BLASTX nr result

ID: Atractylodes21_contig00012927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012927
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia...    69   9e-18
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]                     67   1e-17
dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]                     67   1e-17
dbj|BAM44534.1| polyprotein [Arabidopsis thaliana]                     67   1e-17
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]                     67   1e-17

>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
            gi|7268438|emb|CAB80958.1| retrotransposon like protein
            [Arabidopsis thaliana]
          Length = 1474

 Score = 69.3 bits (168), Expect(2) = 9e-18
 Identities = 30/61 (49%), Positives = 39/61 (63%)
 Frame = +1

Query: 97   YLKGMTYHGXXXXXXXXXXXXAFTNADWGGDKDNYISTTGYLVYLGRNPISWSIKKQCAV 276
            YL G + HG            AF++ADW GD D+Y+ST  Y++YLG+NPISWS KKQ  V
Sbjct: 1298 YLAGTSTHGIFLDTTSPLNLHAFSDADWAGDSDDYVSTNAYVIYLGKNPISWSSKKQRGV 1357

Query: 277  S 279
            +
Sbjct: 1358 A 1358



 Score = 45.4 bits (106), Expect(2) = 9e-18
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = +3

Query: 3    SFSRPDVAYVVNKLSQYMQWPTESQWVALKRL 98
            +F+RPD+AY VN+LSQ M  PTE  W A KR+
Sbjct: 1264 AFTRPDIAYAVNRLSQLMPQPTEDHWQAAKRV 1295


>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score = 66.6 bits (161), Expect(2) = 1e-17
 Identities = 30/60 (50%), Positives = 37/60 (61%)
 Frame = +1

Query: 97   YLKGMTYHGXXXXXXXXXXXXAFTNADWGGDKDNYISTTGYLVYLGRNPISWSIKKQCAV 276
            YL G   HG            A+++ADW GD D+Y+ST GY+VYLG +PISWS KKQ  V
Sbjct: 1292 YLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGV 1351



 Score = 47.8 bits (112), Expect(2) = 1e-17
 Identities = 19/32 (59%), Positives = 26/32 (81%)
 Frame = +3

Query: 3    SFSRPDVAYVVNKLSQYMQWPTESQWVALKRL 98
            +F+RPD++Y VN+LSQYM  PT+  W ALKR+
Sbjct: 1258 AFTRPDLSYAVNRLSQYMHMPTDDNWNALKRV 1289


>dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score = 66.6 bits (161), Expect(2) = 1e-17
 Identities = 30/60 (50%), Positives = 37/60 (61%)
 Frame = +1

Query: 97   YLKGMTYHGXXXXXXXXXXXXAFTNADWGGDKDNYISTTGYLVYLGRNPISWSIKKQCAV 276
            YL G   HG            A+++ADW GD D+Y+ST GY+VYLG +PISWS KKQ  V
Sbjct: 1292 YLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGV 1351



 Score = 47.8 bits (112), Expect(2) = 1e-17
 Identities = 19/32 (59%), Positives = 26/32 (81%)
 Frame = +3

Query: 3    SFSRPDVAYVVNKLSQYMQWPTESQWVALKRL 98
            +F+RPD++Y VN+LSQYM  PT+  W ALKR+
Sbjct: 1258 AFTRPDLSYAVNRLSQYMHMPTDDHWNALKRV 1289


>dbj|BAM44534.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score = 66.6 bits (161), Expect(2) = 1e-17
 Identities = 30/60 (50%), Positives = 37/60 (61%)
 Frame = +1

Query: 97   YLKGMTYHGXXXXXXXXXXXXAFTNADWGGDKDNYISTTGYLVYLGRNPISWSIKKQCAV 276
            YL G   HG            A+++ADW GD D+Y+ST GY+VYLG +PISWS KKQ  V
Sbjct: 1292 YLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGV 1351



 Score = 47.8 bits (112), Expect(2) = 1e-17
 Identities = 19/32 (59%), Positives = 26/32 (81%)
 Frame = +3

Query: 3    SFSRPDVAYVVNKLSQYMQWPTESQWVALKRL 98
            +F+RPD++Y VN+LSQYM  PT+  W ALKR+
Sbjct: 1258 AFTRPDLSYAVNRLSQYMHMPTDDHWNALKRV 1289


>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score = 66.6 bits (161), Expect(2) = 1e-17
 Identities = 30/60 (50%), Positives = 37/60 (61%)
 Frame = +1

Query: 97   YLKGMTYHGXXXXXXXXXXXXAFTNADWGGDKDNYISTTGYLVYLGRNPISWSIKKQCAV 276
            YL G   HG            A+++ADW GD D+Y+ST GY+VYLG +PISWS KKQ  V
Sbjct: 1292 YLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGV 1351



 Score = 47.8 bits (112), Expect(2) = 1e-17
 Identities = 19/32 (59%), Positives = 26/32 (81%)
 Frame = +3

Query: 3    SFSRPDVAYVVNKLSQYMQWPTESQWVALKRL 98
            +F+RPD++Y VN+LSQYM  PT+  W ALKR+
Sbjct: 1258 AFTRPDLSYAVNRLSQYMHMPTDDHWNALKRV 1289


Top