BLASTX nr result

ID: Atractylodes21_contig00009239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009239
         (3748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]               116   4e-23
emb|CAN80083.1| hypothetical protein VITISV_011293 [Vitis vinifera]    68   5e-22
ref|XP_004170551.1| PREDICTED: LOW QUALITY PROTEIN: protein ROS1...    91   2e-15
ref|XP_004164145.1| PREDICTED: transcriptional activator DEMETER...    91   2e-15
ref|XP_004161268.1| PREDICTED: uncharacterized protein LOC101230...    91   2e-15

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score =  116 bits (291), Expect = 4e-23
 Identities = 56/77 (72%), Positives = 60/77 (77%)
 Frame = +2

Query: 803  PKCSSLRVFGCTCFVLRPHVERIKLSSSSVVCVFLGYGEGK*GYHCFDPTSHKLYVSCHV 982
            P  SS RVFGCT FVL PHVER KLSS S +CVFLGYGEGK GY CFDP + KLYVS HV
Sbjct: 699  PDYSSFRVFGCTYFVLHPHVERNKLSSRSAICVFLGYGEGKKGYRCFDPITQKLYVSHHV 758

Query: 983  VFL*HIHLFSIPSSNHN 1033
            VFL HI  FSIPS+ H+
Sbjct: 759  VFLEHIPFFSIPSTTHS 775



 Score = 67.0 bits (162), Expect = 4e-08
 Identities = 34/54 (62%), Positives = 36/54 (66%)
 Frame = +1

Query: 1306 FEPLSYKEAVTDHLRQCAMSE*LSALQKNHTWDLVPLIHNKFPIGSHWVYKINT 1467
            FEP SYKEA+ D L Q AM E LSAL K  TWDLVPL   K  +G  WVYKI T
Sbjct: 873  FEPSSYKEAILDPLGQQAMDEELSALHKTDTWDLVPLPPGKSVVGCRWVYKIKT 926


>emb|CAN80083.1| hypothetical protein VITISV_011293 [Vitis vinifera]
          Length = 777

 Score = 68.2 bits (165), Expect(3) = 5e-22
 Identities = 35/65 (53%), Positives = 40/65 (61%)
 Frame = +2

Query: 803 PKCSSLRVFGCTCFVLRPHVERIKLSSSSVVCVFLGYGEGK*GYHCFDPTSHKLYVSCHV 982
           P    LR FG  CFVL    E  KL S S +C FLGYGE + GY C+DP SH+L VS +V
Sbjct: 109 PNYHHLRSFGSACFVLLQPHEHNKLESRSRLCCFLGYGETQKGYRCYDPVSHRLRVSRNV 168

Query: 983 VFL*H 997
           VF  H
Sbjct: 169 VFWEH 173



 Score = 62.8 bits (151), Expect(3) = 5e-22
 Identities = 30/53 (56%), Positives = 35/53 (66%)
 Frame = +1

Query: 1309 EPLSYKEAVTDHLRQCAMSE*LSALQKNHTWDLVPLIHNKFPIGSHWVYKINT 1467
            EP +Y+EA TD L Q AM E L AL KNHTWDLV L   +  +G  W+YKI T
Sbjct: 269  EPQTYREASTDPLWQIAMKEELDALTKNHTWDLVTLFPGQSVVGCKWIYKIKT 321



 Score = 22.7 bits (47), Expect(3) = 5e-22
 Identities = 18/57 (31%), Positives = 21/57 (36%)
 Frame = +3

Query: 1044 SDVINIVPYTVHTSTR*TSVPHIVKEPDIEARSLETSTPPFTAAPYPPEIGD*PRHS 1214
            S V+ I P      +  T  PH+   PDI   S      P  A P  P     P HS
Sbjct: 189  SSVLEIFPDESLVPSTHTFDPHLDFSPDIFDASPRQPGSPAPALPEDPPQDIPPGHS 245


>ref|XP_004170551.1| PREDICTED: LOW QUALITY PROTEIN: protein ROS1-like, partial [Cucumis
            sativus]
          Length = 987

 Score = 91.3 bits (225), Expect = 2e-15
 Identities = 44/49 (89%), Positives = 45/49 (91%)
 Frame = -3

Query: 3746 VRLGWVPLQLLPESLQLHILELYPVLESIQ*YL*PRLCKLDQRTLYEFH 3600
            VRLGWVPLQ LPESLQLH+LELYPVLESIQ YL PRLCKLDQRTLYE H
Sbjct: 591  VRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELH 639


>ref|XP_004164145.1| PREDICTED: transcriptional activator DEMETER-like [Cucumis sativus]
          Length = 1736

 Score = 91.3 bits (225), Expect = 2e-15
 Identities = 44/49 (89%), Positives = 45/49 (91%)
 Frame = -3

Query: 3746 VRLGWVPLQLLPESLQLHILELYPVLESIQ*YL*PRLCKLDQRTLYEFH 3600
            VRLGWVPLQ LPESLQLH+LELYPVLESIQ YL PRLCKLDQRTLYE H
Sbjct: 1323 VRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELH 1371


>ref|XP_004161268.1| PREDICTED: uncharacterized protein LOC101230418 [Cucumis sativus]
          Length = 1768

 Score = 91.3 bits (225), Expect = 2e-15
 Identities = 44/49 (89%), Positives = 45/49 (91%)
 Frame = -3

Query: 3746 VRLGWVPLQLLPESLQLHILELYPVLESIQ*YL*PRLCKLDQRTLYEFH 3600
            VRLGWVPLQ LPESLQLH+LELYPVLESIQ YL PRLCKLDQRTLYE H
Sbjct: 1334 VRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELH 1382


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