BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012626
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]               70   5e-15
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]      60   1e-13
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...    62   2e-13
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    57   7e-12
gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group...    56   8e-11

>gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]
          Length = 826

 Score = 70.1 bits (170), Expect(2) = 5e-15
 Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
 Frame = -2

Query: 359 SI*DLKTGSLLHRSGSVGDLYPVLPLSVRSTPANALVFVSPLTCHRRLGHSDTSVFNFLA 180
           S+ DL+T +++ R  S GDLYP  P    +T A AL+       HRRLGH      + L 
Sbjct: 555 SVKDLQTRNVIARCNSSGDLYPFFP---PATSATALLAAPASLWHRRLGHLGREALSQLV 611

Query: 179 SKRFISCSNKAST-LCHVCQLGKHCCFPFSTSVTK 78
           S   ISC+      LCH CQLG+H   PFSTS ++
Sbjct: 612 SSSAISCNKDDDYHLCHACQLGRHTRLPFSTSTSR 646



 Score = 38.1 bits (87), Expect(2) = 5e-15
 Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 3/31 (9%)
 Frame = -1

Query: 90  FCYKTSRL---FELVHSDLWTSPIVSLSGFK 7
           F   TSR    F+L+H DLW SPIVS+SG+K
Sbjct: 640 FSTSTSRATNNFDLIHCDLWASPIVSVSGYK 670


>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1480

 Score = 60.5 bits (145), Expect(2) = 1e-13
 Identities = 34/91 (37%), Positives = 46/91 (50%)
 Frame = -2

Query: 359 SI*DLKTGSLLHRSGSVGDLYPVLPLSVRSTPANALVFVSPLTCHRRLGHSDTSVFNFLA 180
           S+ DL T  ++ R  S GDLY  LP +V +  A++ +  S    H RLGH   +    L 
Sbjct: 448 SVKDLPTRRVILRCNSRGDLY-TLPTTVPAITAHSFLAKSSTLWHHRLGHPSPAAVQTLH 506

Query: 179 SKRFISCSNKASTLCHVCQLGKHCCFPFSTS 87
               +SC+   + LCH C LGKH    FS S
Sbjct: 507 KLAILSCTRSNNKLCHACHLGKHTRLSFSKS 537



 Score = 42.7 bits (99), Expect(2) = 1e-13
 Identities = 20/32 (62%), Positives = 23/32 (71%)
 Frame = -1

Query: 102 SFFYFCYKTSRLFELVHSDLWTSPIVSLSGFK 7
           SF      TS  FELVH D+WTSP++SLSGFK
Sbjct: 533 SFSKSSSSTSSPFELVHCDVWTSPVLSLSGFK 564


>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score = 62.0 bits (149), Expect(2) = 2e-13
 Identities = 33/91 (36%), Positives = 49/91 (53%)
 Frame = -2

Query: 359 SI*DLKTGSLLHRSGSVGDLYPVLPLSVRSTPANALVFVSPLTCHRRLGHSDTSVFNFLA 180
           S+  L+T  ++ R  S GDLY  LP++  +  A++ +  S    HRRLGH  ++    L 
Sbjct: 449 SVKGLRTRRVILRCNSRGDLY-TLPIAAPAIAAHSFLAQSSTLWHRRLGHPSSAAIQTLH 507

Query: 179 SKRFISCSNKASTLCHVCQLGKHCCFPFSTS 87
               + C+    +LCH C+LGKH   PFS S
Sbjct: 508 KLAILPCTKIDHSLCHACKLGKHTRLPFSRS 538



 Score = 40.4 bits (93), Expect(2) = 2e-13
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = -1

Query: 78  TSRLFELVHSDLWTSPIVSLSGFK 7
           TS  FELVH D+WTSP++S SGFK
Sbjct: 542 TSSPFELVHCDVWTSPVLSTSGFK 565


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 57.0 bits (136), Expect(2) = 7e-12
 Identities = 39/95 (41%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
 Frame = -2

Query: 359 SI*DLKTGSLLHRSGSVGDLYPVLPLSVRSTP-ANALVFVSPLTCHRRLGHSDTSVFNFL 183
           S+ DLKT + L R  S G LY V P S  S+  A A         HRRLGH  +++ + L
Sbjct: 453 SVKDLKTRNKLLRCDSSGPLYSVTPSSYPSSHHALAATTSDSFIWHRRLGHPSSTLLSHL 512

Query: 182 ASKRFISC-SNKASTLCHVCQLGKHCCFPFSTSVT 81
            S   IS      ++LC  CQLGKH   PF  S T
Sbjct: 513 LSSLSISVPKTDLTSLCQACQLGKHTRLPFFNSNT 547



 Score = 40.4 bits (93), Expect(2) = 7e-12
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = -1

Query: 75  SRLFELVHSDLWTSPIVSLSGFK 7
           S LFE+VHSD+WTSP+ S+SG K
Sbjct: 550 SSLFEIVHSDIWTSPVPSISGLK 572


>gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108709048|gb|ABF96843.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 594

 Score = 56.2 bits (134), Expect(2) = 8e-11
 Identities = 35/93 (37%), Positives = 47/93 (50%)
 Frame = -2

Query: 359 SI*DLKTGSLLHRSGSVGDLYPVLPLSVRSTPANALVFVSPLTCHRRLGHSDTSVFNFLA 180
           SI D +T  ++ R  S G+LY  LP +  S  A+  +  S    HRRLGH   +    L 
Sbjct: 441 SIKDPQTRRVILRCNSHGELY-TLPAAAPSIAAHYNLATSSTLWHRRLGHPGPTAVTTLQ 499

Query: 179 SKRFISCSNKASTLCHVCQLGKHCCFPFSTSVT 81
               I  S   ++LCH CQLGKH   PF+ S +
Sbjct: 500 HLSAIPRSKTNNSLCHACQLGKHTRLPFNKSTS 532



 Score = 37.7 bits (86), Expect(2) = 8e-11
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -1

Query: 78  TSRLFELVHSDLWTSPIVSLSGFK 7
           TS  FELVH D+WTS ++S+SGFK
Sbjct: 534 TSSPFELVHCDVWTSLVMSISGFK 557