BLASTX nr result
ID: Atractylodes21_contig00012927
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00012927 (281 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia... 69 9e-18 dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 67 1e-17 dbj|BAM44535.1| polyprotein [Arabidopsis thaliana] 67 1e-17 dbj|BAM44534.1| polyprotein [Arabidopsis thaliana] 67 1e-17 dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] 67 1e-17 >emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana] gi|7268438|emb|CAB80958.1| retrotransposon like protein [Arabidopsis thaliana] Length = 1474 Score = 69.3 bits (168), Expect(2) = 9e-18 Identities = 30/61 (49%), Positives = 39/61 (63%) Frame = +1 Query: 97 YLKGMTYHGXXXXXXXXXXXXAFTNADWGGDKDNYISTTGYLVYLGRNPISWSIKKQCAV 276 YL G + HG AF++ADW GD D+Y+ST Y++YLG+NPISWS KKQ V Sbjct: 1298 YLAGTSTHGIFLDTTSPLNLHAFSDADWAGDSDDYVSTNAYVIYLGKNPISWSSKKQRGV 1357 Query: 277 S 279 + Sbjct: 1358 A 1358 Score = 45.4 bits (106), Expect(2) = 9e-18 Identities = 19/32 (59%), Positives = 24/32 (75%) Frame = +3 Query: 3 SFSRPDVAYVVNKLSQYMQWPTESQWVALKRL 98 +F+RPD+AY VN+LSQ M PTE W A KR+ Sbjct: 1264 AFTRPDIAYAVNRLSQLMPQPTEDHWQAAKRV 1295 >dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] Length = 1475 Score = 66.6 bits (161), Expect(2) = 1e-17 Identities = 30/60 (50%), Positives = 37/60 (61%) Frame = +1 Query: 97 YLKGMTYHGXXXXXXXXXXXXAFTNADWGGDKDNYISTTGYLVYLGRNPISWSIKKQCAV 276 YL G HG A+++ADW GD D+Y+ST GY+VYLG +PISWS KKQ V Sbjct: 1292 YLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGV 1351 Score = 47.8 bits (112), Expect(2) = 1e-17 Identities = 19/32 (59%), Positives = 26/32 (81%) Frame = +3 Query: 3 SFSRPDVAYVVNKLSQYMQWPTESQWVALKRL 98 +F+RPD++Y VN+LSQYM PT+ W ALKR+ Sbjct: 1258 AFTRPDLSYAVNRLSQYMHMPTDDNWNALKRV 1289 >dbj|BAM44535.1| polyprotein [Arabidopsis thaliana] Length = 1475 Score = 66.6 bits (161), Expect(2) = 1e-17 Identities = 30/60 (50%), Positives = 37/60 (61%) Frame = +1 Query: 97 YLKGMTYHGXXXXXXXXXXXXAFTNADWGGDKDNYISTTGYLVYLGRNPISWSIKKQCAV 276 YL G HG A+++ADW GD D+Y+ST GY+VYLG +PISWS KKQ V Sbjct: 1292 YLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGV 1351 Score = 47.8 bits (112), Expect(2) = 1e-17 Identities = 19/32 (59%), Positives = 26/32 (81%) Frame = +3 Query: 3 SFSRPDVAYVVNKLSQYMQWPTESQWVALKRL 98 +F+RPD++Y VN+LSQYM PT+ W ALKR+ Sbjct: 1258 AFTRPDLSYAVNRLSQYMHMPTDDHWNALKRV 1289 >dbj|BAM44534.1| polyprotein [Arabidopsis thaliana] Length = 1475 Score = 66.6 bits (161), Expect(2) = 1e-17 Identities = 30/60 (50%), Positives = 37/60 (61%) Frame = +1 Query: 97 YLKGMTYHGXXXXXXXXXXXXAFTNADWGGDKDNYISTTGYLVYLGRNPISWSIKKQCAV 276 YL G HG A+++ADW GD D+Y+ST GY+VYLG +PISWS KKQ V Sbjct: 1292 YLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGV 1351 Score = 47.8 bits (112), Expect(2) = 1e-17 Identities = 19/32 (59%), Positives = 26/32 (81%) Frame = +3 Query: 3 SFSRPDVAYVVNKLSQYMQWPTESQWVALKRL 98 +F+RPD++Y VN+LSQYM PT+ W ALKR+ Sbjct: 1258 AFTRPDLSYAVNRLSQYMHMPTDDHWNALKRV 1289 >dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] Length = 1475 Score = 66.6 bits (161), Expect(2) = 1e-17 Identities = 30/60 (50%), Positives = 37/60 (61%) Frame = +1 Query: 97 YLKGMTYHGXXXXXXXXXXXXAFTNADWGGDKDNYISTTGYLVYLGRNPISWSIKKQCAV 276 YL G HG A+++ADW GD D+Y+ST GY+VYLG +PISWS KKQ V Sbjct: 1292 YLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGV 1351 Score = 47.8 bits (112), Expect(2) = 1e-17 Identities = 19/32 (59%), Positives = 26/32 (81%) Frame = +3 Query: 3 SFSRPDVAYVVNKLSQYMQWPTESQWVALKRL 98 +F+RPD++Y VN+LSQYM PT+ W ALKR+ Sbjct: 1258 AFTRPDLSYAVNRLSQYMHMPTDDHWNALKRV 1289