BLASTX nr result

ID: Atractylodes21_contig00009348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009348
         (1380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326427.1| predicted protein [Populus trichocarpa] gi|2...   336   1e-89
ref|XP_002323102.1| predicted protein [Populus trichocarpa] gi|2...   331   3e-88
ref|XP_003623658.1| RING finger protein [Medicago truncatula] gi...   330   7e-88
ref|XP_002275951.1| PREDICTED: RING finger and transmembrane dom...   326   8e-87
emb|CAN78074.1| hypothetical protein VITISV_038020 [Vitis vinifera]   326   8e-87

>ref|XP_002326427.1| predicted protein [Populus trichocarpa] gi|222833620|gb|EEE72097.1|
            predicted protein [Populus trichocarpa]
          Length = 443

 Score =  336 bits (861), Expect = 1e-89
 Identities = 170/289 (58%), Positives = 203/289 (70%), Gaps = 2/289 (0%)
 Frame = +3

Query: 519  LQAPVTTIFEYSGFLRPRSSS--DYXXXXXXXXXXXXXXXXDSGIAPSNNDGEVSIRIIG 692
            LQAP++ + EYSG LR   SS  +                  S  A  +N+GEV+IRIIG
Sbjct: 42   LQAPISLLLEYSGLLRTTRSSHQETESLIPGGGGLGSTRLDGSSAAVVSNNGEVAIRIIG 101

Query: 693  DGEQEGEHGTDGGESAVIGGDGGDREREMAXXXXXXXXXXXXXINDNSDSSNQQRYDLQQ 872
             GE E +  + GG   V+G  GG +    +                N   S  QRYD+QQ
Sbjct: 102  SGEHEHDRDSSGG--LVVGQVGGGQNESSSVGGDGEAADGA---GGNGRDSTYQRYDIQQ 156

Query: 873  VSRWIEQILPFSLLLIVVFIRQHLQGFFVTIYVTAFMYKSNDILRKQTALKGERKLSVLA 1052
             +RWIEQ+LPFSLLL+VVFIRQHLQGFFVTI++   M+KSNDILRKQTALKGERK+S+L 
Sbjct: 157  AARWIEQVLPFSLLLLVVFIRQHLQGFFVTIWIAVVMFKSNDILRKQTALKGERKVSMLV 216

Query: 1053 GYSVIFMLHVIGVYWWYQNDDLSYPLFMVPPKAIPPFWHAIFIIIVNDTMVRQAAMTLKL 1232
            G S+ F +HV+GVYWWYQNDDL YPL M+PPK+IPPFWHAIFII+VNDT+VRQAAM  K 
Sbjct: 217  GISLAFAIHVVGVYWWYQNDDLLYPLIMLPPKSIPPFWHAIFIIMVNDTLVRQAAMVFKC 276

Query: 1233 VLLMYYKNGRGHNFRRQGQMLTLVEYALLLYRAFLPAPVWYRFFLNKEY 1379
            +LL+ YKN RG N+R+QGQMLTLVEY +LLYRA LP PVWYRFFLNKEY
Sbjct: 277  ILLISYKNSRGRNYRKQGQMLTLVEYLMLLYRALLPTPVWYRFFLNKEY 325


>ref|XP_002323102.1| predicted protein [Populus trichocarpa] gi|222867732|gb|EEF04863.1|
            predicted protein [Populus trichocarpa]
          Length = 444

 Score =  331 bits (848), Expect = 3e-88
 Identities = 177/319 (55%), Positives = 206/319 (64%), Gaps = 32/319 (10%)
 Frame = +3

Query: 519  LQAPVTTIFEYSGFLRPRSSSDYXXXXXXXXXXXXXXXXDSGIAPSN-----NDGEVSIR 683
            +QAP++++ EYSG LR   S+                   S +  S+     N+GEVSIR
Sbjct: 8    IQAPISSLLEYSGLLRTTRSNHQENESLIPGGLGGGGHGSSRLDDSSASVVPNNGEVSIR 67

Query: 684  IIGDGEQE--GEHG-----TDGGESAVIG--------------------GDGGDREREMA 782
            IIG GE E  G  G       G ++ V+G                    GD  D      
Sbjct: 68   IIGAGEHERDGSGGLVVGQVGGAQNEVLGQQQMMGADALQGDLRSDRGGGDAADGAGGQQ 127

Query: 783  XXXXXXXXXXXXXINDNSDSSNQQRYDLQQVSRWIEQILPFSLLLIVVFIRQHLQGFFVT 962
                            N   S  QRYD+QQV+RWIEQ+LPFSLLL+VVFIRQHLQGFFVT
Sbjct: 128  SSSVSGDGEAADEAGGNGRDSTYQRYDIQQVARWIEQVLPFSLLLLVVFIRQHLQGFFVT 187

Query: 963  IYVTAFMYKSNDILRKQTALKGERKLSVLAGYSVIFMLHVIGVYWWYQNDDLSYPLFMVP 1142
            I +   M+KSNDILRKQTALKGERK+SVL G S+ FM+HV+ VYWWYQNDDL YPL M+P
Sbjct: 188  IGIAVVMFKSNDILRKQTALKGERKISVLVGISLAFMVHVVAVYWWYQNDDLLYPLIMLP 247

Query: 1143 PKAIPPFWHAIFIIIVNDTMVRQAAMTLKLVLLMYYKNGRGHNFRRQGQMLTLVEYALLL 1322
            PK+IPPFWHAIFII+VNDT+VRQAAM  K VLL+YYKN RG N+RRQGQMLTLVEY +LL
Sbjct: 248  PKSIPPFWHAIFIIMVNDTLVRQAAMAFKCVLLIYYKNSRGRNYRRQGQMLTLVEYLILL 307

Query: 1323 YRAFLPAPVWYRFFLNKEY 1379
            YRA LPAPVWYRFFLNKEY
Sbjct: 308  YRALLPAPVWYRFFLNKEY 326


>ref|XP_003623658.1| RING finger protein [Medicago truncatula] gi|355498673|gb|AES79876.1|
            RING finger protein [Medicago truncatula]
          Length = 426

 Score =  330 bits (845), Expect = 7e-88
 Identities = 175/302 (57%), Positives = 202/302 (66%), Gaps = 15/302 (4%)
 Frame = +3

Query: 519  LQAPVTTIFEYSGFLRPRSSSDYXXXXXXXXXXXXXXXXDSGIAPSNNDGEVSIRIIGDG 698
            +QAP++ + EYSG L  RS+  +                DS  AP  NDGEVSIRIIG  
Sbjct: 23   IQAPLSALLEYSGILPARSNQQHQPIP------------DS--AP--NDGEVSIRIIGSN 66

Query: 699  EQEGEHGTDGGESAVIGGDG----------GDREREMAXXXXXXXXXXXXX-----INDN 833
            EQ+      G    V  G G          GD E  +                   +  N
Sbjct: 67   EQDNHRDEQGSPLVVNDGGGAAAMTNSSEHGDVEGVLRTGSGNVDAESGGGGGGGDVGAN 126

Query: 834  SDSSNQQRYDLQQVSRWIEQILPFSLLLIVVFIRQHLQGFFVTIYVTAFMYKSNDILRKQ 1013
               S+ QRYD+Q  +RWIEQ+LPFSLLL+VVFIRQHLQGFFVTI++ A ++KSNDILRKQ
Sbjct: 127  GRDSSYQRYDIQHAARWIEQVLPFSLLLLVVFIRQHLQGFFVTIWIAAVLFKSNDILRKQ 186

Query: 1014 TALKGERKLSVLAGYSVIFMLHVIGVYWWYQNDDLSYPLFMVPPKAIPPFWHAIFIIIVN 1193
            TALKGERK+ VL G SV F LHV+ VYWWYQNDDL YPL M+PPK IPPFWHAIFII+VN
Sbjct: 187  TALKGERKMPVLIGISVAFTLHVVSVYWWYQNDDLMYPLVMLPPKEIPPFWHAIFIIMVN 246

Query: 1194 DTMVRQAAMTLKLVLLMYYKNGRGHNFRRQGQMLTLVEYALLLYRAFLPAPVWYRFFLNK 1373
            DT+ RQAAM +K +LLMYYKN RG N+R+QGQMLTLVEY LLLYRA LPAPVWYRFFLNK
Sbjct: 247  DTLARQAAMVVKCILLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPAPVWYRFFLNK 306

Query: 1374 EY 1379
            EY
Sbjct: 307  EY 308


>ref|XP_002275951.1| PREDICTED: RING finger and transmembrane domain-containing protein
            2-like [Vitis vinifera]
          Length = 447

 Score =  326 bits (836), Expect = 8e-87
 Identities = 177/322 (54%), Positives = 204/322 (63%), Gaps = 34/322 (10%)
 Frame = +3

Query: 516  FLQAPVTTIFEYSGFLRPRSSSDYXXXXXXXXXXXXXXXXDS----------GIAPSNND 665
            F+QAP+  + EYSG    RSSS                   S             P++  
Sbjct: 19   FIQAPLAALLEYSGIFSTRSSSSQETDGLIAPSPASLDSFHSRSDDRDRDHDPSTPASTP 78

Query: 666  GEVSIRIIGDGEQEGE------------------------HGTDGGESAVIGGDGGDRER 773
             EVSIRIIG GEQE E                            G   A +   G   + 
Sbjct: 79   EEVSIRIIGAGEQEREAVSLDNDRSSSEQISEAPAVSDASRNESGSGVAAVNSGGSTADG 138

Query: 774  EMAXXXXXXXXXXXXXINDNSDSSNQQRYDLQQVSRWIEQILPFSLLLIVVFIRQHLQGF 953
            E A              + N+  S+ QRYD+QQ +RWIEQILPFSLLL+VVFIRQHLQGF
Sbjct: 139  EPANGG-----------SVNNRDSSYQRYDIQQFARWIEQILPFSLLLLVVFIRQHLQGF 187

Query: 954  FVTIYVTAFMYKSNDILRKQTALKGERKLSVLAGYSVIFMLHVIGVYWWYQNDDLSYPLF 1133
            FVTI++ A M+KSNDILRKQTALKGERKLSVL G + +FMLHVI VYWWY+N+DL YPL 
Sbjct: 188  FVTIWIAAVMFKSNDILRKQTALKGERKLSVLTGITAVFMLHVICVYWWYRNNDLLYPLV 247

Query: 1134 MVPPKAIPPFWHAIFIIIVNDTMVRQAAMTLKLVLLMYYKNGRGHNFRRQGQMLTLVEYA 1313
            ++PPKAIPPFWHAIFII+VNDTMVRQAAM LK +LLMYYKN RG ++R+QGQMLTLVEY 
Sbjct: 248  LLPPKAIPPFWHAIFIIMVNDTMVRQAAMALKCILLMYYKNSRGRDYRKQGQMLTLVEYL 307

Query: 1314 LLLYRAFLPAPVWYRFFLNKEY 1379
            LLLYRA LP PVWYRFFLNKEY
Sbjct: 308  LLLYRALLPTPVWYRFFLNKEY 329


>emb|CAN78074.1| hypothetical protein VITISV_038020 [Vitis vinifera]
          Length = 640

 Score =  326 bits (836), Expect = 8e-87
 Identities = 177/322 (54%), Positives = 204/322 (63%), Gaps = 34/322 (10%)
 Frame = +3

Query: 516  FLQAPVTTIFEYSGFLRPRSSSDYXXXXXXXXXXXXXXXXDS----------GIAPSNND 665
            F+QAP+  + EYSG    RSSS                   S             P++  
Sbjct: 19   FIQAPLAALLEYSGIFSTRSSSSQETDGLIAPSPASLDSFHSRSDDRDRDHDPSTPASTP 78

Query: 666  GEVSIRIIGDGEQEGE------------------------HGTDGGESAVIGGDGGDRER 773
             EVSIRIIG GEQE E                            G   A +   G   + 
Sbjct: 79   EEVSIRIIGAGEQEREAVSLDNDRSSSEQISEAPAVSDXSRNESGSGVAAVNSGGSTADG 138

Query: 774  EMAXXXXXXXXXXXXXINDNSDSSNQQRYDLQQVSRWIEQILPFSLLLIVVFIRQHLQGF 953
            E A              + N+  S+ QRYD+QQ +RWIEQILPFSLLL+VVFIRQHLQGF
Sbjct: 139  EPANGG-----------SVNNRDSSYQRYDIQQFARWIEQILPFSLLLLVVFIRQHLQGF 187

Query: 954  FVTIYVTAFMYKSNDILRKQTALKGERKLSVLAGYSVIFMLHVIGVYWWYQNDDLSYPLF 1133
            FVTI++ A M+KSNDILRKQTALKGERKLSVL G + +FMLHVI VYWWY+N+DL YPL 
Sbjct: 188  FVTIWIAAVMFKSNDILRKQTALKGERKLSVLTGITAVFMLHVICVYWWYRNNDLLYPLV 247

Query: 1134 MVPPKAIPPFWHAIFIIIVNDTMVRQAAMTLKLVLLMYYKNGRGHNFRRQGQMLTLVEYA 1313
            ++PPKAIPPFWHAIFII+VNDTMVRQAAM LK +LLMYYKN RG ++R+QGQMLTLVEY 
Sbjct: 248  LLPPKAIPPFWHAIFIIMVNDTMVRQAAMALKCILLMYYKNSRGRDYRKQGQMLTLVEYL 307

Query: 1314 LLLYRAFLPAPVWYRFFLNKEY 1379
            LLLYRA LP PVWYRFFLNKEY
Sbjct: 308  LLLYRALLPTPVWYRFFLNKEY 329


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