BLASTX nr result

ID: Atractylodes21_contig00010400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010400
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   143   1e-32
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   138   4e-31
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]   119   2e-25
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...   119   3e-25
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   115   4e-24

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  143 bits (361), Expect = 1e-32
 Identities = 65/114 (57%), Positives = 87/114 (76%)
 Frame = -3

Query: 342 HNFLSLSTIEKLRITITPTAEFGVCLGTGKAVQGRGECQGILLHLQGVDIHENFLPLTLG 163
           HNF+SL T+ +L+I I+ +  FGV LGTG    G+GEC+ + LHLQGV + E++LPLTLG
Sbjct: 441 HNFISLDTVRRLQIPISSSRPFGVSLGTGAEAHGQGECKAVPLHLQGVCVMEDYLPLTLG 500

Query: 162 NSDVILGVQWLEKLGPVTTNWKTQLMTFKINGQPVTLKGDPSLERARISLKTMW 1
           NSD+ILGVQWLEKLG + TNWKTQ + +K   + VTL+G+P+L R  +SLK M+
Sbjct: 501 NSDLILGVQWLEKLGTMVTNWKTQTLQYKEGNETVTLRGNPALSRTEVSLKAMY 554


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  138 bits (348), Expect = 4e-31
 Identities = 68/114 (59%), Positives = 87/114 (76%), Gaps = 1/114 (0%)
 Frame = -3

Query: 342 HNFLSLSTIEKLRITITPTAEFGVCLGTGKAVQGRGECQGILLHLQG-VDIHENFLPLTL 166
           HNFLSL  I+KL I +T + EFGV LG G+AV+G G C+ + L+L G + + E+FLPL L
Sbjct: 504 HNFLSLKAIDKLGIPVTESEEFGVSLGDGQAVRGTGICRAVALYLDGGLVVVEDFLPLGL 563

Query: 165 GNSDVILGVQWLEKLGPVTTNWKTQLMTFKINGQPVTLKGDPSLERARISLKTM 4
           GNSDVILGVQWLE LG V +NWKTQ M+F++ G P TL GDP+L R+++SLK M
Sbjct: 564 GNSDVILGVQWLETLGTVVSNWKTQKMSFQLGGVPYTLTGDPTLARSKVSLKAM 617


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score =  119 bits (299), Expect = 2e-25
 Identities = 55/113 (48%), Positives = 77/113 (68%)
 Frame = -3

Query: 342 HNFLSLSTIEKLRITITPTAEFGVCLGTGKAVQGRGECQGILLHLQGVDIHENFLPLTLG 163
           HNFLSL  +++L + +T T  + V +GTG +V+G+G C+G+ + +QG+ + E+FLPL LG
Sbjct: 22  HNFLSLELVQQLALPLTTTTSYEVMMGTGISVKGKGICRGVCISMQGLTVVEDFLPLELG 81

Query: 162 NSDVILGVQWLEKLGPVTTNWKTQLMTFKINGQPVTLKGDPSLERARISLKTM 4
           N+DVILG+ WL  LG V  NWK   M  K+    + LKGDPSL R  +SLK M
Sbjct: 82  NTDVILGMPWLGTLGDVKVNWKMLTMKIKMGKAVIVLKGDPSLSRIEVSLKAM 134


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/113 (47%), Positives = 80/113 (70%)
 Frame = -3

Query: 342 HNFLSLSTIEKLRITITPTAEFGVCLGTGKAVQGRGECQGILLHLQGVDIHENFLPLTLG 163
           HNF+SL  +E+++I  T T ++GV +G+GKAVQG+G C G+++ L G+ + E+FLPL LG
Sbjct: 391 HNFISLRLVEEMQIATTETTQYGVIMGSGKAVQGKGMCTGVVVGLPGLTVVEDFLPLELG 450

Query: 162 NSDVILGVQWLEKLGPVTTNWKTQLMTFKINGQPVTLKGDPSLERARISLKTM 4
           + D++LG+QWL K G +T +W+   MTF +    V L+GD SL R  ISLK +
Sbjct: 451 HLDMVLGMQWLPKQGAMTVDWRNLAMTFAVRDVKVMLRGDLSLTRMAISLKML 503


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  115 bits (288), Expect = 4e-24
 Identities = 53/109 (48%), Positives = 74/109 (67%)
 Frame = -3

Query: 342  HNFLSLSTIEKLRITITPTAEFGVCLGTGKAVQGRGECQGILLHLQGVDIHENFLPLTLG 163
            HNFLSL  +++L + +T T  +GV +GTG +V+G+G C+G+ + +QG+ + E+FLPL LG
Sbjct: 1080 HNFLSLELVQQLTLPLTTTTSYGVMMGTGISVKGKGICRGVCISMQGLTVVEDFLPLELG 1139

Query: 162  NSDVILGVQWLEKLGPVTTNWKTQLMTFKINGQPVTLKGDPSLERARIS 16
            N+DVILG+ WL  LG V  NWK   M  K+    + LKGDPSL R   S
Sbjct: 1140 NTDVILGMPWLGTLGDVKVNWKMLTMKIKMGKAVMVLKGDPSLSRTETS 1188


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