BLASTX nr result

ID: Atractylodes21_contig00010312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010312
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001044960.1| Os01g0874900 [Oryza sativa Japonica Group] g...    80   4e-13
gb|ABO61384.1| serine hydroxymethyltransferase [Populus tremuloi...    79   5e-13
gb|AFW84430.1| hypothetical protein ZEAMMB73_274964 [Zea mays]         78   6e-13
ref|XP_002456723.1| hypothetical protein SORBIDRAFT_03g041410 [S...    79   9e-13
gb|ACN26253.1| unknown [Zea mays] gi|414879458|tpg|DAA56589.1| T...    79   9e-13

>ref|NP_001044960.1| Os01g0874900 [Oryza sativa Japonica Group]
           gi|19386847|dbj|BAB86225.1| putative
           hydroxymethyltransferase [Oryza sativa Japonica Group]
           gi|20804756|dbj|BAB92441.1| putative serine
           hydroxymethyltransferase [Oryza sativa Japonica Group]
           gi|113534491|dbj|BAF06874.1| Os01g0874900 [Oryza sativa
           Japonica Group] gi|125528561|gb|EAY76675.1| hypothetical
           protein OsI_04630 [Oryza sativa Indica Group]
           gi|125572826|gb|EAZ14341.1| hypothetical protein
           OsJ_04263 [Oryza sativa Japonica Group]
           gi|215737211|dbj|BAG96140.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 600

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 39/69 (56%), Positives = 49/69 (71%)
 Frame = +1

Query: 175 RKVPGATNFVHGVSYKVKPHMGIMDFRNLEERALGFHPKILICGWSSYRKGSE*SK*RSI 354
           +KV GA+ F   +SYKV P  G +D+  LEERA+ FHPKILICG SSY +  + ++ R I
Sbjct: 277 KKVSGASIFFESLSYKVNPQTGYIDYDKLEERAMDFHPKILICGGSSYPREWDFARMRLI 336

Query: 355 ADKCGVVLM 381
           ADKCG VLM
Sbjct: 337 ADKCGAVLM 345


>gb|ABO61384.1| serine hydroxymethyltransferase [Populus tremuloides]
          Length = 578

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 47/109 (43%), Positives = 59/109 (54%)
 Frame = +1

Query: 175 RKVPGATNFVHGVSYKVKPHMGIMDFRNLEERALGFHPKILICGWSSYRKGSE*SK*RSI 354
           RKV GA+ F   + YKV P  G +DF  LEERAL F PKILICG SSY +    ++ R I
Sbjct: 254 RKVSGASIFFESLPYKVNPQTGYIDFDKLEERALDFRPKILICGGSSYPREWGYARLRHI 313

Query: 355 ADKCGVVLM*TWLQSAASLLQS*VVFLANLMLDFIICDFLRPVTDLCLK 501
           ADKCG VLM    Q +       +V     +  F+ CD +   T   L+
Sbjct: 314 ADKCGAVLMCDMAQISG------LVAAKECLNPFVYCDIVTSTTHKSLR 356


>gb|AFW84430.1| hypothetical protein ZEAMMB73_274964 [Zea mays]
          Length = 361

 Score = 78.2 bits (191), Expect(2) = 6e-13
 Identities = 37/69 (53%), Positives = 49/69 (71%)
 Frame = +1

Query: 175 RKVPGATNFVHGVSYKVKPHMGIMDFRNLEERALGFHPKILICGWSSYRKGSE*SK*RSI 354
           +KV GA+ F   +SYKV P  G +D+  LEERA+ FHPKILICG SSY +  + ++ R +
Sbjct: 262 KKVSGASIFFESMSYKVNPQTGYIDYDKLEERAMDFHPKILICGGSSYPREWDFARMRLV 321

Query: 355 ADKCGVVLM 381
           ADKCG VL+
Sbjct: 322 ADKCGAVLL 330



 Score = 21.2 bits (43), Expect(2) = 6e-13
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +3

Query: 384 NMAPISGLVAAEL 422
           +MA ISGLVAA+L
Sbjct: 332 DMAHISGLVAAKL 344


>ref|XP_002456723.1| hypothetical protein SORBIDRAFT_03g041410 [Sorghum bicolor]
           gi|241928698|gb|EES01843.1| hypothetical protein
           SORBIDRAFT_03g041410 [Sorghum bicolor]
          Length = 593

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 38/69 (55%), Positives = 49/69 (71%)
 Frame = +1

Query: 175 RKVPGATNFVHGVSYKVKPHMGIMDFRNLEERALGFHPKILICGWSSYRKGSE*SK*RSI 354
           +KV GA+ F   +SYKV P  G +D+  LEERA+ FHPKILICG SSY +  + ++ R I
Sbjct: 270 KKVSGASIFFESMSYKVNPQTGYIDYDKLEERAMDFHPKILICGGSSYPREWDFARMRLI 329

Query: 355 ADKCGVVLM 381
           ADKCG VL+
Sbjct: 330 ADKCGAVLL 338


>gb|ACN26253.1| unknown [Zea mays] gi|414879458|tpg|DAA56589.1| TPA: hypothetical
           protein ZEAMMB73_385949 [Zea mays]
          Length = 446

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 38/69 (55%), Positives = 49/69 (71%)
 Frame = +1

Query: 175 RKVPGATNFVHGVSYKVKPHMGIMDFRNLEERALGFHPKILICGWSSYRKGSE*SK*RSI 354
           +KV GA+ F   +SYKV P  G +D+  LEERA+ FHPKILICG SSY +  + ++ R I
Sbjct: 123 KKVSGASIFFESMSYKVNPQTGYIDYDKLEERAMDFHPKILICGGSSYPREWDFARMRLI 182

Query: 355 ADKCGVVLM 381
           ADKCG VL+
Sbjct: 183 ADKCGAVLL 191


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