BLASTX nr result

ID: Atractylodes21_contig00012654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012654
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601931.1| GTP-binding protein [Medicago truncatula] gi...   109   5e-22
ref|NP_001149604.1| LOC100283230 [Zea mays] gi|195628412|gb|ACG3...   108   9e-22
dbj|BAJ93377.1| predicted protein [Hordeum vulgare subsp. vulgare]    108   1e-21
gb|AFK49375.1| unknown [Medicago truncatula]                          107   1e-21
ref|XP_002531672.1| protein with unknown function [Ricinus commu...   107   1e-21

>ref|XP_003601931.1| GTP-binding protein [Medicago truncatula]
           gi|355490979|gb|AES72182.1| GTP-binding protein
           [Medicago truncatula] gi|388518511|gb|AFK47317.1|
           unknown [Medicago truncatula]
          Length = 222

 Score =  109 bits (272), Expect = 5e-22
 Identities = 55/67 (82%), Positives = 59/67 (88%)
 Frame = -2

Query: 601 YVFKVVLIGDSAVGKS*ILARFSKNDFCLDSKTTVDVEF*TRTLVIEHKSVKTQIWGIAG 422
           YVFKVVLIGDSAVGKS ILARF++NDF +DSK T+ VEF TRTLVIEHKSVK QIW  AG
Sbjct: 15  YVFKVVLIGDSAVGKSQILARFARNDFSMDSKATIGVEFQTRTLVIEHKSVKAQIWDTAG 74

Query: 421 QERYRAV 401
           QERYRAV
Sbjct: 75  QERYRAV 81


>ref|NP_001149604.1| LOC100283230 [Zea mays] gi|195628412|gb|ACG36036.1| ras-related
           protein Rab11D [Zea mays] gi|224032313|gb|ACN35232.1|
           unknown [Zea mays] gi|413934318|gb|AFW68869.1| Ras
           protein Rab11D [Zea mays]
          Length = 217

 Score =  108 bits (270), Expect = 9e-22
 Identities = 55/67 (82%), Positives = 59/67 (88%)
 Frame = -2

Query: 601 YVFKVVLIGDSAVGKS*ILARFSKNDFCLDSKTTVDVEF*TRTLVIEHKSVKTQIWGIAG 422
           YVFKVVLIGDSAVGKS ILARF++N+F LDSK T+ VEF TRTLVIEHKSVK QIW  AG
Sbjct: 10  YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIEHKSVKAQIWDTAG 69

Query: 421 QERYRAV 401
           QERYRAV
Sbjct: 70  QERYRAV 76


>dbj|BAJ93377.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 216

 Score =  108 bits (269), Expect = 1e-21
 Identities = 55/72 (76%), Positives = 61/72 (84%)
 Frame = -2

Query: 616 IETEIYVFKVVLIGDSAVGKS*ILARFSKNDFCLDSKTTVDVEF*TRTLVIEHKSVKTQI 437
           +E   YVFKVVLIGDSAVGKS ILARF++N+F LDSK T+ VEF TRTLVI+HKSVK QI
Sbjct: 4   VEKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQI 63

Query: 436 WGIAGQERYRAV 401
           W  AGQERYRAV
Sbjct: 64  WDTAGQERYRAV 75


>gb|AFK49375.1| unknown [Medicago truncatula]
          Length = 225

 Score =  107 bits (268), Expect = 1e-21
 Identities = 54/67 (80%), Positives = 60/67 (89%)
 Frame = -2

Query: 601 YVFKVVLIGDSAVGKS*ILARFSKNDFCLDSKTTVDVEF*TRTLVIEHKSVKTQIWGIAG 422
           YVFKVVLIGDSAVGKS ILARFS+N+F LDSK+T+ VEF TRTLVI+HK+VK QIW  AG
Sbjct: 16  YVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAG 75

Query: 421 QERYRAV 401
           QERYRAV
Sbjct: 76  QERYRAV 82


>ref|XP_002531672.1| protein with unknown function [Ricinus communis]
           gi|223528703|gb|EEF30716.1| protein with unknown
           function [Ricinus communis]
          Length = 225

 Score =  107 bits (268), Expect = 1e-21
 Identities = 56/77 (72%), Positives = 63/77 (81%)
 Frame = -2

Query: 631 GFHLQIETEIYVFKVVLIGDSAVGKS*ILARFSKNDFCLDSKTTVDVEF*TRTLVIEHKS 452
           G+  Q +   YVFKVVLIGDSAVGKS ILARF++N+F LDSK T+ VEF TRTLVI+HKS
Sbjct: 6   GYGDQSQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65

Query: 451 VKTQIWGIAGQERYRAV 401
           VK QIW  AGQERYRAV
Sbjct: 66  VKAQIWDTAGQERYRAV 82


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