BLASTX nr result

ID: Atractylodes21_contig00013069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013069
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]             119   3e-25
ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|...   116   2e-24
ref|XP_004139098.1| PREDICTED: endoribonuclease Dicer homolog 2-...   115   4e-24
ref|NP_566199.4| protein dicer-like 2 [Arabidopsis thaliana] gi|...   115   4e-24
ref|NP_001078101.1| protein dicer-like 2 [Arabidopsis thaliana] ...   115   4e-24

>gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
          Length = 1403

 Score =  119 bits (298), Expect = 3e-25
 Identities = 63/151 (41%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
 Frame = -1

Query: 531  QIILSNQFQITVLSLLLDHKITKLVKYFETKKGTNDDVVRDYLLLPSNGL--HSVIDWKS 358
            +++   +FQ+++  +LLD  ++KL       +      V DYLLLPS G   +  I+W+ 
Sbjct: 741  EVLRCQRFQVSLFRILLDRDLSKLEDALAAVQLPVGSAVSDYLLLPSLGSTQNPQINWEC 800

Query: 357  VRSVMFPFERAGNEHMNISLSGDNHHLVHTKNGLVCSCLVENSLVCTPHNGRVYCTTKRL 178
            V SV+FP +  G++H++   +      V+TK G+VCSC++ENSLVCTPHNG VYC T  L
Sbjct: 801  VNSVLFPSQVLGDKHIDCCSTQGRKRSVNTKTGVVCSCMLENSLVCTPHNGYVYCITGFL 860

Query: 177  VGLNGKSSLQIREGEVITYKKYYKTRYGLYL 85
              L+  S L+ R GE ITY +YYK R+ + L
Sbjct: 861  DNLDCNSLLEQRTGESITYIEYYKKRHRINL 891


>ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|222864159|gb|EEF01290.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1408

 Score =  116 bits (291), Expect = 2e-24
 Identities = 67/159 (42%), Positives = 98/159 (61%), Gaps = 3/159 (1%)
 Frame = -1

Query: 528  IILSNQFQITVLSLLLDHKITKLVKYFE-TKKGTNDDVVRDYLLLPSNGLHSV--IDWKS 358
            ++L  +FQIT+  +L+  ++ KL +  +  + GT   VV DY LLP+    S   IDW+ 
Sbjct: 743  VLLCRRFQITLFEVLIHREVNKLEEVLKGLELGTG--VVMDYFLLPAIRSRSQPSIDWEP 800

Query: 357  VRSVMFPFERAGNEHMNISLSGDNHHLVHTKNGLVCSCLVENSLVCTPHNGRVYCTTKRL 178
            + SV+F ++    +H N S  G N H+VHTK G VC+C+++NSLVCTPHNG VY  T   
Sbjct: 801  ISSVLFSYKN--EDHFNCSSKG-NAHVVHTKGGPVCTCVLQNSLVCTPHNGNVYFITGAS 857

Query: 177  VGLNGKSSLQIREGEVITYKKYYKTRYGLYLVNSLLLIF 61
              LNG+S L++R G  ITYK+++  R      NS+ L+F
Sbjct: 858  EDLNGRSLLKLRNGSAITYKEHFAKRR-----NSIQLLF 891


>ref|XP_004139098.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
          Length = 1393

 Score =  115 bits (288), Expect = 4e-24
 Identities = 71/150 (47%), Positives = 93/150 (62%), Gaps = 1/150 (0%)
 Frame = -1

Query: 531  QIILSNQFQITVLSLLLDHKIT-KLVKYFETKKGTNDDVVRDYLLLPSNGLHSVIDWKSV 355
            Q++LS QFQ T+  +LL+H  T KL +  E   G    V  DYLLLPS G   +I W+ V
Sbjct: 735  QVLLSRQFQRTIFKVLLNHTWTNKLSENNEICLGDGPRV--DYLLLPSTG-GELISWEIV 791

Query: 354  RSVMFPFERAGNEHMNISLSGDNHHLVHTKNGLVCSCLVENSLVCTPHNGRVYCTTKRLV 175
             SV+   +     H  IS S D  + V TK+GLVC C ++NS+V TPHNG VYC T  L 
Sbjct: 792  LSVLVSSQEYC-VHRGISSSKDVSYDVPTKSGLVCICRLQNSVVYTPHNGHVYCITSVLS 850

Query: 174  GLNGKSSLQIREGEVITYKKYYKTRYGLYL 85
             LNG S L+IR+ E++ YK+YYK R+G+ L
Sbjct: 851  ELNGNSLLKIRKNEMMAYKEYYKVRHGIDL 880


>ref|NP_566199.4| protein dicer-like 2 [Arabidopsis thaliana]
            gi|334185051|ref|NP_001189798.1| protein dicer-like 2
            [Arabidopsis thaliana]
            gi|322518659|sp|Q3EBC8.2|DCL2_ARATH RecName:
            Full=Endoribonuclease Dicer homolog 2; AltName:
            Full=Dicer-like protein 2; Short=AtDCL2
            gi|332640403|gb|AEE73924.1| protein dicer-like 2
            [Arabidopsis thaliana] gi|332640405|gb|AEE73926.1|
            protein dicer-like 2 [Arabidopsis thaliana]
          Length = 1388

 Score =  115 bits (288), Expect = 4e-24
 Identities = 65/153 (42%), Positives = 92/153 (60%), Gaps = 4/153 (2%)
 Frame = -1

Query: 531  QIILSNQFQITVLSLLLDHKITKLVKYFETKKGTN--DDVVRDYLLLPSNGLH--SVIDW 364
            +++   +FQIT+  +LLDH +  L+   E   G +  D V  DYLL+PS   H  S+IDW
Sbjct: 740  EVLFCRRFQITLFRVLLDHSVENLM---EALNGLHLRDGVALDYLLVPSTHSHETSLIDW 796

Query: 363  KSVRSVMFPFERAGNEHMNISLSGDNHHLVHTKNGLVCSCLVENSLVCTPHNGRVYCTTK 184
            + +RSV         +H N S +G +  ++HTK+GL C+C+V+N+LV TPHNG VYCT  
Sbjct: 797  EVIRSVNLTSHEVLEKHENCSTNGASR-ILHTKDGLFCTCVVQNALVYTPHNGYVYCTKG 855

Query: 183  RLVGLNGKSSLQIREGEVITYKKYYKTRYGLYL 85
             L  LNG S L  R     TY +YY+ R+G+ L
Sbjct: 856  VLNNLNGNSLLTKRNSGDQTYIEYYEERHGIQL 888


>ref|NP_001078101.1| protein dicer-like 2 [Arabidopsis thaliana]
            gi|332640404|gb|AEE73925.1| protein dicer-like 2
            [Arabidopsis thaliana]
          Length = 1374

 Score =  115 bits (288), Expect = 4e-24
 Identities = 65/153 (42%), Positives = 92/153 (60%), Gaps = 4/153 (2%)
 Frame = -1

Query: 531  QIILSNQFQITVLSLLLDHKITKLVKYFETKKGTN--DDVVRDYLLLPSNGLH--SVIDW 364
            +++   +FQIT+  +LLDH +  L+   E   G +  D V  DYLL+PS   H  S+IDW
Sbjct: 726  EVLFCRRFQITLFRVLLDHSVENLM---EALNGLHLRDGVALDYLLVPSTHSHETSLIDW 782

Query: 363  KSVRSVMFPFERAGNEHMNISLSGDNHHLVHTKNGLVCSCLVENSLVCTPHNGRVYCTTK 184
            + +RSV         +H N S +G +  ++HTK+GL C+C+V+N+LV TPHNG VYCT  
Sbjct: 783  EVIRSVNLTSHEVLEKHENCSTNGASR-ILHTKDGLFCTCVVQNALVYTPHNGYVYCTKG 841

Query: 183  RLVGLNGKSSLQIREGEVITYKKYYKTRYGLYL 85
             L  LNG S L  R     TY +YY+ R+G+ L
Sbjct: 842  VLNNLNGNSLLTKRNSGDQTYIEYYEERHGIQL 874


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