BLASTX nr result

ID: Atractylodes21_contig00012996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012996
         (971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322111.1| predicted protein [Populus trichocarpa] gi|2...    63   1e-07
ref|XP_003529680.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    62   2e-07
emb|CBI38032.3| unnamed protein product [Vitis vinifera]               62   2e-07
ref|XP_003551050.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    62   3e-07
ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    60   8e-07

>ref|XP_002322111.1| predicted protein [Populus trichocarpa] gi|222869107|gb|EEF06238.1|
           predicted protein [Populus trichocarpa]
          Length = 710

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 30/50 (60%), Positives = 39/50 (78%)
 Frame = -1

Query: 206 MKRSTDDIGEKLQAKKPVFLTKAEREQLALKRRQDEVDEEKRRSEQRLLQ 57
           MKRS DDIG      KPVFLTKA+REQLAL+RRQ+E++++K+R +  L Q
Sbjct: 1   MKRSFDDIGVSKTQSKPVFLTKAQREQLALQRRQEEIEQQKKRQQLLLSQ 50


>ref|XP_003529680.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Glycine
           max]
          Length = 701

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = -1

Query: 206 MKRSTDDIGEKLQAKKPVFLTKAEREQLALKRRQDEVDEEKRRSEQRL 63
           MKRS DD+   +   KPVFLTKA+REQLAL+RR ++V ++KRR EQ L
Sbjct: 1   MKRSNDDVAAPVSTAKPVFLTKAQREQLALQRRHEDVADQKRRQEQLL 48


>emb|CBI38032.3| unnamed protein product [Vitis vinifera]
          Length = 797

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 32/58 (55%), Positives = 43/58 (74%), Gaps = 6/58 (10%)
 Frame = -1

Query: 212 SAMKRSTDD------IGEKLQAKKPVFLTKAEREQLALKRRQDEVDEEKRRSEQRLLQ 57
           +AMKRS ++      +      KKPVFLTKA+REQLAL+RR +E+ E+KRR+EQ+LLQ
Sbjct: 45  AAMKRSIEEDISTTIVSAATNMKKPVFLTKAQREQLALQRRHEEIAEQKRRAEQQLLQ 102


>ref|XP_003551050.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 1
           [Glycine max] gi|356565649|ref|XP_003551051.1|
           PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like
           isoform 2 [Glycine max]
          Length = 706

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 32/50 (64%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
 Frame = -1

Query: 206 MKRSTDDIGEKLQAK--KPVFLTKAEREQLALKRRQDEVDEEKRRSEQRL 63
           MKRS DD+   + A   KPVFLTKA+REQLAL+RRQ+EV ++KRR EQ L
Sbjct: 1   MKRSNDDVAAPVPASTSKPVFLTKAQREQLALQRRQEEVADQKRRQEQLL 50


>ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
           vinifera]
          Length = 712

 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = -1

Query: 197 STDDIGEKLQAKKPVFLTKAEREQLALKRRQDEVDEEKRRSEQRLLQ 57
           ST  +      KKPVFLTKA+REQLAL+RR +E+ E+KRR+EQ+LLQ
Sbjct: 10  STTIVSAATNMKKPVFLTKAQREQLALQRRHEEIAEQKRRAEQQLLQ 56


Top