BLASTX nr result

ID: Atractylodes21_contig00012682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012682
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...    98   8e-19
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]    94   1e-17
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    93   3e-17
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    92   4e-17
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]    91   7e-17

>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/83 (56%), Positives = 62/83 (74%)
 Frame = -1

Query: 249 QQSSTVCPITNFVSYDKFSDSHKAFLTAITSNDEPKKFEQAVQNQEWRDAMQREIKALEE 70
           Q +S++ P++++VS D FS  HKAFL AIT+NDEPK F++AV+ + W DAM +E+ ALE 
Sbjct: 605 QGTSSLYPLSDYVSDDCFSAGHKAFLAAITANDEPKHFKEAVRIKVWNDAMFKEVDALEI 664

Query: 69  NGTWTIEDLPDGKRPIDSKWVYK 1
           N TW I DLP GK  I S+WVYK
Sbjct: 665 NKTWDIVDLPPGKVAIGSQWVYK 687


>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
          Length = 1191

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 40/81 (49%), Positives = 61/81 (75%)
 Frame = -1

Query: 243 SSTVCPITNFVSYDKFSDSHKAFLTAITSNDEPKKFEQAVQNQEWRDAMQREIKALEENG 64
           SST  PI ++++ D FS  ++ FL AI S+++PK F++A+++  W+ +M  EI+ALEENG
Sbjct: 632 SSTPYPIAHYINCDNFSVHYRKFLAAIISSNDPKSFKEAMKDVSWQKSMHEEIRALEENG 691

Query: 63  TWTIEDLPDGKRPIDSKWVYK 1
           TWT+E LP GKR + S+WVY+
Sbjct: 692 TWTLEXLPKGKRALGSQWVYR 712


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 43/82 (52%), Positives = 58/82 (70%)
 Frame = -1

Query: 246  QSSTVCPITNFVSYDKFSDSHKAFLTAITSNDEPKKFEQAVQNQEWRDAMQREIKALEEN 67
            Q ++  P+T+++  + FS  HK FL AIT+NDEPK F++AV+ + W DAM +E+ ALE N
Sbjct: 949  QGNSQYPLTDYIFDECFSAGHKVFLAAITANDEPKHFKEAVKVKVWNDAMYKEVDALEVN 1008

Query: 66   GTWTIEDLPDGKRPIDSKWVYK 1
             TW I DLP GK  I S+WVYK
Sbjct: 1009 KTWDIVDLPTGKVAIGSQWVYK 1030


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/82 (52%), Positives = 57/82 (69%)
 Frame = -1

Query: 246  QSSTVCPITNFVSYDKFSDSHKAFLTAITSNDEPKKFEQAVQNQEWRDAMQREIKALEEN 67
            Q +   P+T+++S + FS  HK FL AIT+NDEPK F++ V+ + W DAM +E+ ALE N
Sbjct: 949  QGNLQYPLTDYISDECFSAGHKVFLAAITANDEPKHFKEDVKVKVWNDAMYKEVDALEVN 1008

Query: 66   GTWTIEDLPDGKRPIDSKWVYK 1
             TW I DLP GK  I S+WVYK
Sbjct: 1009 KTWDIVDLPTGKVAIGSQWVYK 1030


>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
          Length = 1059

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 38/82 (46%), Positives = 55/82 (67%)
 Frame = -1

Query: 246  QSSTVCPITNFVSYDKFSDSHKAFLTAITSNDEPKKFEQAVQNQEWRDAMQREIKALEEN 67
            Q ST  P+ NFVSY  +S  H++F TA++ + EP  + +A  +  W++AMQ E+ ALE N
Sbjct: 894  QKSTCYPLCNFVSYHHYSPQHRSFTTAVSQDIEPTSYAEAASHSHWQEAMQSELAALEAN 953

Query: 66   GTWTIEDLPDGKRPIDSKWVYK 1
             TW++  LP GK+PI  +WVYK
Sbjct: 954  HTWSLTSLPPGKKPIGCRWVYK 975


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