BLASTX nr result

ID: Atractylodes21_contig00012964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012964
         (1257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273686.1| PREDICTED: COP9 signalosome complex subunit ...   341   e-107
ref|XP_004140517.1| PREDICTED: COP9 signalosome complex subunit ...   342   e-105
ref|XP_003633896.1| PREDICTED: COP9 signalosome complex subunit ...   380   e-103
gb|ABK94750.1| unknown [Populus trichocarpa]                          321   e-101
ref|XP_003542787.1| PREDICTED: COP9 signalosome complex subunit ...   318   2e-98

>ref|XP_002273686.1| PREDICTED: COP9 signalosome complex subunit 7 isoform 1 [Vitis
            vinifera] gi|297734611|emb|CBI16662.3| unnamed protein
            product [Vitis vinifera]
          Length = 259

 Score =  341 bits (874), Expect(2) = e-107
 Identities = 170/223 (76%), Positives = 190/223 (85%)
 Frame = -2

Query: 1118 MDIEQKQEELINHFVKQASTFQGSSLATVITEATSHPSLFAFSEILSVPNVIQLQRTGHS 939
            MDIEQ+Q ELI+ FVKQAST  GS+LATVI +ATSHPSLFAFSEIL+VPNV++L  T +S
Sbjct: 1    MDIEQRQAELIDAFVKQASTHNGSALATVILDATSHPSLFAFSEILAVPNVVELGGTENS 60

Query: 938  IYLDLLRMFAHGTWSEYKSNASNLPPLAPDXXXXXXXXXXXXLAETNKVLPYDVLMQELD 759
            +YLD+LR+FAHGTWS+YKSN   LP L PD            LAETNKVLPYD LMQELD
Sbjct: 61   VYLDMLRLFAHGTWSDYKSNVDRLPQLVPDQALKLKQLTVLTLAETNKVLPYDQLMQELD 120

Query: 758  VVNVRELEDFLINECMYVGIVRGKLDQLQRCFQVQFAAGRDLRPGQLGSMIHTLSNWLST 579
            V NVRELEDFLINECMY GIVRGKLDQL+RCF+VQFAAGRDLRPGQLG MI TLSNWL T
Sbjct: 121  VTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGCMIQTLSNWLGT 180

Query: 578  SDNLLISIQEKIKWADTMSELDKKHKKEADERMEEVKKALSLK 450
            SDNLL+SIQEKIKWADTMSELDKKH+KE +ER+EEVKK+ S+K
Sbjct: 181  SDNLLLSIQEKIKWADTMSELDKKHRKEVEERVEEVKKSFSVK 223



 Score = 74.3 bits (181), Expect(2) = e-107
 Identities = 31/36 (86%), Positives = 36/36 (100%)
 Frame = -1

Query: 432 QADIDFRGHEEMFSEPGGVMDYDEDRSRPKRRRHPL 325
           +ADIDFRGHEE++SEPGGVMDY+EDRSRPKRRRHP+
Sbjct: 223 KADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPI 258


>ref|XP_004140517.1| PREDICTED: COP9 signalosome complex subunit 7-like [Cucumis sativus]
            gi|449514708|ref|XP_004164457.1| PREDICTED: COP9
            signalosome complex subunit 7-like [Cucumis sativus]
          Length = 259

 Score =  342 bits (877), Expect(2) = e-105
 Identities = 168/223 (75%), Positives = 195/223 (87%)
 Frame = -2

Query: 1118 MDIEQKQEELINHFVKQASTFQGSSLATVITEATSHPSLFAFSEILSVPNVIQLQRTGHS 939
            MDIEQKQ E I+HFVKQAS+ +GS+L +V+T+ATSHPSLFAFSEIL+VPNV++L+ T HS
Sbjct: 1    MDIEQKQTEFIDHFVKQASSLKGSALGSVVTDATSHPSLFAFSEILAVPNVVELEGTEHS 60

Query: 938  IYLDLLRMFAHGTWSEYKSNASNLPPLAPDXXXXXXXXXXXXLAETNKVLPYDVLMQELD 759
            IYLD+LR+FA+GTWS+YKSN+S LP L+ D            LAETNKVL YD LMQELD
Sbjct: 61   IYLDVLRLFAYGTWSDYKSNSSRLPELSSDQALKLKQLTVLTLAETNKVLAYDQLMQELD 120

Query: 758  VVNVRELEDFLINECMYVGIVRGKLDQLQRCFQVQFAAGRDLRPGQLGSMIHTLSNWLST 579
            V NVRELEDFLINECMY GIVRGKLDQL+RCF+VQFAAGRDLRPGQLG+MI TLSNWL+T
Sbjct: 121  VTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMIRTLSNWLTT 180

Query: 578  SDNLLISIQEKIKWADTMSELDKKHKKEADERMEEVKKALSLK 450
            SDNLL+SIQEKIKWAD MSELDKKH+K+ D+R+EEVKK+LSLK
Sbjct: 181  SDNLLVSIQEKIKWADNMSELDKKHRKDVDDRVEEVKKSLSLK 223



 Score = 67.0 bits (162), Expect(2) = e-105
 Identities = 28/36 (77%), Positives = 34/36 (94%)
 Frame = -1

Query: 432 QADIDFRGHEEMFSEPGGVMDYDEDRSRPKRRRHPL 325
           +A+ID R HEE++SEPGGVMDY+EDRSRPKRRRHP+
Sbjct: 223 KANIDIREHEEIYSEPGGVMDYEEDRSRPKRRRHPI 258


>ref|XP_003633896.1| PREDICTED: COP9 signalosome complex subunit 7 isoform 2 [Vitis
            vinifera]
          Length = 247

 Score =  380 bits (975), Expect = e-103
 Identities = 191/247 (77%), Positives = 212/247 (85%)
 Frame = -2

Query: 1118 MDIEQKQEELINHFVKQASTFQGSSLATVITEATSHPSLFAFSEILSVPNVIQLQRTGHS 939
            MDIEQ+Q ELI+ FVKQAST  GS+LATVI +ATSHPSLFAFSEIL+VPNV++L  T +S
Sbjct: 1    MDIEQRQAELIDAFVKQASTHNGSALATVILDATSHPSLFAFSEILAVPNVVELGGTENS 60

Query: 938  IYLDLLRMFAHGTWSEYKSNASNLPPLAPDXXXXXXXXXXXXLAETNKVLPYDVLMQELD 759
            +YLD+LR+FAHGTWS+YKSN   LP L PD            LAETNKVLPYD LMQELD
Sbjct: 61   VYLDMLRLFAHGTWSDYKSNVDRLPQLVPDQALKLKQLTVLTLAETNKVLPYDQLMQELD 120

Query: 758  VVNVRELEDFLINECMYVGIVRGKLDQLQRCFQVQFAAGRDLRPGQLGSMIHTLSNWLST 579
            V NVRELEDFLINECMY GIVRGKLDQL+RCF+VQFAAGRDLRPGQLG MI TLSNWL T
Sbjct: 121  VTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGCMIQTLSNWLGT 180

Query: 578  SDNLLISIQEKIKWADTMSELDKKHKKEADERMEEVKKALSLKKLQTVSRPTLTSEGTRR 399
            SDNLL+SIQEKIKWADTMSELDKKH+KE +ER+EEVKK+ S+KKL TVSRPTLTSEGTRR
Sbjct: 181  SDNLLLSIQEKIKWADTMSELDKKHRKEVEERVEEVKKSFSVKKLHTVSRPTLTSEGTRR 240

Query: 398  CSLNLVE 378
             +LNLVE
Sbjct: 241  STLNLVE 247


>gb|ABK94750.1| unknown [Populus trichocarpa]
          Length = 259

 Score =  321 bits (822), Expect(2) = e-101
 Identities = 162/223 (72%), Positives = 184/223 (82%)
 Frame = -2

Query: 1118 MDIEQKQEELINHFVKQASTFQGSSLATVITEATSHPSLFAFSEILSVPNVIQLQRTGHS 939
            MDIEQKQ ELI+HFV QAST + S+L  +I EATSHPSLFAFSEILS P V +L+ T +S
Sbjct: 1    MDIEQKQAELIDHFVNQASTLKASALWPLIIEATSHPSLFAFSEILSSPTVSELEGTENS 60

Query: 938  IYLDLLRMFAHGTWSEYKSNASNLPPLAPDXXXXXXXXXXXXLAETNKVLPYDVLMQELD 759
              LD+LR+FAHGTWS+YKSNA  LP L PD            LAE NKVLPYD LMQELD
Sbjct: 61   FCLDVLRLFAHGTWSDYKSNAGRLPQLVPDQVLKLKQLTVLTLAEMNKVLPYDQLMQELD 120

Query: 758  VVNVRELEDFLINECMYVGIVRGKLDQLQRCFQVQFAAGRDLRPGQLGSMIHTLSNWLST 579
            V NVRELEDFLINECMY GIVRGKLDQL+RCF+VQFAAGRDLRPGQLG+M+ TLSNWL T
Sbjct: 121  VTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMLQTLSNWLDT 180

Query: 578  SDNLLISIQEKIKWADTMSELDKKHKKEADERMEEVKKALSLK 450
            SD+LL+SIQEKIKWAD+ SELDKKH+K+ + R+EEVKK+LSLK
Sbjct: 181  SDDLLVSIQEKIKWADSTSELDKKHQKDVEYRVEEVKKSLSLK 223



 Score = 74.3 bits (181), Expect(2) = e-101
 Identities = 31/36 (86%), Positives = 36/36 (100%)
 Frame = -1

Query: 432 QADIDFRGHEEMFSEPGGVMDYDEDRSRPKRRRHPL 325
           +ADIDFRGHEE++SEPGGVMDY+EDRSRPKRRRHP+
Sbjct: 223 KADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPI 258


>ref|XP_003542787.1| PREDICTED: COP9 signalosome complex subunit 7-like [Glycine max]
          Length = 259

 Score =  318 bits (814), Expect(2) = 2e-98
 Identities = 156/221 (70%), Positives = 187/221 (84%), Gaps = 1/221 (0%)
 Frame = -2

Query: 1118 MDIEQKQEELINHFVKQASTFQ-GSSLATVITEATSHPSLFAFSEILSVPNVIQLQRTGH 942
            MDIEQKQ ELI+HFVK+AS     ++L++V+ EATSHPSLFAFSEIL++PN++QL+ T +
Sbjct: 1    MDIEQKQSELIDHFVKRASAASDAAALSSVLVEATSHPSLFAFSEILALPNLLQLEATEN 60

Query: 941  SIYLDLLRMFAHGTWSEYKSNASNLPPLAPDXXXXXXXXXXXXLAETNKVLPYDVLMQEL 762
            S YLD+LR+FAHGTW++YKSNA  LP L PD            LAET KVLPYD LMQEL
Sbjct: 61   SAYLDMLRLFAHGTWNDYKSNADRLPQLIPDQILKLKQLTVLTLAETYKVLPYDQLMQEL 120

Query: 761  DVVNVRELEDFLINECMYVGIVRGKLDQLQRCFQVQFAAGRDLRPGQLGSMIHTLSNWLS 582
            DV NVRELEDFLINECMY GIVRGKLDQL+RCF+VQFAAGRDLRP QLG+MI TLSNWLS
Sbjct: 121  DVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPDQLGNMIQTLSNWLS 180

Query: 581  TSDNLLISIQEKIKWADTMSELDKKHKKEADERMEEVKKAL 459
            TS+N+L+SIQEKIKWAD MSE+DKKH+K+ +E++EEVKK++
Sbjct: 181  TSENMLVSIQEKIKWADAMSEIDKKHRKDVEEKVEEVKKSI 221



 Score = 69.3 bits (168), Expect(2) = 2e-98
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = -1

Query: 432 QADIDFRGHEEMFSEPGGVMDYDEDRSRPKRRRHPL 325
           +ADIDFRGHEE+ SE GGVMDY+EDRSRPKRRRHP+
Sbjct: 223 KADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPI 258