           gi|330252273|gb|AEC07367.1| GTP-binding protein
           [Arabidopsis thaliana]
          Length = 300

 Score =  422 bits (1084), Expect = e-115
 Identities = 195/251 (77%), Positives = 227/251 (90%)
 Frame = +2

Query: 182 TKTPKISISDTAKFIRTVLFIPPGTDPEEVTDDMILPGSNIVLGPYVGDAKVKEVEFMGS 361
           T T   SISD  KF ++VLFIPPG + EE+TDDM+LPGSNIV+GP+ G +++KEVEF+ S
Sbjct: 49  TTTTNRSISDATKFAKSVLFIPPGVEIEELTDDMVLPGSNIVIGPFAGHSQIKEVEFVKS 108

Query: 362 SIRPKDCPKDDRPEFAMLGRSNVGKSSLINSLVRKKEVALTSKKPGKTQLINHFLVNKSW 541
           S R +DCPKDDRPE A+LGRSNVGKSSLIN LVRKKEVALTSKKPGKTQLINHFLVNKSW
Sbjct: 109 SARARDCPKDDRPEIAILGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLINHFLVNKSW 168

Query: 542 YLVDLPGYGFANAPESARMDWSSFTKGYFLNRESLVGVLLLVDASVPPKKIDLDCANWLG 721
           Y+VDLPGYGFA   ++A+ DWS+FTKGYFLNR+SLV VLLL+DASVPP+KIDLDCANWLG
Sbjct: 169 YIVDLPGYGFAKVSDAAKTDWSAFTKGYFLNRDSLVCVLLLIDASVPPQKIDLDCANWLG 228

Query: 722 RNNIPMTIVFTKCDKMKNSKGQRPDENIKSFQELIKENYKIHPPWIMTSSATGLGRDELL 901
           RNN+PMT VFTKCDKMK +KG+RPDENIK+FQ++I+EN+K+HPPWI+TSS +GLGRDELL
Sbjct: 229 RNNVPMTFVFTKCDKMKATKGKRPDENIKAFQQIIRENFKVHPPWILTSSVSGLGRDELL 288

Query: 902 LHMSQLRNYWD 934
           LHMSQLRNYWD
Sbjct: 289 LHMSQLRNYWD 299


>ref|XP_002878640.1| EMB2001 [Arabidopsis lyrata subsp. lyrata]
           gi|297324479|gb|EFH54899.1| EMB2001 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 300

 Score =  420 bits (1080), Expect = e-115
 Identities = 193/249 (77%), Positives = 227/249 (91%)
 Frame = +2

Query: 188 TPKISISDTAKFIRTVLFIPPGTDPEEVTDDMILPGSNIVLGPYVGDAKVKEVEFMGSSI 367
           T   SISD AKF ++VLFIPPG + EE+TDDM+LPGSNIV+GP+ G +++KEVEF+ SS 
Sbjct: 51  TTNRSISDAAKFAKSVLFIPPGVEIEELTDDMVLPGSNIVIGPFAGHSQIKEVEFVKSSA 110

Query: 368 RPKDCPKDDRPEFAMLGRSNVGKSSLINSLVRKKEVALTSKKPGKTQLINHFLVNKSWYL 547
           R +DCPKDDRPE A+LGRSNVGKSSLIN LVRKKEVALTSKKPGKTQLINHFLVNKSWY+
Sbjct: 111 RARDCPKDDRPEIAILGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLINHFLVNKSWYI 170

Query: 548 VDLPGYGFANAPESARMDWSSFTKGYFLNRESLVGVLLLVDASVPPKKIDLDCANWLGRN 727
           VDLPGYGFA   ++A+ DWS+FTKGYFLNR++LV +LLL+DASVPP+KIDLDCANWLGRN
Sbjct: 171 VDLPGYGFAKVSDAAKTDWSAFTKGYFLNRDTLVCILLLIDASVPPQKIDLDCANWLGRN 230

Query: 728 NIPMTIVFTKCDKMKNSKGQRPDENIKSFQELIKENYKIHPPWIMTSSATGLGRDELLLH 907
           N+PMT VFTKCDKMK +KG+RPDENIK+FQ++I+EN+K+HPPWI+TSS +GLGRDELLLH
Sbjct: 231 NVPMTFVFTKCDKMKAAKGKRPDENIKAFQQIIRENFKVHPPWILTSSVSGLGRDELLLH 290

Query: 908 MSQLRNYWD 934
           MSQLRNYWD
Sbjct: 291 MSQLRNYWD 299


>ref|XP_002886010.1| EMB2001 [Arabidopsis lyrata subsp. lyrata]
           gi|297331850|gb|EFH62269.1| EMB2001 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 300

 Score =  417 bits (1072), Expect = e-114
 Identities = 194/251 (77%), Positives = 226/251 (90%)
 Frame = +2

Query: 182 TKTPKISISDTAKFIRTVLFIPPGTDPEEVTDDMILPGSNIVLGPYVGDAKVKEVEFMGS 361
           T T   SISD AKF ++VLFIPPG + EE+TDDM+LPGSNIV+GP+ G +++KEVEF+ S
Sbjct: 49  TPTTNRSISDAAKFAKSVLFIPPGVEIEELTDDMVLPGSNIVIGPFAGHSQIKEVEFVKS 108

Query: 362 SIRPKDCPKDDRPEFAMLGRSNVGKSSLINSLVRKKEVALTSKKPGKTQLINHFLVNKSW 541
           S R +DC KDDRPE A+LGRSNVGKSSLIN LVRKKEVALTSKKPGKTQLINHFLVNKSW
Sbjct: 109 SARARDCTKDDRPEIAILGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLINHFLVNKSW 168

Query: 542 YLVDLPGYGFANAPESARMDWSSFTKGYFLNRESLVGVLLLVDASVPPKKIDLDCANWLG 721
           Y+VDLPGYGFA   ++A+ DWS+FTKGYFLNR++LV VLLL+DASVPP+KIDLDCANWLG
Sbjct: 169 YIVDLPGYGFAKVSDAAKTDWSAFTKGYFLNRDTLVCVLLLIDASVPPQKIDLDCANWLG 228

Query: 722 RNNIPMTIVFTKCDKMKNSKGQRPDENIKSFQELIKENYKIHPPWIMTSSATGLGRDELL 901
           RNN+ MT VFTKCDKMK +KG+RPDENIK+FQ++IKEN+K+HPPWI+TSS +GLGRDELL
Sbjct: 229 RNNVQMTFVFTKCDKMKATKGKRPDENIKAFQQIIKENFKVHPPWILTSSVSGLGRDELL 288

Query: 902 LHMSQLRNYWD 934
           LHMSQLRNYWD
Sbjct: 289 LHMSQLRNYWD 299


Top