BLASTX nr result

ID: Atractylodes21_contig00012655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012655
         (742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   299   5e-79
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   298   6e-79
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   283   3e-74
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   280   3e-73
gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]    257   2e-66

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  299 bits (765), Expect = 5e-79
 Identities = 149/245 (60%), Positives = 182/245 (74%)
 Frame = +1

Query: 1   KKLKIHKDYVRFRAVCLAWRNATPRIPKHLPCQLPWLMLPRRTIQNPQSDLRSFVSLSDD 180
           KK KI+ DYVRFRAVC  WR + P+ P HLP QLPWLMLP+     P    R F SLS +
Sbjct: 17  KKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQ---SQPHHTHRPFFSLSLN 73

Query: 181 KVHLLSLPGDSDSYRRCGSSHGWLVILEETSLISILNPLTQAKHQLPPLSSFPNVIKYEP 360
           K H L LP  S   RR GSSHGWL+IL+E   I +LNPLT++K  LPPLS+FPNV+++  
Sbjct: 74  KFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLSTFPNVVRFNF 133

Query: 361 GDVGREYTLKTSDGDVYTCNSKEMRDSFIKKVIFSSSPSDEDVNYYALAILNQTGDLAYC 540
            DVGREY L+TS GDVYT + K+MRDSFIKK I SSSP++   ++ A+ ILNQTGDLA C
Sbjct: 134 ADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGS-DFIAVVILNQTGDLALC 192

Query: 541 KKGDQCWRFIDDANSFCEDVIFHKGCFYAVSKFSTIAVCDVSGSSPKVSFIETLRQIGGD 720
           +K D  W F++DA S+ EDVIFH+G FYAV+K+ +IAVCDVSGSSP+VS IE  +Q GGD
Sbjct: 193 RKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFGGD 252

Query: 721 MQYLV 735
           +QYLV
Sbjct: 253 LQYLV 257


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  298 bits (764), Expect = 6e-79
 Identities = 149/245 (60%), Positives = 182/245 (74%)
 Frame = +1

Query: 1   KKLKIHKDYVRFRAVCLAWRNATPRIPKHLPCQLPWLMLPRRTIQNPQSDLRSFVSLSDD 180
           KK KI+ DYVRFRAVC  WR + P+ P HLP QLPWLMLP+     P    R F SLS +
Sbjct: 17  KKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQ---SQPHHTHRPFFSLSLN 73

Query: 181 KVHLLSLPGDSDSYRRCGSSHGWLVILEETSLISILNPLTQAKHQLPPLSSFPNVIKYEP 360
           K H L LP  S   RR GSSHGWL+IL+E   I +LNPLT++K  LPPLS+FPNV+++  
Sbjct: 74  KFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLSTFPNVVRFNF 133

Query: 361 GDVGREYTLKTSDGDVYTCNSKEMRDSFIKKVIFSSSPSDEDVNYYALAILNQTGDLAYC 540
            DVGREY L+TS GDVYT + K+MRDSFIKK I SSSP++   ++ A+ ILNQTGDLA C
Sbjct: 134 ADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGS-DFIAVVILNQTGDLALC 192

Query: 541 KKGDQCWRFIDDANSFCEDVIFHKGCFYAVSKFSTIAVCDVSGSSPKVSFIETLRQIGGD 720
           +K D  W F++DA S+ EDVIFH+G FYAV+K+ +IAVCDVSGSSP+VS IE  +Q GGD
Sbjct: 193 RKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFGGD 252

Query: 721 MQYLV 735
           +QYLV
Sbjct: 253 LQYLV 257


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score =  283 bits (724), Expect = 3e-74
 Identities = 141/245 (57%), Positives = 178/245 (72%)
 Frame = +1

Query: 1   KKLKIHKDYVRFRAVCLAWRNATPRIPKHLPCQLPWLMLPRRTIQNPQSDLRSFVSLSDD 180
           K L I+ DY+  RAVC AWR + P+ P HLP QLPWLMLP+   Q+ QS  R+F SLS +
Sbjct: 18  KGLTIYSDYLYSRAVCHAWRFSIPKTPNHLPPQLPWLMLPQSQSQSNQSR-RAFFSLSTN 76

Query: 181 KVHLLSLPGDSDSYRRCGSSHGWLVILEETSLISILNPLTQAKHQLPPLSSFPNVIKYEP 360
           K H L+LP  S   R CGSSHGWL+IL++T  I ++NPLT+AK  LPPLSSFPNVI +  
Sbjct: 77  KFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLTRAKLSLPPLSSFPNVISFNY 136

Query: 361 GDVGREYTLKTSDGDVYTCNSKEMRDSFIKKVIFSSSPSDEDVNYYALAILNQTGDLAYC 540
            D+GREY L+   G+  T + ++MRDSFI+KV+ SSSP  +D N+  +AILNQT DLAYC
Sbjct: 137 SDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSPL-KDNNFVVIAILNQTDDLAYC 195

Query: 541 KKGDQCWRFIDDANSFCEDVIFHKGCFYAVSKFSTIAVCDVSGSSPKVSFIETLRQIGGD 720
           + GD+ W  +++A SFCEDVIF  G FYAV+K   I +CD+S  SP+VSF+ET RQ GGD
Sbjct: 196 RNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICDISSDSPRVSFMETPRQAGGD 255

Query: 721 MQYLV 735
           MQYLV
Sbjct: 256 MQYLV 260


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  280 bits (715), Expect = 3e-73
 Identities = 134/246 (54%), Positives = 181/246 (73%), Gaps = 1/246 (0%)
 Frame = +1

Query: 1   KKLKIHKDYVRFRAVCLAWRNATPRIPKHLPCQLPWLMLPRRTIQNPQSDLRSFVSLSDD 180
           KK+ I+ DY+ F+AVC AW+++ P+ P HLP QLPWL+LP+   Q+ QS  R+F +LS  
Sbjct: 18  KKITIYSDYLHFQAVCHAWKSSIPKTPNHLPPQLPWLLLPQS--QSNQSSYRAFFNLSTY 75

Query: 181 KVHLLSLPGDSDSYRRCGSSHGWLVILEETSLISILNPLTQAKHQLPPLSSFPNVIKYEP 360
           K H L+LP  S   + CGSSHGWL+IL+++  I ++NPLT+ K  LP +SSFPNV+ ++ 
Sbjct: 76  KFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLTRRKIHLPAISSFPNVVSFDY 135

Query: 361 GDVGREYTLKTSDGDVYTCNSKEMRDSFIKKVIFSSSPSDEDVNYY-ALAILNQTGDLAY 537
            +VGREY L    G+  T + ++MRD FIKKV+ SSSP ++  +++ A+AIL  TGDLAY
Sbjct: 136 ANVGREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSPLEKKGDFFVAMAILCSTGDLAY 195

Query: 538 CKKGDQCWRFIDDANSFCEDVIFHKGCFYAVSKFSTIAVCDVSGSSPKVSFIETLRQIGG 717
           CK GD+CW  ++++ SF EDVI+  G FYAV+K   I VCDV+G+SPKVSFIET RQIGG
Sbjct: 196 CKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNGNSPKVSFIETPRQIGG 255

Query: 718 DMQYLV 735
           DMQYLV
Sbjct: 256 DMQYLV 261


>gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]
          Length = 392

 Score =  257 bits (656), Expect = 2e-66
 Identities = 125/245 (51%), Positives = 173/245 (70%), Gaps = 1/245 (0%)
 Frame = +1

Query: 7   LKIHKDYVRFRAVCLAWRNATPRIPKHLPCQLPWLMLPRRTIQNPQSDLR-SFVSLSDDK 183
           L ++ DY+RFR VC +WR++ P+IP  LP QLP L++P         D R    + SD+K
Sbjct: 19  LTVYSDYLRFRVVCQSWRSSVPKIPHRLPPQLPCLIIPL------YHDCRCGLFNFSDNK 72

Query: 184 VHLLSLPGDSDSYRRCGSSHGWLVILEETSLISILNPLTQAKHQLPPLSSFPNVIKYEPG 363
           +H L LP  S   R CGSSHGWL IL+ET  I +LNPLT+AK +LPPLS+FPNV+ ++  
Sbjct: 73  IHFLYLPEASLRKRPCGSSHGWLTILDETPSILLLNPLTRAKFRLPPLSTFPNVVSFDYS 132

Query: 364 DVGREYTLKTSDGDVYTCNSKEMRDSFIKKVIFSSSPSDEDVNYYALAILNQTGDLAYCK 543
            VGREY ++T  G +YT N ++MRDSF+KK++ SSSPS+++ ++ A+AILN +GDLA+C+
Sbjct: 133 RVGREYLIRTPTGHIYTRNLRQMRDSFVKKIVLSSSPSNQN-DFLAVAILNHSGDLAFCR 191

Query: 544 KGDQCWRFIDDANSFCEDVIFHKGCFYAVSKFSTIAVCDVSGSSPKVSFIETLRQIGGDM 723
            G   W F+DDA S CEDVI+  G FYAV K+  +++ D+ GS  +VS + T RQ+ GD+
Sbjct: 192 SGGGSWTFVDDAPSDCEDVIYTDGVFYAVDKYGVVSLMDLRGSRSQVSLVATERQLAGDI 251

Query: 724 QYLVR 738
           QYLVR
Sbjct: 252 QYLVR 256


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