BLASTX nr result

ID: Atractylodes21_contig00010039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010039
         (1185 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin...   444   e-122
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu...   436   e-120
ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2...   410   e-112
emb|CBI28414.3| unnamed protein product [Vitis vinifera]              399   e-109
ref|XP_002302838.1| predicted protein [Populus trichocarpa] gi|2...   384   e-104

>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like [Vitis
            vinifera]
          Length = 572

 Score =  444 bits (1142), Expect = e-122
 Identities = 238/375 (63%), Positives = 278/375 (74%), Gaps = 16/375 (4%)
 Frame = -1

Query: 1092 MDFSESTKVVYDRIQKIEPENVSKIIGYLLLQDHGEREMIRLAFGPDKLIHSLINKAKTH 913
            MDFSESTKVVY+RIQK+EPENVSKIIGYLLLQDHGER+MIR AF  D  I  LINKAK  
Sbjct: 1    MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 60

Query: 912  LKLLSNTASCRPLSPPQVNSIP--EMPIHFTPFSPSACRSPSTIQVPTRCCDPH----GQ 751
            L L S  A   P+SPPQVN  P  ++P+ FTPFSP++ R   + +      DP      Q
Sbjct: 61   LGLSSKPAVSSPISPPQVNPSPVSDLPLQFTPFSPASARPFPSPRPGNSYWDPQVNGDQQ 120

Query: 750  PV----DYVPVVYPASFPEDYRLHNQLRFLSLEDQIEPVNSPEFSTNNYYSSEPALGPRA 583
             V    D+VP  Y  S P+D+RL +Q+ FL++EDQ+E     EFS  +YY +E AL  R 
Sbjct: 121  QVHKLGDFVPQGYSDSLPDDFRLQSQIHFLAMEDQLENSVGSEFS-GSYYYAEQALNTRI 179

Query: 582  NRRSPSLPEFPFKVCHYFIKGFCRHGNNCRYL--HPTAESFSQIFSPGLSE---DDHVFS 418
            +RRSPSLPEFP KVCHYF KGFC+HGN+CRY   HP  ESFSQIFSPG +E   DDHVF 
Sbjct: 180  SRRSPSLPEFPLKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPGANELPNDDHVFP 239

Query: 417  PGSXXXXXXXXXXXXKSRRGFPVSIASLPMLYYEKFGKTLQAEGYLTESQRHGKAGYSLT 238
            PGS            KSRRG PVSIASLPM+YYEK+G+TLQAEGYLTESQRHGKAGYSLT
Sbjct: 240  PGSLEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLT 299

Query: 237  KLLARLK-SICLIDRPHGQHAVVLADDLAKCLDHNGDRNEHGGIVAGSRQIYLTFPAEST 61
            KLLARLK SI LIDRPHGQH+V+LA+DL K ++ NG+R++ G IV  S+QIYLTFPA+ST
Sbjct: 300  KLLARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPGAIVGSSKQIYLTFPADST 359

Query: 60   FSERDVFNYFNKFGP 16
            F+E+DV NYFNKFGP
Sbjct: 360  FTEQDVSNYFNKFGP 374


>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
            gi|223525472|gb|EEF28048.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 578

 Score =  436 bits (1122), Expect = e-120
 Identities = 235/380 (61%), Positives = 279/380 (73%), Gaps = 21/380 (5%)
 Frame = -1

Query: 1092 MDFSESTKVVYDRIQKIEPENVSKIIGYLLLQDHGEREMIRLAFGPDKLIHSLINKAKTH 913
            MDF+ESTKVVY+RIQK+EPENVSKIIGYLLLQDH EREMIRLAF PD LI+SLI KAK+ 
Sbjct: 1    MDFTESTKVVYNRIQKLEPENVSKIIGYLLLQDHSEREMIRLAFSPDNLIYSLITKAKSD 60

Query: 912  LKLLSNTASCRPLSPPQVNSIP--EMPIHFTPFSPSACRSPSTIQVPTRCCDPHGQP--- 748
            L L +  A   P+SP QVN+ P  ++P+ FTPFSP++    S+     R    +      
Sbjct: 61   LGL-NKPALSAPISPSQVNTSPVSDIPLQFTPFSPASAHPISSPAASRRTASAYWDAQVT 119

Query: 747  --------VDYVPVVYPASFPEDYRLHNQLRFLSLEDQIEPVNS--PEFSTNNYYSSEPA 598
                    +D+    Y  + PEDYRL N ++FL+L+DQ E  +S   +FS+N +YS EPA
Sbjct: 120  GDQQQVPNLDFGSPGYSDTVPEDYRLQNHMQFLTLDDQFEFAHSVNSDFSSNYFYS-EPA 178

Query: 597  LGPRANRRSPSLPEFPFKVCHYFIKGFCRHGNNCRYLH--PTAESFSQIFSP---GLSED 433
            LGPR NRRSPSLPEFP K+CHYF KG+C+HGNNCRY+H  P  E FSQIFS      S D
Sbjct: 179  LGPRTNRRSPSLPEFPLKICHYFSKGYCKHGNNCRYVHGHPMPEGFSQIFSTKSNDFSND 238

Query: 432  DHVFSPGSXXXXXXXXXXXXKSRRGFPVSIASLPMLYYEKFGKTLQAEGYLTESQRHGKA 253
            +HV SPGS            KSRRG PVSIASLPM+YYEK+GKTLQAEGYLTESQRHGKA
Sbjct: 239  EHVVSPGSLEKLEMELAELLKSRRGMPVSIASLPMMYYEKYGKTLQAEGYLTESQRHGKA 298

Query: 252  GYSLTKLLARLK-SICLIDRPHGQHAVVLADDLAKCLDHNGDRNEHGGIVAGSRQIYLTF 76
            GYSLTKLLARLK SI +IDRPHGQH+V+L +D+ K L++ G+RN+ GGIVAGSRQIYLTF
Sbjct: 299  GYSLTKLLARLKNSIRVIDRPHGQHSVILEEDVPKYLEYVGERNDPGGIVAGSRQIYLTF 358

Query: 75   PAESTFSERDVFNYFNKFGP 16
            PAES F+E DV  YF+KFGP
Sbjct: 359  PAESIFTEHDVSIYFSKFGP 378


>ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1|
            predicted protein [Populus trichocarpa]
          Length = 554

 Score =  410 bits (1055), Expect = e-112
 Identities = 226/369 (61%), Positives = 269/369 (72%), Gaps = 10/369 (2%)
 Frame = -1

Query: 1092 MDFSESTKVVYDRIQKIEPENVSKIIGYLLLQDHGEREMIRLAFGPDKLIHSLINKAKTH 913
            MDFSESTKVVY+RIQ+IEPE V KIIGY+LLQ+HGEREMIRLAF PD LI++ I+KAK+ 
Sbjct: 1    MDFSESTKVVYNRIQEIEPEFVGKIIGYILLQNHGEREMIRLAFSPDNLIYATISKAKSD 60

Query: 912  LKLLSNTASCRPLSPPQVNSIPEMPIHFTPFSPSACRSPSTIQVPTRCCDPHGQPVDYVP 733
            L L + T    P+SP QVN  P   +H   F P+   S   I  P             + 
Sbjct: 61   LGL-NKTPVPNPISPSQVNPAPVSDVHLQ-FIPNTAVSSHPISSP-------------IK 105

Query: 732  VVYPASFPE----DYRLHNQLRFLSLEDQIEPVNSPEFSTNNYYSSEPALGPRANRRSPS 565
            +    SF +    DYRL NQ++FL+ +DQ+E VNS +FS++ +Y  EPALGPR +RRSPS
Sbjct: 106  IRTAGSFWDAQVTDYRLQNQMQFLTSDDQLEFVNS-DFSSSYFYP-EPALGPRTSRRSPS 163

Query: 564  LPEFPFKVCHYFIKGFCRHGNNCRYLH--PTAESFSQIFSPGLSE---DDHVFSPGSXXX 400
            LPEFP K+CHYF KGFC+HGNNCRY H  P  ESFSQI S   +E   D+H  SPGS   
Sbjct: 164  LPEFPVKICHYFNKGFCKHGNNCRYFHGHPMPESFSQILSLNSNEIANDEHFISPGSLEK 223

Query: 399  XXXXXXXXXKSRRGFPVSIASLPMLYYEKFGKTLQAEGYLTESQRHGKAGYSLTKLLARL 220
                     KSRRG PVSIASLPM+YYEK+G+ LQAEGYLTESQRHGKAGYSLTKLLARL
Sbjct: 224  LELELTELLKSRRGVPVSIASLPMMYYEKYGRMLQAEGYLTESQRHGKAGYSLTKLLARL 283

Query: 219  K-SICLIDRPHGQHAVVLADDLAKCLDHNGDRNEHGGIVAGSRQIYLTFPAESTFSERDV 43
            K SI LIDRPHGQH+V+L +D+ K L++ G+RN+ GGIVAGSRQIYLTFPAESTF+E+DV
Sbjct: 284  KNSIRLIDRPHGQHSVILTEDVPKYLEYAGERNDPGGIVAGSRQIYLTFPAESTFTEQDV 343

Query: 42   FNYFNKFGP 16
             NYF+KFGP
Sbjct: 344  SNYFSKFGP 352


>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
          Length = 525

 Score =  399 bits (1025), Expect = e-109
 Identities = 219/370 (59%), Positives = 249/370 (67%), Gaps = 6/370 (1%)
 Frame = -1

Query: 1107 WC*PKMDFSESTKVVYDRIQKIEPENVSKIIGYLLLQDHGEREMIRLAFGPDKLIHSLIN 928
            W    MDFSESTKVVY+RIQK+EPENVSKIIGYLLLQDHGER+MIR AF  D  I  LIN
Sbjct: 9    WVDTDMDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLIN 68

Query: 927  KAKTHLKLLSNTASCRPLSPPQVNSIPEMPIHFTPFSPSACRSPSTIQVPTRCCDPHGQP 748
            KAK  L L S  A   P+SPPQVN  P M                               
Sbjct: 69   KAKAELGLSSKPAVSSPISPPQVNPSPSM------------------------------- 97

Query: 747  VDYVPVVYPASFPEDYRLHNQLRFLSLEDQIEPVNSPEFSTNNYYSSEPALGPRANRRSP 568
                               +Q+ FL++EDQ+E     EFS  +YY +E AL  R +RRSP
Sbjct: 98   -------------------SQIHFLAMEDQLENSVGSEFS-GSYYYAEQALNTRISRRSP 137

Query: 567  SLPEFPFKVCHYFIKGFCRHGNNCRYLH--PTAESFSQIFSPGLSE---DDHVFSPGSXX 403
            SLPEFP KVCHYF KGFC+HGN+CRY H  P  ESFSQIFSPG +E   DDHVF PGS  
Sbjct: 138  SLPEFPLKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPGANELPNDDHVFPPGSLE 197

Query: 402  XXXXXXXXXXKSRRGFPVSIASLPMLYYEKFGKTLQAEGYLTESQRHGKAGYSLTKLLAR 223
                      KSRRG PVSIASLPM+YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLLAR
Sbjct: 198  KLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLAR 257

Query: 222  LK-SICLIDRPHGQHAVVLADDLAKCLDHNGDRNEHGGIVAGSRQIYLTFPAESTFSERD 46
            LK SI LIDRPHGQH+V+LA+DL K ++ NG+R++ G IV  S+QIYLTFPA+STF+E+D
Sbjct: 258  LKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPGAIVGSSKQIYLTFPADSTFTEQD 317

Query: 45   VFNYFNKFGP 16
            V NYFNKFGP
Sbjct: 318  VSNYFNKFGP 327


>ref|XP_002302838.1| predicted protein [Populus trichocarpa] gi|222844564|gb|EEE82111.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  384 bits (986), Expect = e-104
 Identities = 214/362 (59%), Positives = 257/362 (70%), Gaps = 3/362 (0%)
 Frame = -1

Query: 1092 MDFSESTKVVYDRIQKIEPENVSKIIGYLLLQDHGEREMIRLAFGPDKLIHSLINKAKTH 913
            MDFSESTKVVY+RIQ IEPE V KIIGY+L+Q+HGEREMIRLAF PD LI+++I KAK+ 
Sbjct: 1    MDFSESTKVVYNRIQAIEPEFVGKIIGYILIQNHGEREMIRLAFSPDNLIYAMICKAKSD 60

Query: 912  LKLLSNTASCRPLSPPQVNSIP--EMPIHFTPFSPSACRSPSTIQVPTRCCDPHGQPVDY 739
            L L +       +SP QVN  P  ++P  F P S             T    P   PV  
Sbjct: 61   LGL-NKIPVLNLISPSQVNPSPVSDVPQQFIPNS-------------TVSSHPIFSPVKV 106

Query: 738  VPVVYPASFPEDYRLHNQLRFLSLEDQIEPVNSPEFSTNNYYSSEPALGPRANRRSPSLP 559
                Y    PEDYR+ NQ++FL+L+D IE VNS +FS++  Y  EPAL PR +RRSPSLP
Sbjct: 107  RTAGYSEMVPEDYRIQNQMQFLALDDPIEFVNS-DFSSSYIYP-EPALSPRTSRRSPSLP 164

Query: 558  EFPFKVCHYFIKGFCRHGNNCRYLHPTAESFSQIFSPGLSEDDHVFSPGSXXXXXXXXXX 379
            EFP K+CHYFIKGFC+HGNNC      + + ++I     + ++ V SPGS          
Sbjct: 165  EFPVKICHYFIKGFCKHGNNC------SSNLNEI-----ANEEFVVSPGSFEKLELELTE 213

Query: 378  XXKSRRGFPVSIASLPMLYYEKFGKTLQAEGYLTESQRHGKAGYSLTKLLARLK-SICLI 202
              KSRRG PVSIASLPM+YYE +G+TLQAEGYLTESQRHGKAGYSLTKLLARLK SI LI
Sbjct: 214  LLKSRRGVPVSIASLPMMYYEMYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLI 273

Query: 201  DRPHGQHAVVLADDLAKCLDHNGDRNEHGGIVAGSRQIYLTFPAESTFSERDVFNYFNKF 22
            DRPHGQH+V+LA+D  K L++ G+RN+ GGIVAGSRQIYLTFPAESTF+E+DV NYF+ F
Sbjct: 274  DRPHGQHSVILAEDFPKYLEYAGERNDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSNF 333

Query: 21   GP 16
            GP
Sbjct: 334  GP 335


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