BLASTX nr result

ID: Atractylodes21_contig00012667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012667
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299478.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
gb|ACF40836.1| endo-beta-1,4-glucanase, partial [Manilkara zapota]    127   1e-27
gb|AFZ78640.1| korrigan [Populus tomentosa]                           125   3e-27
gb|AFZ78641.1| korrigan [Populus tomentosa]                           124   6e-27
ref|XP_002303645.1| glycosyl hydrolase family 9 [Populus trichoc...   124   6e-27

>ref|XP_002299478.1| predicted protein [Populus trichocarpa] gi|222846736|gb|EEE84283.1|
           predicted protein [Populus trichocarpa]
           gi|347466587|gb|AEO97206.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466641|gb|AEO97233.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
          Length = 622

 Score =  127 bits (318), Expect = 1e-27
 Identities = 58/68 (85%), Positives = 62/68 (91%)
 Frame = +3

Query: 3   WDVKYAGVQTLVAKFLMGGKARGHAPVFGKYQEKAEFFMCSCLGKSSHNVRKTPGGLIFR 182
           WDVKYAGVQTLVAKFLM GKA  HAPVF KYQ+KAE+FMCSCLGK S NV+KTPGGLIFR
Sbjct: 278 WDVKYAGVQTLVAKFLMQGKAGHHAPVFEKYQQKAEYFMCSCLGKGSRNVQKTPGGLIFR 337

Query: 183 QRWNNLQF 206
           QRWNN+QF
Sbjct: 338 QRWNNMQF 345


>gb|ACF40836.1| endo-beta-1,4-glucanase, partial [Manilkara zapota]
          Length = 329

 Score =  127 bits (318), Expect = 1e-27
 Identities = 58/68 (85%), Positives = 61/68 (89%)
 Frame = +3

Query: 3   WDVKYAGVQTLVAKFLMGGKARGHAPVFGKYQEKAEFFMCSCLGKSSHNVRKTPGGLIFR 182
           WDVKYAGVQTLVAK LMGGKA  HAPVF  YQ+KAEFFMCSCLGK + NVRKTPGGLIFR
Sbjct: 204 WDVKYAGVQTLVAKILMGGKASHHAPVFQGYQQKAEFFMCSCLGKGTRNVRKTPGGLIFR 263

Query: 183 QRWNNLQF 206
           QRWNN+QF
Sbjct: 264 QRWNNMQF 271


>gb|AFZ78640.1| korrigan [Populus tomentosa]
          Length = 614

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/68 (83%), Positives = 62/68 (91%)
 Frame = +3

Query: 3   WDVKYAGVQTLVAKFLMGGKARGHAPVFGKYQEKAEFFMCSCLGKSSHNVRKTPGGLIFR 182
           WDVKYAGVQTLVA+FLM GKA  HAPVF KYQ+KAE+FMCSCLGK S NV+KTPGGLIFR
Sbjct: 278 WDVKYAGVQTLVARFLMQGKAGQHAPVFEKYQQKAEYFMCSCLGKGSRNVQKTPGGLIFR 337

Query: 183 QRWNNLQF 206
           QRWNN+QF
Sbjct: 338 QRWNNMQF 345


>gb|AFZ78641.1| korrigan [Populus tomentosa]
          Length = 622

 Score =  124 bits (312), Expect = 6e-27
 Identities = 56/68 (82%), Positives = 62/68 (91%)
 Frame = +3

Query: 3   WDVKYAGVQTLVAKFLMGGKARGHAPVFGKYQEKAEFFMCSCLGKSSHNVRKTPGGLIFR 182
           WDVKYAGVQTLVAKFLM GKA  HAPVF KYQ+KAE+FMCSCLGK + NV+KTPGGLI+R
Sbjct: 278 WDVKYAGVQTLVAKFLMQGKAGHHAPVFEKYQQKAEYFMCSCLGKGTRNVQKTPGGLIYR 337

Query: 183 QRWNNLQF 206
           QRWNN+QF
Sbjct: 338 QRWNNMQF 345


>ref|XP_002303645.1| glycosyl hydrolase family 9 [Populus trichocarpa]
           gi|222841077|gb|EEE78624.1| glycosyl hydrolase family 9
           [Populus trichocarpa] gi|347466589|gb|AEO97207.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
           gi|347466643|gb|AEO97234.1| endo-1,4-beta-glucanase
           [Populus trichocarpa]
          Length = 622

 Score =  124 bits (312), Expect = 6e-27
 Identities = 56/68 (82%), Positives = 62/68 (91%)
 Frame = +3

Query: 3   WDVKYAGVQTLVAKFLMGGKARGHAPVFGKYQEKAEFFMCSCLGKSSHNVRKTPGGLIFR 182
           WDVKYAGVQTLVAKFLM GKA  HAPVF KYQ+KAE+FMCSCLGK + NV+KTPGGLI+R
Sbjct: 278 WDVKYAGVQTLVAKFLMQGKAGHHAPVFEKYQQKAEYFMCSCLGKGTRNVQKTPGGLIYR 337

Query: 183 QRWNNLQF 206
           QRWNN+QF
Sbjct: 338 QRWNNMQF 345


Top