BLASTX nr result

ID: Atractylodes21_contig00012709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012709
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    79   5e-13
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    75   4e-12
emb|CAN65491.1| hypothetical protein VITISV_003157 [Vitis vinifera]    74   1e-11
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    74   2e-11
ref|XP_004164098.1| PREDICTED: uncharacterized protein LOC101232...    73   3e-11

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 45/91 (49%), Positives = 57/91 (62%), Gaps = 6/91 (6%)
 Frame = -1

Query: 256 ELQHRRQQGLCYRCGEKYGSGHRCKKKELSMLVLLENKEGMEDNQGDAMEN------EGS 95
           ELQ++R+ GLC+RC EK+  GHRCKKKELS+L+     E  E+  G  MEN      + S
Sbjct: 341 ELQYKREHGLCFRCDEKWAIGHRCKKKELSILL---GHEEEEEEYGSLMENIQPAHPDDS 397

Query: 94  TLAYLDREEAIGASLNSVVGFSTPKTMKMEG 2
            L     E     SLNSV+G S+PKT+KMEG
Sbjct: 398 QLEIHSPE----ISLNSVMGISSPKTLKMEG 424


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/88 (47%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
 Frame = -1

Query: 256 ELQHRRQQGLCYRCGEKYGSGHRCKKKELSMLVLLENKEGMEDNQGDAMEN--EGSTLAY 83
           ELQ +R +GLC++C EK+G GH+C++KELS+L        MEDN+ D +E    GS    
Sbjct: 407 ELQEKRAKGLCFKCDEKWGVGHQCRRKELSVLF-------MEDNEEDELEGALSGSEAPP 459

Query: 82  LDREE-AIGASLNSVVGFSTPKTMKMEG 2
              EE     SLNSV+G S PKTMK+ G
Sbjct: 460 SPTEEIPPEVSLNSVIGLSNPKTMKLSG 487


>emb|CAN65491.1| hypothetical protein VITISV_003157 [Vitis vinifera]
          Length = 1242

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 41/85 (48%), Positives = 60/85 (70%)
 Frame = -1

Query: 256 ELQHRRQQGLCYRCGEKYGSGHRCKKKELSMLVLLENKEGMEDNQGDAMENEGSTLAYLD 77
           ELQ RR++G+C++C EK+  GHRC KKEL +L++ E+ E  EDNQ D  E      + ++
Sbjct: 185 ELQARREKGICFKCDEKFSLGHRC-KKELRVLLVHED-EREEDNQFD--ERATMEPSLIE 240

Query: 76  REEAIGASLNSVVGFSTPKTMKMEG 2
            ++A+  SLNSVVG +TP TMK++G
Sbjct: 241 LKDAMELSLNSVVGLTTPGTMKIKG 265


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/85 (48%), Positives = 60/85 (70%)
 Frame = -1

Query: 256  ELQHRRQQGLCYRCGEKYGSGHRCKKKELSMLVLLENKEGMEDNQGDAMENEGSTLAYLD 77
            ELQ RR++GL ++C EK+  GHRC KKEL +L++ E++E  +DNQ D    E   L  ++
Sbjct: 983  ELQARREKGLWFKCEEKFSPGHRC-KKELRVLLVHEDEE-EDDNQFDDRATEEPAL--IE 1038

Query: 76   REEAIGASLNSVVGFSTPKTMKMEG 2
             ++A+  SLNSVVG +TP TMK++G
Sbjct: 1039 LKDAVELSLNSVVGLTTPGTMKIKG 1063


>ref|XP_004164098.1| PREDICTED: uncharacterized protein LOC101232566 [Cucumis sativus]
          Length = 707

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 5/90 (5%)
 Frame = -1

Query: 256 ELQHRRQQGLCYRCGEKYGSGHRCKKK---ELSMLVLLENKEGMEDNQGDAMENEGSTLA 86
           E Q R+++GLC+RC EKY   H+CK K   EL MLV++   E  E  + + +E +  ++A
Sbjct: 326 EFQSRKEKGLCFRCNEKYSHDHKCKMKEQRELRMLVVMGENEEYEIIEEEEVEQKELSVA 385

Query: 85  YLDREE--AIGASLNSVVGFSTPKTMKMEG 2
            + +EE   +  S+NSVVG S P+TMK++G
Sbjct: 386 EVIQEEHAVVELSINSVVGLSNPRTMKVKG 415


Top