BLASTX nr result

ID: Atractylodes21_contig00012559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012559
         (1564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281595.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   422   e-115
emb|CBI28122.3| unnamed protein product [Vitis vinifera]              410   e-112
ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g1...   406   e-111
ref|XP_002516614.1| ring finger protein, putative [Ricinus commu...   404   e-110
ref|XP_002309588.1| predicted protein [Populus trichocarpa] gi|2...   402   e-109

>ref|XP_002281595.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
            vinifera]
          Length = 427

 Score =  422 bits (1085), Expect = e-115
 Identities = 229/413 (55%), Positives = 274/413 (66%), Gaps = 14/413 (3%)
 Frame = -1

Query: 1459 MAVIPEEQNIDHAMDSFPLLVESRGNHEN-QHVIDL-----ERGXXXXXXXXXXXXSPPH 1298
            MAV  +E + +   D +PLL+E   N+EN +H++D+                    +P H
Sbjct: 1    MAVSSQEPSCESQTDRYPLLMERPENYENHEHIVDIVSASDASSSSSSDEDSAHVSNPTH 60

Query: 1297 GLSR---SPRVSTSQLVRASS----SGSNALXXXXXXXXXXRWSPFDTLLWILIELVFTL 1139
              +R      V  SQ   +SS    S ++++          RWSPF++ LWI IE+VFT 
Sbjct: 61   HENRPLTDAWVPISQSSPSSSDVSESRNSSIITRAHGPGRRRWSPFNSGLWISIEIVFTT 120

Query: 1138 GQIIASIVVLYISRHENPHTPLFAWIVGYAAGCVASLPFLYWRYLHRNQATEQGSTQVRQ 959
              I+ASIVVL +SR E P TPLFAW+VGYAAGC ASLP L+WRYL RN   EQG   + Q
Sbjct: 121  SLIVASIVVLSLSRDEKPQTPLFAWVVGYAAGCAASLPILFWRYLRRNHDGEQGLNHMLQ 180

Query: 958  TPSEGNHPPEPNSYITISFARSSEEETRPATSPDAWNGLNV-ASNARLTMLVDHFKMALD 782
              S+G+   E NSYITIS  RS+ EE  P  S + WNG  + ASNARL++L D++KMALD
Sbjct: 181  GSSQGSTTLESNSYITISLTRSAAEENLPDASTNTWNGHTMGASNARLSVLADYYKMALD 240

Query: 781  CFFAVWFVVGNVWIFGGHSSSADAPNLYRLCIVFLTFSCIGYAMPFILCGMXXXXXXXXX 602
            CFFAVWFVVGNVWIFGGHSS   APNLYRLCIVFLTFSCIGYAMPFILC M         
Sbjct: 241  CFFAVWFVVGNVWIFGGHSSFTAAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCLPCII 300

Query: 601  XXLGVREDMNQMRGASEDSINALPTHKFXXXXXXXXXXXXXDAGVDEGGILAAGTEKERA 422
              LG   D++Q+RGAS +SINALPT+KF              +GV EGG++ AGTEKERA
Sbjct: 301  SILG-HGDLSQVRGASAESINALPTYKFKLKKNGSGNSGEISSGV-EGGVVGAGTEKERA 358

Query: 421  ISGEDAVCCICLAKYADNDLLRELPCMHFFHIECVDKWLKINASCPLCKFEIG 263
            ISGEDAVCCICL +YAD+D LRELPC HFFH ECVDKWLKINASCPLCK E+G
Sbjct: 359  ISGEDAVCCICLTRYADDDELRELPCSHFFHSECVDKWLKINASCPLCKCEVG 411


>emb|CBI28122.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  410 bits (1054), Expect = e-112
 Identities = 205/311 (65%), Positives = 233/311 (74%), Gaps = 1/311 (0%)
 Frame = -1

Query: 1192 WSPFDTLLWILIELVFTLGQIIASIVVLYISRHENPHTPLFAWIVGYAAGCVASLPFLYW 1013
            WSPF++ LWI IE+VFT   I+ASIVVL +SR E P TPLFAW+VGYAAGC ASLP L+W
Sbjct: 83   WSPFNSGLWISIEIVFTTSLIVASIVVLSLSRDEKPQTPLFAWVVGYAAGCAASLPILFW 142

Query: 1012 RYLHRNQATEQGSTQVRQTPSEGNHPPEPNSYITISFARSSEEETRPATSPDAWNGLNV- 836
            RYL RN   EQG   + Q  S+G+   E NSYITIS  RS+ EE  P  S + WNG  + 
Sbjct: 143  RYLRRNHDGEQGLNHMLQGSSQGSTTLESNSYITISLTRSAAEENLPDASTNTWNGHTMG 202

Query: 835  ASNARLTMLVDHFKMALDCFFAVWFVVGNVWIFGGHSSSADAPNLYRLCIVFLTFSCIGY 656
            ASNARL++L D++KMALDCFFAVWFVVGNVWIFGGHSS   APNLYRLCIVFLTFSCIGY
Sbjct: 203  ASNARLSVLADYYKMALDCFFAVWFVVGNVWIFGGHSSFTAAPNLYRLCIVFLTFSCIGY 262

Query: 655  AMPFILCGMXXXXXXXXXXXLGVREDMNQMRGASEDSINALPTHKFXXXXXXXXXXXXXD 476
            AMPFILC M           LG   D++Q+RGAS +SINALPT+KF              
Sbjct: 263  AMPFILCAMICCCLPCIISILG-HGDLSQVRGASAESINALPTYKFKLKKNGSGNSGEIS 321

Query: 475  AGVDEGGILAAGTEKERAISGEDAVCCICLAKYADNDLLRELPCMHFFHIECVDKWLKIN 296
            +GV EGG++ AGTEKERAISGEDAVCCICL +YAD+D LRELPC HFFH ECVDKWLKIN
Sbjct: 322  SGV-EGGVVGAGTEKERAISGEDAVCCICLTRYADDDELRELPCSHFFHSECVDKWLKIN 380

Query: 295  ASCPLCKFEIG 263
            ASCPLCK E+G
Sbjct: 381  ASCPLCKCEVG 391


>ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
            vinifera]
          Length = 421

 Score =  406 bits (1044), Expect = e-111
 Identities = 223/411 (54%), Positives = 266/411 (64%), Gaps = 12/411 (2%)
 Frame = -1

Query: 1459 MAVIPEEQNIDHAMDSFPLLVESRGNH-ENQHVIDLERGXXXXXXXXXXXXSPPHGLSR- 1286
            MA+   E +     D +PLL+E  GN  + +H+ID+ R              P   L + 
Sbjct: 1    MAIPSLELHSKSQSDIYPLLMEQPGNQIDTEHIIDITRSGDASSSNSSNDG-PSTSLDQL 59

Query: 1285 --------SPRVSTSQLVRASSSGSNALXXXXXXXXXXRW-SPFDTLLWILIELVFTLGQ 1133
                    S RV  SQ   +SS+ SN+           R  SP ++ LWI IEL  T+ Q
Sbjct: 60   QHDDRPASSARVPISQPSFSSSNVSNSRNSFRRRADARRRRSPLNSGLWISIELALTVSQ 119

Query: 1132 IIASIVVLYISRHENPHTPLFAWIVGYAAGCVASLPFLYWRYLHRNQATEQGSTQVRQTP 953
            IIAS+VVL +SRHE+PH PLF WIVGYA+GCVA+LP LYWR+ HRNQ  EQ S Q RQ  
Sbjct: 120  IIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRNQGHEQESAQSRQVS 179

Query: 952  SEGNHPPEPNSYITISFARSSEEETRPATSPDAWNGLNVAS-NARLTMLVDHFKMALDCF 776
               N P  P    ++S   +SEEE R  + P   N  +V   +ARL +LV++FKMALDCF
Sbjct: 180  FHSNLPGGPT--FSLSVTGTSEEEDRQPSVPATRNSQSVRRLSARLKVLVEYFKMALDCF 237

Query: 775  FAVWFVVGNVWIFGGHSSSADAPNLYRLCIVFLTFSCIGYAMPFILCGMXXXXXXXXXXX 596
            FAVWFVVGNVWIFGGHSSS++APNLYRLCIVFLTFSCIGYAMPFILC             
Sbjct: 238  FAVWFVVGNVWIFGGHSSSSEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISI 297

Query: 595  LGVREDMNQMRGASEDSINALPTHKFXXXXXXXXXXXXXDAGVDEGGILAAGTEKERAIS 416
            LG RED+ Q RGA+ +SINALPT+KF             ++G  EGG++AAGTE+ER IS
Sbjct: 298  LGFREDLTQTRGATSESINALPTYKFKLKKNRNGDDREGNSGAGEGGVVAAGTERERVIS 357

Query: 415  GEDAVCCICLAKYADNDLLRELPCMHFFHIECVDKWLKINASCPLCKFEIG 263
            GEDAVCCICLAKYA+ND LRELPC HFFH ECVDKWLKINA CPLCK E+G
Sbjct: 358  GEDAVCCICLAKYANNDELRELPCSHFFHKECVDKWLKINALCPLCKREVG 408


>ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
            gi|223544434|gb|EEF45955.1| ring finger protein, putative
            [Ricinus communis]
          Length = 437

 Score =  404 bits (1037), Expect = e-110
 Identities = 222/413 (53%), Positives = 269/413 (65%), Gaps = 14/413 (3%)
 Frame = -1

Query: 1459 MAVIPEEQNIDHAMDSFPLLVE-SRGNHENQHVIDLERGXXXXXXXXXXXXSP------- 1304
            M V   EQ+ +   D+ PLL+E S   + ++H+ID+ R             +        
Sbjct: 1    MDVSSTEQHSESLTDTCPLLMEQSNSINSSEHIIDIPRSSDSSPSTSHDRTTSGLEASSN 60

Query: 1303 ---PHGLSRSPRVSTSQLVRASSSGSNALXXXXXXXXXXRW--SPFDTLLWILIELVFTL 1139
               P    R+P  S S L   +S+GSN            R   SP ++ LWI +ELV T+
Sbjct: 61   EDRPTTSVRTP--SISHLSTGTSNGSNTRNSSLIRRGEARRRRSPLNSGLWISVELVLTV 118

Query: 1138 GQIIASIVVLYISRHENPHTPLFAWIVGYAAGCVASLPFLYWRYLHRNQATEQGSTQVRQ 959
             QIIASIVVL +SRHE+P  PLFAWIVGYA+GCVA+LP LYWRY HRNQ TEQ + Q RQ
Sbjct: 119  SQIIASIVVLSLSRHEHPRAPLFAWIVGYASGCVATLPLLYWRYRHRNQVTEQEAAQPRQ 178

Query: 958  TPSEGNHPPEPNSYITISFARSSEEETRPATSPDAWNGLNV-ASNARLTMLVDHFKMALD 782
            +    +H   P   I+IS  R+SE   R ++S  +  G N  A NARL  LV++FKMALD
Sbjct: 179  S----SHFSVPGDSISISITRNSEVVDRRSSSTSSRGGQNSGALNARLKTLVEYFKMALD 234

Query: 781  CFFAVWFVVGNVWIFGGHSSSADAPNLYRLCIVFLTFSCIGYAMPFILCGMXXXXXXXXX 602
            CFFAVWFVVGNVWIFGGHSS+ +APN+YRLCIVFLTFSCIGYAMPFILC           
Sbjct: 235  CFFAVWFVVGNVWIFGGHSSATEAPNMYRLCIVFLTFSCIGYAMPFILCATICCCLPCII 294

Query: 601  XXLGVREDMNQMRGASEDSINALPTHKFXXXXXXXXXXXXXDAGVDEGGILAAGTEKERA 422
              LG RED+ Q RGA+ +SI+ALPT+KF             ++G  +GG++AAGTE ER 
Sbjct: 295  SLLGFREDLGQTRGATSESIDALPTYKFKLNKHRTGDDRDSNSGAGDGGVVAAGTEHERF 354

Query: 421  ISGEDAVCCICLAKYADNDLLRELPCMHFFHIECVDKWLKINASCPLCKFEIG 263
            ISGEDAVCCICLAKYA+ND LRELPC HFFH +CVDKWLKINASCPLCK E+G
Sbjct: 355  ISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKTEVG 407


>ref|XP_002309588.1| predicted protein [Populus trichocarpa] gi|222855564|gb|EEE93111.1|
            predicted protein [Populus trichocarpa]
          Length = 406

 Score =  402 bits (1032), Expect = e-109
 Identities = 217/411 (52%), Positives = 265/411 (64%), Gaps = 12/411 (2%)
 Frame = -1

Query: 1459 MAVIPEEQNIDHAMDSFPLLVESRGN-HENQHVIDLERGXXXXXXXXXXXXS-------- 1307
            M V   E + +   D+FPLL+E   N + + H+ID+ R             S        
Sbjct: 1    MDVPSTELHSESQTDTFPLLMERPENLNSSAHIIDIPRNIEVPGSPSHDRISSGLEASSH 60

Query: 1306 ---PPHGLSRSPRVSTSQLVRASSSGSNALXXXXXXXXXXRWSPFDTLLWILIELVFTLG 1136
               P  G+       ++ L   ++S S++L            SP ++ LWI +ELV TL 
Sbjct: 61   EDRPSSGVRAPSTQPSTSLSNGTNSRSSSLIRRGEARRRR--SPLNSGLWISVELVLTLS 118

Query: 1135 QIIASIVVLYISRHENPHTPLFAWIVGYAAGCVASLPFLYWRYLHRNQATEQGSTQVRQT 956
            QI+ASIVVL +SRHE+PH PLFAWIVGYA+GCVA+LP LYWRY +RNQ+ EQ S Q  Q 
Sbjct: 119  QIVASIVVLSVSRHEHPHAPLFAWIVGYASGCVATLPLLYWRYRYRNQSLEQDSAQNHQG 178

Query: 955  PSEGNHPPEPNSYITISFARSSEEETRPATSPDAWNGLNVASNARLTMLVDHFKMALDCF 776
             +  N P  P S   +S +R+SE + R + +       N   NARL +LV++FKMALDCF
Sbjct: 179  SAHINVPAGPFS---LSVSRNSESDDRRSATTSPRGSQNAVLNARLKVLVEYFKMALDCF 235

Query: 775  FAVWFVVGNVWIFGGHSSSADAPNLYRLCIVFLTFSCIGYAMPFILCGMXXXXXXXXXXX 596
            FAVWFVVGNVWIFGGHSS+ +APNLYRLCIVFLTFSCIGYAMPFILC             
Sbjct: 236  FAVWFVVGNVWIFGGHSSAEEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISV 295

Query: 595  LGVREDMNQMRGASEDSINALPTHKFXXXXXXXXXXXXXDAGVDEGGILAAGTEKERAIS 416
            LG RED+ Q RGA+ +SI+ALPT+KF              AG  +GG++AAGTEKER IS
Sbjct: 296  LGYREDLTQTRGATTESIDALPTYKF--KLIKNRNGEDSSAGASDGGVVAAGTEKERVIS 353

Query: 415  GEDAVCCICLAKYADNDLLRELPCMHFFHIECVDKWLKINASCPLCKFEIG 263
            GEDAVCCICLAK+A+ND LRELPC HFFH ECVDKWLKINASCPLCK E+G
Sbjct: 354  GEDAVCCICLAKFANNDELRELPCSHFFHKECVDKWLKINASCPLCKSEVG 404


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