BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012887
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_068728.1| putative coat protein [Soybean chlorotic mottle...    80   7e-13
ref|XP_003619554.1| Capsid protein [Medicago truncatula] gi|3554...    69   2e-09
gb|AEH95572.1| coat protein [Blueberry red ringspot virus]             68   2e-09
ref|NP_395468.1| putative coat protein [Blueberry red ringspot v...    67   4e-09
gb|AEE01491.1| coat protein [Blueberry red ringspot virus]             67   6e-09

>ref|NP_068728.1| putative coat protein [Soybean chlorotic mottle virus]
           gi|18266819|sp|P15627.2|CAPSD_SOCMV RecName: Full=Capsid
           protein; Short=CP; AltName: Full=Coat protein
           gi|11322952|emb|CAC16944.1| putative coat protein
           [Soybean chlorotic mottle virus]
          Length = 441

 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 10/248 (4%)
 Frame = +1

Query: 79  DTTESLEDRIETLTSLIKNLNILDEENVHTI-------KKEEDEEVDVICDYSTDDENPF 237
           +T + L  +++ L +L+  +N+ D +    I       ++ E E  + I D+S++++  F
Sbjct: 3   ETQQELTQQLKELETLMAAINLDDSKKKQPIYQNSSESEESETENKNFIYDFSSEED--F 60

Query: 238 NNPYNNYGVKRNQSTRDEETRSQYVYGPPSLDEERLYRQGIIKNRNTGKWTKIPESYIPK 417
             P     VK  +       R          D+   + +         K+ KIP+ Y+P 
Sbjct: 61  EEPVK---VKIEEEAETSNKRK--------FDKNPEFTRF--------KYQKIPKEYVPA 101

Query: 418 ISVMTPNSEILDLDRITNVEDRIQEWGNQMGIQIQLTEELSKLQPRELFSYMIHKTNGNV 597
               T    +LD+D + N E  I+EW N   I I + EEL  L   + F Y+++KT G  
Sbjct: 102 HQT-TSTIGVLDIDCVANTEKIIKEWFNHHSILITINEELKNLSSLDTFYYLVYKTRGIA 160

Query: 598 YRFLESLTDEEKAIILSENALT---TFNNLLTKILDEFVRKDPNNEKSKTAFKQTAYWHL 768
           + +L +L  E  + I ++        +N LL + +    R +     S+ AF Q  Y+ L
Sbjct: 161 HAYLSNLPSEVLSRIPADRKQVDDWVYNLLLREFVGRLERPE-----SEEAFSQNNYYKL 215

Query: 769 NNLRICNM 792
            NL ICNM
Sbjct: 216 INLEICNM 223


>ref|XP_003619554.1| Capsid protein [Medicago truncatula] gi|355494569|gb|AES75772.1|
           Capsid protein [Medicago truncatula]
          Length = 306

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 44/158 (27%), Positives = 84/158 (53%), Gaps = 4/158 (2%)
 Frame = +1

Query: 331 DEERLYRQGIIKNRNTGKWTKIPESYIPKISVMTPNSEILDLDRITNVEDRIQEWGNQMG 510
           + E + R+G    R  GKWTKI + + P       + ++L+LD + N E+ ++ W N M 
Sbjct: 23  ENETVNRRGY--TRANGKWTKISDEFKPHYEE-GKSKKLLNLDCVRNPEEILERWSNNMI 79

Query: 511 IQIQLTEELSKLQPRELFSYMIHKTNGNVYRFLESLTDE--EKAIILSENALTTFNNLLT 684
           + ++  ++ SK+   ++ + + ++T  NV + L S+ DE  ++   ++EN       ++ 
Sbjct: 80  MLLETDDKFSKVNLMDVKNLLAYRTTWNVLKKLTSIEDETWQQYARMTENNQQFAKLIIE 139

Query: 685 KILDEFVRKDPNNEKSKT--AFKQTAYWHLNNLRICNM 792
            I  EF+  +    K+K     ++ A  HLNN++ICNM
Sbjct: 140 LIYKEFIWFNILEHKAKVNKQLRERAKAHLNNMQICNM 177


>gb|AEH95572.1| coat protein [Blueberry red ringspot virus]
          Length = 495

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 14/249 (5%)
 Frame = +1

Query: 88  ESLEDRIETLTSLIKNLNILDEENVHTIKKEEDEEVDVICDYSTDDENPFNNPYNNYGVK 267
           E ++ +IE + +++ NL I   E    I   E E  D   D   DD            VK
Sbjct: 13  EMIDQQIEEIRNIMNNLKIEKTEENEIIFGNESENSDY--DVRMDD------------VK 58

Query: 268 RNQSTRDEETR------SQYVYGPPSLD-----EERLYRQGIIKNRNTGKWTKIPESYIP 414
           +   T + E R      S Y Y P + D     E+  Y++G  KNR  GKW K  E   P
Sbjct: 59  QEPGTSNFEERWKRKRNSNYEYEPYNTDPFINAEDYGYKRGFYKNRE-GKWKKPKE---P 114

Query: 415 KISVMTPNSEILDLDRITNVEDRIQEWGNQMGIQIQLTEELSKLQPRELFSYMIHKTNGN 594
                     IL+LD +TN E+ +++W  +  +  Q+   +  +       Y+I+KT+G 
Sbjct: 115 GPVTGRLEDGILNLDCLTNGEELLKQWTAKQSLSTQIDATIRDMDAENYNKYLIYKTSGV 174

Query: 595 VYRFLESLTDEEKAIILSENALTTFNNLLTKILDEFVRKDPNNEKSKTAFK---QTAYWH 765
           V+ +   + D +   I S   L     + TKI  EF+    + +++  A K   +   + 
Sbjct: 175 VFNY---IVDIDIPNISSMKNLEILEEIATKIYQEFL-GGMSTQRATAADKHDQERVKYI 230

Query: 766 LNNLRICNM 792
           L+ ++IC+M
Sbjct: 231 LHKMKICDM 239


>ref|NP_395468.1| putative coat protein [Blueberry red ringspot virus]
           gi|16033535|gb|AAL13273.1|AF404509_3 putative coat
           protein [Blueberry red ringspot virus]
          Length = 486

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 5/241 (2%)
 Frame = +1

Query: 85  TESLEDRIETLTSLIKNLNILDEENVHTIKKEEDEEVDVICDYSTDD--ENPFNNPYNNY 258
           +++++ +IE + +++ NL I   E    I   E E  D   D   DD  E P  + +   
Sbjct: 3   SDNIDQQIEEIRNIMNNLKIEKTEENEIIFGNESENSDY--DVRMDDVKEEPGTSNFEER 60

Query: 259 GVKRNQSTRDEETRSQYVYGPPSLDEERLYRQGIIKNRNTGKWTKIPESYIPKISVMTPN 438
             ++   T + E    Y   P    E+  Y++G  KNR  GKW K  E   P        
Sbjct: 61  WKRKRNPTYEYEP---YHTDPFINAEDYGYKRGFYKNRQ-GKWKKPKE---PGPVTGRLE 113

Query: 439 SEILDLDRITNVEDRIQEWGNQMGIQIQLTEELSKLQPRELFSYMIHKTNGNVYRFLESL 618
             IL+LD +TN E+ +++W  +  +  Q+   +  +       Y+I+KT+G V+ +   +
Sbjct: 114 DGILNLDCLTNGEELLKQWTAKQSLSTQIDATIRDMDAENYNKYLIYKTSGVVFNY---I 170

Query: 619 TDEEKAIILSENALTTFNNLLTKILDEFVRKDPNNEKSKTAFK---QTAYWHLNNLRICN 789
            D +   I S   L     + TKI  EF+    + +++  A K   +   + L+ ++IC+
Sbjct: 171 VDIDIPNISSMKNLEILEEIATKIYQEFL-GGMSTQRATAADKHDQERVKYILHKMKICD 229

Query: 790 M 792
           M
Sbjct: 230 M 230


>gb|AEE01491.1| coat protein [Blueberry red ringspot virus]
          Length = 491

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 14/249 (5%)
 Frame = +1

Query: 88  ESLEDRIETLTSLIKNLNILDEENVHTIKKEEDEEVDVICDYSTDDENPFNNPYNNYGVK 267
           E ++ +IE + +++ NL I   E    I   E E  D   D   DD            +K
Sbjct: 10  EMIDQQIEEIRNIMNNLKIEKTEENEIIFGNESENSDY--DVRMDD------------IK 55

Query: 268 RNQSTRDEETR------SQYVYGPPSLD-----EERLYRQGIIKNRNTGKWTKIPESYIP 414
           +   T + E R      S Y Y P + D     E+  Y++G  KNR  GKW K P+   P
Sbjct: 56  QEPGTSNFEERWKRKRNSNYEYEPYNTDPFINAEDYGYKRGFYKNRE-GKW-KRPKESGP 113

Query: 415 KISVMTPNSEILDLDRITNVEDRIQEWGNQMGIQIQLTEELSKLQPRELFSYMIHKTNGN 594
               +  +  IL+LD +TN E+ +++W  +  +  Q+   +  +       Y+I+KT+G 
Sbjct: 114 VTGRL--DDGILNLDCLTNGEELLKQWTAKQSLSTQIDASIRDMDAENYNKYLIYKTSGV 171

Query: 595 VYRFLESLTDEEKAIILSENALTTFNNLLTKILDEFVRKDPNNEKSKTAFK---QTAYWH 765
           V+ +   + D +   I S   L     + T+I  EF+    + +++  A K   +   + 
Sbjct: 172 VFNY---IVDIDIPNISSMKNLEILEEIATRIYQEFL-GGMSTQRATAADKHDQERVKYI 227

Query: 766 LNNLRICNM 792
           L+ ++IC+M
Sbjct: 228 LHKMKICDM 236