BLASTX nr result

ID: Atractylodes21_contig00009334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009334
         (1045 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273461.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   201   2e-49
ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|2...   192   1e-46
gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]      192   1e-46
ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|1...   189   1e-45
gb|ABK95155.1| unknown [Populus trichocarpa]                          187   3e-45

>ref|XP_002273461.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 233

 Score =  201 bits (511), Expect = 2e-49
 Identities = 117/220 (53%), Positives = 141/220 (64%), Gaps = 27/220 (12%)
 Frame = +2

Query: 203 MASDAEAS----VSSLIEGL---------MAMPFLSGVISTSPES---DPDHEFTDRPHP 334
           MAS++EAS     +S +E L         M +PF+ G   T+      DPD E TD P P
Sbjct: 1   MASESEASGASSSASFLERLISSRNRDLSMFIPFILGFTDTTTRQESDDPDDETTDTPTP 60

Query: 335 GSSLDRIILINPLTQGMVVIRGSATGFDSLLNDLMKKDGQPPASQASIDAMPTLEIKGTE 514
               DRIILINP TQGM+VI G+++ FDSLL +L  K GQPPA++ASI+AMP++E+ G +
Sbjct: 61  R---DRIILINPFTQGMIVIEGNSS-FDSLLRELASKGGQPPATKASIEAMPSVEVGGDD 116

Query: 515 EIENFEGECVICLKEWEVGDVAKEMPCKHKFHGECVEKWLKIHGSCPVCRHKMPVDDSD- 691
                 GECVICL+EW+VG VAKEMPCKHKFH  C+ KWL IHGSCPVCRHKMPVD+ D 
Sbjct: 117 ------GECVICLEEWKVGCVAKEMPCKHKFHENCIVKWLGIHGSCPVCRHKMPVDEEDL 170

Query: 692 -KK----FADESGR-----RREIWVTLSFGSGSEEERPNQ 781
            KK      DE GR      REIWV+ SF S S     NQ
Sbjct: 171 GKKREGSVGDEEGRGRRRVEREIWVSFSFNSNSRRNDSNQ 210


>ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|222851125|gb|EEE88672.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  192 bits (488), Expect = 1e-46
 Identities = 108/212 (50%), Positives = 138/212 (65%), Gaps = 19/212 (8%)
 Frame = +2

Query: 203 MASDAE--ASVSSLIEGLMA-------MPFLSGVISTSP--ESDPDHEFTDRPHPGSSLD 349
           MAS+ E  A +SS+ E L+        +PF+ G  ST+   E DPD E    P      +
Sbjct: 1   MASETELPAELSSMFERLLRHRDLSLFLPFIFGFTSTNSTEERDPDQE----PQTTDPNE 56

Query: 350 RIILINPLTQGMVVIRGSATGFDSLLNDLMKKDGQPPASQASIDAMPTLEIKGTEEIENF 529
           RIILINPLTQGMVVI G+A+  +SLL D+  K+GQPPAS+ASI+AMP++EI      +N 
Sbjct: 57  RIILINPLTQGMVVIEGAAS-LESLLRDIGNKNGQPPASKASIEAMPSVEIGE----DNK 111

Query: 530 EGECVICLKEWEVGDVAKEMPCKHKFHGECVEKWLKIHGSCPVCRHKMPVDDSD---KKF 700
           +GEC ICL+EWE G V KEMPCKH+FHG CVEKWLKIHG+CPVCR+KMPVD+ +   K+ 
Sbjct: 112 DGECAICLEEWEPGAVVKEMPCKHRFHGNCVEKWLKIHGNCPVCRYKMPVDEEELGKKRD 171

Query: 701 ADESGR-----RREIWVTLSFGSGSEEERPNQ 781
             + GR      REIWV+ +F         N+
Sbjct: 172 GGDGGREWRRAEREIWVSFAFNGNRRNRDSNE 203


>gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 225

 Score =  192 bits (488), Expect = 1e-46
 Identities = 108/212 (50%), Positives = 138/212 (65%), Gaps = 19/212 (8%)
 Frame = +2

Query: 203 MASDAE--ASVSSLIEGLMA-------MPFLSGVISTSP--ESDPDHEFTDRPHPGSSLD 349
           MAS+ E  A +SS+ E L+        +PF+ G  ST+   E DPD E    P      +
Sbjct: 1   MASETELPAELSSMFERLLRHRDLSLFLPFIFGFTSTNSTEERDPDQE----PQTTDPNE 56

Query: 350 RIILINPLTQGMVVIRGSATGFDSLLNDLMKKDGQPPASQASIDAMPTLEIKGTEEIENF 529
           RIILINPLTQGMVVI G+A+  +SLL D+  K+GQPPAS+ASI+AMP++EI      +N 
Sbjct: 57  RIILINPLTQGMVVIEGAAS-LESLLRDMGNKNGQPPASKASIEAMPSVEIGE----DNK 111

Query: 530 EGECVICLKEWEVGDVAKEMPCKHKFHGECVEKWLKIHGSCPVCRHKMPVDDSD---KKF 700
           +GEC ICL+EWE G V KEMPCKH+FHG CVEKWLKIHG+CPVCR+KMPVD+ +   K+ 
Sbjct: 112 DGECAICLEEWEPGAVVKEMPCKHRFHGNCVEKWLKIHGNCPVCRYKMPVDEEELGKKRD 171

Query: 701 ADESGR-----RREIWVTLSFGSGSEEERPNQ 781
             + GR      REIWV+ +F         N+
Sbjct: 172 GGDGGREWRRAEREIWVSFAFNGNRRNRDSNE 203


>ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|118483434|gb|ABK93617.1|
           unknown [Populus trichocarpa]
           gi|222865173|gb|EEF02304.1| predicted protein [Populus
           trichocarpa]
          Length = 218

 Score =  189 bits (480), Expect = 1e-45
 Identities = 108/214 (50%), Positives = 138/214 (64%), Gaps = 22/214 (10%)
 Frame = +2

Query: 203 MASDAE--ASVSSLIEGLMA-------MPFLSGVISTSP--ESDPDHEFTDRPHPGSSLD 349
           MAS+ E  A  SS+ E L+        +PF+ G  ST+   + DPD E      P    +
Sbjct: 1   MASETEFPAEFSSMFERLLRHRDLSLFLPFILGFTSTNTTEQRDPDQEAPQTTDPN---E 57

Query: 350 RIILINPLTQGMVVIRGSATGFDSLLNDLMKKDGQPPASQASIDAMPTLEIKGTEEIENF 529
           RIILINP TQGMVVI G+A+  +SLL D+  K GQPPAS+ASI+AMP +EI      +N 
Sbjct: 58  RIILINPFTQGMVVIEGAAS-LESLLRDIGNKKGQPPASKASIEAMPKVEIGE----DNK 112

Query: 530 EGECVICLKEWEVGDVAKEMPCKHKFHGECVEKWLKIHGSCPVCRHKMPVDDSD---KKF 700
           +GEC ICL+EWE+G V KEMPCKH+FHG CVEKWLKIHG+CPVCR+KMPVD+ +   K+ 
Sbjct: 113 DGECAICLEEWELGGVVKEMPCKHRFHGGCVEKWLKIHGNCPVCRYKMPVDEEELGKKRD 172

Query: 701 ADESGR----RREIWVTLSFG----SGSEEERPN 778
             + GR     REIWV+ +F     +G   E P+
Sbjct: 173 EGDGGRERRVEREIWVSFAFNGSRRNGDSNENPS 206


>gb|ABK95155.1| unknown [Populus trichocarpa]
          Length = 212

 Score =  187 bits (476), Expect = 3e-45
 Identities = 99/185 (53%), Positives = 125/185 (67%), Gaps = 10/185 (5%)
 Frame = +2

Query: 257 MPFLSGVISTSP--ESDPDHEFTDRPHPGSSLDRIILINPLTQGMVVIRGSATGFDSLLN 430
           +PF+ G  ST+   E DPD E    P      +RIILINPLTQGMVVI G+A+  +SLL 
Sbjct: 15  LPFIFGFTSTNSTEERDPDQE----PQTTDPNERIILINPLTQGMVVIEGAAS-LESLLR 69

Query: 431 DLMKKDGQPPASQASIDAMPTLEIKGTEEIENFEGECVICLKEWEVGDVAKEMPCKHKFH 610
           D+  K+GQPPAS+ASI+AMP++EI      +N +GEC ICL+EWE G V KEMPCKH+FH
Sbjct: 70  DIGNKNGQPPASKASIEAMPSVEIGE----DNKDGECAICLEEWEPGAVVKEMPCKHRFH 125

Query: 611 GECVEKWLKIHGSCPVCRHKMPVDDSD---KKFADESGR-----RREIWVTLSFGSGSEE 766
           G CVEKWLKIHG+CPVCR+KMPVD+ +   K+   + GR      REIWV+ +F      
Sbjct: 126 GNCVEKWLKIHGNCPVCRYKMPVDEEELGKKRDGGDGGREWRRAEREIWVSFAFNGNRRN 185

Query: 767 ERPNQ 781
              N+
Sbjct: 186 RDSNE 190


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