BLASTX nr result

ID: Atractylodes21_contig00009491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009491
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265045.1| PREDICTED: 30S ribosomal protein S10, chloro...   243   3e-62
emb|CAN74383.1| hypothetical protein VITISV_023801 [Vitis vinifera]   243   6e-62
sp|Q9M4Y3.1|RR10_MESCR RecName: Full=30S ribosomal protein S10, ...   242   7e-62
ref|NP_001236492.1| uncharacterized protein LOC100306286 [Glycin...   242   1e-61
emb|CBI39707.3| unnamed protein product [Vitis vinifera]              241   1e-61

>ref|XP_002265045.1| PREDICTED: 30S ribosomal protein S10, chloroplastic [Vitis
           vinifera]
          Length = 203

 Score =  243 bits (621), Expect = 3e-62
 Identities = 136/202 (67%), Positives = 156/202 (77%), Gaps = 16/202 (7%)
 Frame = +3

Query: 120 TMAFSSSLAATVFPLCNS--SSIYSTPKLSALPFLPNVSSTSRVQFQSPRLSTTRVFAAP 293
           TMA +SS AA + P+  +  SSI    + S+L  L N S +S ++   P LS++RVFAAP
Sbjct: 3   TMAITSSSAARLPPMLPTYNSSISHKLRPSSLSLLSNASFSS-LKTLKPSLSSSRVFAAP 61

Query: 294 EALEQ-----------TLEVED---PESSTVISGSDSEKLAPKQKIRIKLRSYWVPLIED 431
           E L             T+EVE    P +S +  G D++K+APKQKIRIKLRSYWVPLIED
Sbjct: 62  ELLSSQETPDGLEDSATIEVEGSETPGASALSMGVDADKMAPKQKIRIKLRSYWVPLIED 121

Query: 432 SCKQIMDAARTTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPT 611
           SCKQIM+AARTTNAKTMGPVPLPTKK+I+CVLKSPHVHKDARFHFEIRTHQRLIDILYPT
Sbjct: 122 SCKQIMEAARTTNAKTMGPVPLPTKKKIFCVLKSPHVHKDARFHFEIRTHQRLIDILYPT 181

Query: 612 AQTIDSLMQLDLPAGVDVEVKL 677
           AQTIDSLMQLDLPAGVDVEVKL
Sbjct: 182 AQTIDSLMQLDLPAGVDVEVKL 203


>emb|CAN74383.1| hypothetical protein VITISV_023801 [Vitis vinifera]
          Length = 203

 Score =  243 bits (619), Expect = 6e-62
 Identities = 136/202 (67%), Positives = 156/202 (77%), Gaps = 16/202 (7%)
 Frame = +3

Query: 120 TMAFSSSLAATVFPLCNS--SSIYSTPKLSALPFLPNVSSTSRVQFQSPRLSTTRVFAAP 293
           TMA +SS AA + P+  +  SSI    + S+L  L N SS+S ++   P LS++RVFAA 
Sbjct: 3   TMAITSSSAARLPPMLPTYNSSISHKLRPSSLSLLSNASSSS-LKTLKPSLSSSRVFAAS 61

Query: 294 EALEQ-----------TLEVED---PESSTVISGSDSEKLAPKQKIRIKLRSYWVPLIED 431
           E L             T+EVE    P +S +  G D++K+APKQKIRIKLRSYWVPLIED
Sbjct: 62  ELLSSQETPDGLEDSATIEVEGSETPGASALSMGVDADKMAPKQKIRIKLRSYWVPLIED 121

Query: 432 SCKQIMDAARTTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPT 611
           SCKQIM+AARTTNAKTMGPVPLPTKK+I+CVLKSPHVHKDARFHFEIRTHQRLIDILYPT
Sbjct: 122 SCKQIMEAARTTNAKTMGPVPLPTKKKIFCVLKSPHVHKDARFHFEIRTHQRLIDILYPT 181

Query: 612 AQTIDSLMQLDLPAGVDVEVKL 677
           AQTIDSLMQLDLPAGVDVEVKL
Sbjct: 182 AQTIDSLMQLDLPAGVDVEVKL 203


>sp|Q9M4Y3.1|RR10_MESCR RecName: Full=30S ribosomal protein S10, chloroplastic; Flags:
           Precursor gi|188036211|pdb|3BBN|J Chain J, Homology
           Model For The Spinach Chloroplast 30s Subunit Fitted To
           9.4a Cryo-Em Map Of The 70s Chlororibosome.
           gi|7578929|gb|AAF64190.1|AF245665_1 plastid ribosomal
           protein S10 precursor [Mesembryanthemum crystallinum]
          Length = 197

 Score =  242 bits (618), Expect = 7e-62
 Identities = 134/195 (68%), Positives = 154/195 (78%), Gaps = 13/195 (6%)
 Frame = +3

Query: 132 SSSLAATVFP---LCNSSSIYSTPKLSALPFLPNVSSTSR-VQFQSPRLSTT---RVFAA 290
           +SSL+  VF    L NSSS  + P++S L    ++S+  R +   SP  S++   RVFAA
Sbjct: 3   TSSLSTIVFSPLALSNSSSFPNKPQVSNLSLHSSLSNLRRTLSHSSPSSSSSSNVRVFAA 62

Query: 291 PEALE------QTLEVEDPESSTVISGSDSEKLAPKQKIRIKLRSYWVPLIEDSCKQIMD 452
           PE LE      ++   E  E+S +  G+DS+++APKQKIRIKLRSYWVPLIEDSCKQIMD
Sbjct: 63  PEVLESQETGPESYVEEGSETSALGIGADSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMD 122

Query: 453 AARTTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSL 632
           AARTTNAKTMGPVPLPTKKRI+CVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSL
Sbjct: 123 AARTTNAKTMGPVPLPTKKRIFCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSL 182

Query: 633 MQLDLPAGVDVEVKL 677
           MQLDLPAGVDVEVKL
Sbjct: 183 MQLDLPAGVDVEVKL 197


>ref|NP_001236492.1| uncharacterized protein LOC100306286 [Glycine max]
           gi|255628105|gb|ACU14397.1| unknown [Glycine max]
          Length = 207

 Score =  242 bits (617), Expect = 1e-61
 Identities = 135/204 (66%), Positives = 148/204 (72%), Gaps = 23/204 (11%)
 Frame = +3

Query: 135 SSLAATVFPLCNSS-SIYSTPKLSALPFLPNVSSTSRVQFQSPRLSTTRVFAAPEALEQ- 308
           SSL+ T   L NSS S+ S PK  +L FL   ++T RV    P  S+T V  A EAL+  
Sbjct: 4   SSLSVTPLSLSNSSPSLSSKPKFPSLCFLSGNNTTLRVTCPKPLHSSTVVHVATEALDSS 63

Query: 309 ------------------TLEVED---PESSTVISGSDSEKLAPKQKIRIKLRSYWVPLI 425
                             T EV D   P +S +  G D++ +APKQKIRIKLRSYWVPLI
Sbjct: 64  PDPLDPPPETLDDDSDATTFEVGDLGTPSTSAISIGGDADTMAPKQKIRIKLRSYWVPLI 123

Query: 426 EDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILY 605
           EDSCKQI+DAARTTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILY
Sbjct: 124 EDSCKQILDAARTTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILY 183

Query: 606 PTAQTIDSLMQLDLPAGVDVEVKL 677
           PTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 184 PTAQTIDSLMQLDLPAGVDVEVKL 207


>emb|CBI39707.3| unnamed protein product [Vitis vinifera]
          Length = 200

 Score =  241 bits (616), Expect = 1e-61
 Identities = 135/201 (67%), Positives = 155/201 (77%), Gaps = 16/201 (7%)
 Frame = +3

Query: 123 MAFSSSLAATVFPLCNS--SSIYSTPKLSALPFLPNVSSTSRVQFQSPRLSTTRVFAAPE 296
           MA +SS AA + P+  +  SSI    + S+L  L N S +S ++   P LS++RVFAAPE
Sbjct: 1   MAITSSSAARLPPMLPTYNSSISHKLRPSSLSLLSNASFSS-LKTLKPSLSSSRVFAAPE 59

Query: 297 ALEQ-----------TLEVED---PESSTVISGSDSEKLAPKQKIRIKLRSYWVPLIEDS 434
            L             T+EVE    P +S +  G D++K+APKQKIRIKLRSYWVPLIEDS
Sbjct: 60  LLSSQETPDGLEDSATIEVEGSETPGASALSMGVDADKMAPKQKIRIKLRSYWVPLIEDS 119

Query: 435 CKQIMDAARTTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTA 614
           CKQIM+AARTTNAKTMGPVPLPTKK+I+CVLKSPHVHKDARFHFEIRTHQRLIDILYPTA
Sbjct: 120 CKQIMEAARTTNAKTMGPVPLPTKKKIFCVLKSPHVHKDARFHFEIRTHQRLIDILYPTA 179

Query: 615 QTIDSLMQLDLPAGVDVEVKL 677
           QTIDSLMQLDLPAGVDVEVKL
Sbjct: 180 QTIDSLMQLDLPAGVDVEVKL 200


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