BLASTX nr result

ID: Atractylodes21_contig00009235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009235
         (1272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136573.1| PREDICTED: zinc finger CCCH domain-containin...   412   e-112
ref|XP_002533458.1| conserved hypothetical protein [Ricinus comm...   410   e-112
ref|XP_002279071.1| PREDICTED: zinc finger CCCH domain-containin...   410   e-112
ref|XP_002533457.1| conserved hypothetical protein [Ricinus comm...   407   e-111
ref|XP_004146386.1| PREDICTED: zinc finger CCCH domain-containin...   406   e-111

>ref|XP_004136573.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
           [Cucumis sativus]
          Length = 296

 Score =  412 bits (1058), Expect = e-112
 Identities = 210/300 (70%), Positives = 238/300 (79%), Gaps = 8/300 (2%)
 Frame = +2

Query: 98  MDTRKRGRPEA--KANGGAKKFKSELQSLG----SKSKPCMKFFSMDGCPFGENCHFLHY 259
           MDTRKRGR E   KANGG KK K +++ L     SKSKPC KF+S  GCPFGE CHFLHY
Sbjct: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60

Query: 260 FPGGYSAVAQMMNLPPTSTG-RNTSAPSN-IQNGSSAPATKSKMCNKYNTAEGCKFGDKC 433
            PGGY+AVAQMMNLPP     RN  AP   + NGS+  A KS+MCNKYN+AEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120

Query: 434 HFAHGAWELGKPIVSPHEEPRTLGHIPSRFGGHMEPPAPPGVAASFGASATAKISVDASL 613
           HFAH  WELGKP    H++PR++GHIP+R    M+   PPG+AASFGAS+TAKISVDASL
Sbjct: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDA-GPPGLAASFGASSTAKISVDASL 179

Query: 614 AGAIIGKGGVNSKQICRQTGAKLAIRDHESDANLRNIELEGTFDQIKEASAMVRELIVSV 793
           AGAIIGKGG+NSKQICR+TGAKL+IRDHESD NLRNIELEG+FDQIKEASAMV+ELIV+V
Sbjct: 180 AGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTV 239

Query: 794 GSAAGGPPVKPPGMHHGTPPIAPMSNYKTKMCENFAKGSCTFGERCHFAHGAAELRKTGV 973
             A  GPP    G   GT   A  +N+KTK+C+NFAKGSCTFGERCHFAHGAAELRK+GV
Sbjct: 240 SMA--GPPKSATGATGGTAGPAG-NNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 296


>ref|XP_002533458.1| conserved hypothetical protein [Ricinus communis]
           gi|223526691|gb|EEF28927.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 295

 Score =  410 bits (1055), Expect = e-112
 Identities = 208/299 (69%), Positives = 235/299 (78%), Gaps = 7/299 (2%)
 Frame = +2

Query: 98  MDTRKRGRPEAKANGGAKKFKSELQS----LGSKSKPCMKFFSMDGCPFGENCHFLHYFP 265
           MD RKRGR +   NGG KK + E+ S    +GSKSKPC KFFS  GCPFGE+CHFLHY P
Sbjct: 2   MDIRKRGRNDFNVNGGFKKSRKEMDSFSTGVGSKSKPCTKFFSTAGCPFGESCHFLHYVP 61

Query: 266 GGYSAVAQMMNLPP--TSTGRNTSAPSN-IQNGSSAPATKSKMCNKYNTAEGCKFGDKCH 436
           GGY+AVAQMMNL P  TS  RN  APS  I NGS+  A KS++CNKYNTAEGCKFGDKC+
Sbjct: 62  GGYNAVAQMMNLGPAVTSIPRNMPAPSPAIPNGSAPSAVKSRLCNKYNTAEGCKFGDKCN 121

Query: 437 FAHGAWELGKPIVSPHEEPRTLGHIPSRFGGHMEPPAPPGVAASFGASATAKISVDASLA 616
           FAHG WELGKP+V  H++PR  G IP R GG MEPP PPG AASFGASATAKISV+ASLA
Sbjct: 122 FAHGEWELGKPVVPSHDDPRAFGTIPGRMGGRMEPP-PPGSAASFGASATAKISVEASLA 180

Query: 617 GAIIGKGGVNSKQICRQTGAKLAIRDHESDANLRNIELEGTFDQIKEASAMVRELIVSVG 796
           GAIIGKGGVNSKQICRQTGAKL+IR+HE+D N+RNIE EG+F+QIK+ASAMV ELI S+ 
Sbjct: 181 GAIIGKGGVNSKQICRQTGAKLSIREHETDPNVRNIEFEGSFEQIKQASAMVSELIASIS 240

Query: 797 SAAGGPPVKPPGMHHGTPPIAPMSNYKTKMCENFAKGSCTFGERCHFAHGAAELRKTGV 973
           SA            HG P     SN+KTK+CENF+KGSCTFG+RCHFAHGAAELRK+GV
Sbjct: 241 SANASAKATGLIGGHGHPG----SNFKTKLCENFSKGSCTFGQRCHFAHGAAELRKSGV 295


>ref|XP_002279071.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
           isoform 1 [Vitis vinifera]
          Length = 297

 Score =  410 bits (1053), Expect = e-112
 Identities = 213/304 (70%), Positives = 237/304 (77%), Gaps = 12/304 (3%)
 Frame = +2

Query: 98  MDTRKRGRPEA--KANGGAKKFKSELQSL----GSKSKPCMKFFSMDGCPFGENCHFLHY 259
           MDTRKRGRP     ANGG KK K E++SL    GSKSKPC KFFS  GCPFGE+CHFLHY
Sbjct: 1   MDTRKRGRPGGALNANGGFKKSKQEVESLSTGIGSKSKPCTKFFSTSGCPFGESCHFLHY 60

Query: 260 FPGGYSAVAQMMN----LPPTSTGRNTSAPSN-IQNGSSAPATKSKMCNKYNTAEGCKFG 424
            PGGY+AVAQM N    LPP S  RN + P   + NGSS PA KSKMCNK+NTAEGCKFG
Sbjct: 61  VPGGYNAVAQMTNQAPILPPAS--RNMAGPPPPVPNGSSMPAVKSKMCNKFNTAEGCKFG 118

Query: 425 DKCHFAHGAWELGKPIVSPHEEPRTLGHIPSRFGGHMEPPAPPGVAASFGASATAKISVD 604
           DKCHFAHG WELGKP+   H++PR +G IP R  G +EP +P G AASFGASATAKISVD
Sbjct: 119 DKCHFAHGEWELGKPLAPYHDDPRAMGSIPGRLAGRIEP-SPTGPAASFGASATAKISVD 177

Query: 605 ASLAGAIIGKGGVNSKQICRQTGAKLAIRDHESDANLRNIELEGTFDQIKEASAMVRELI 784
           ASLAGAIIGKGGVNSKQICRQTGAKL+IR+H+SD NLRNIELEGTF+QIKEASAMVRELI
Sbjct: 178 ASLAGAIIGKGGVNSKQICRQTGAKLSIREHDSDPNLRNIELEGTFEQIKEASAMVRELI 237

Query: 785 VSVGSAAG-GPPVKPPGMHHGTPPIAPMSNYKTKMCENFAKGSCTFGERCHFAHGAAELR 961
           V++ +  G       PG   G  P  P SNYKTK+C+NF KGSCTFGERCHFAHGA ELR
Sbjct: 238 VNISAMPGHARTTAMPG--GGQAP--PASNYKTKLCDNFTKGSCTFGERCHFAHGAGELR 293

Query: 962 KTGV 973
           K+ +
Sbjct: 294 KSAI 297


>ref|XP_002533457.1| conserved hypothetical protein [Ricinus communis]
           gi|223526690|gb|EEF28926.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 295

 Score =  407 bits (1045), Expect = e-111
 Identities = 208/299 (69%), Positives = 231/299 (77%), Gaps = 7/299 (2%)
 Frame = +2

Query: 98  MDTRKRGRPEAKANGGAKKFKSELQSL----GSKSKPCMKFFSMDGCPFGENCHFLHYFP 265
           MDTRKRGR +  ANGG KK K E+ SL    GSKSKPC KFFS  GCPFGE+CHFLHY P
Sbjct: 2   MDTRKRGRNDFNANGGFKKSKREMDSLSTGVGSKSKPCTKFFSTAGCPFGESCHFLHYVP 61

Query: 266 GGYSAVAQMMNLPP--TSTGRNTSAPSN-IQNGSSAPATKSKMCNKYNTAEGCKFGDKCH 436
           GGY+AVAQMMNL P  TS  RN  APS  I NGS+  A KS+MCNKYNT EGCKFGDKC+
Sbjct: 62  GGYNAVAQMMNLGPAVTSVPRNMPAPSPAIPNGSAPSAVKSRMCNKYNTVEGCKFGDKCN 121

Query: 437 FAHGAWELGKPIVSPHEEPRTLGHIPSRFGGHMEPPAPPGVAASFGASATAKISVDASLA 616
           FAHG WELGK +   H++PR  G    R GG MEPP PPG AASFGASATAKISV+ASLA
Sbjct: 122 FAHGEWELGKSMAPSHDDPRAFGTFAGRMGGRMEPP-PPGPAASFGASATAKISVEASLA 180

Query: 617 GAIIGKGGVNSKQICRQTGAKLAIRDHESDANLRNIELEGTFDQIKEASAMVRELIVSVG 796
           GAIIGKGGVNSKQICRQTGAKL+IR+HE+D NLRNIE EG+F+QIK+ASAMV ELI S+ 
Sbjct: 181 GAIIGKGGVNSKQICRQTGAKLSIREHETDPNLRNIEFEGSFEQIKQASAMVSELIASIS 240

Query: 797 SAAGGPPVKPPGMHHGTPPIAPMSNYKTKMCENFAKGSCTFGERCHFAHGAAELRKTGV 973
           S             HG P     SN+KTK+CENF+KGSCTFG+RCHFAHGAAELRK+GV
Sbjct: 241 SVNASAKATGLTGGHGHPG----SNFKTKLCENFSKGSCTFGQRCHFAHGAAELRKSGV 295


>ref|XP_004146386.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
           [Cucumis sativus] gi|449480828|ref|XP_004156007.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           14-like [Cucumis sativus]
          Length = 305

 Score =  406 bits (1044), Expect = e-111
 Identities = 213/310 (68%), Positives = 238/310 (76%), Gaps = 18/310 (5%)
 Frame = +2

Query: 98  MDTRKRGRPEA--KANGGAKKFKSELQSL---GSKSKPCMKFFSMDGCPFGENCHFLHYF 262
           MD RKRGRPEA   +NG  KK K EL+SL   GSKSKPC KFFS  GCPFGE+CHFLHY 
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 263 PGGYSAVAQMMNLPPTST--GRNTSAPSNIQNGS-SAPA-TKSKMCNKYNTAEGCKFGDK 430
           PGGY+ VAQMMNL P      RN +AP ++ NG  SAP+  K++MCNKYNTAEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGDK 120

Query: 431 CHFAHGAWELGKPIVSPHEEPRTLG---------HIPSRFGGHMEPPAPPGVAASFGASA 583
           C+FAHG WELG+P    H+ PR +G         H+  R GG M+ P PPG AASFGASA
Sbjct: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLP-PPGPAASFGASA 179

Query: 584 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLAIRDHESDANLRNIELEGTFDQIKEAS 763
           TAKIS+DASLAGAIIGKGG+NSKQICRQTGAKL+IRDHESD NLRNIELEGTF+QI EAS
Sbjct: 180 TAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEAS 239

Query: 764 AMVRELIVSVGSAAGGPPVKPPGMHHGTPPIAPMSNYKTKMCENFAKGSCTFGERCHFAH 943
           AMVRELI++V  A  GP     GM  G  P    SNYKTK+C+NFAKGSCTFGERCHFAH
Sbjct: 240 AMVRELIITVSMA--GPGKASGGMGGGPAPTG--SNYKTKLCDNFAKGSCTFGERCHFAH 295

Query: 944 GAAELRKTGV 973
           GAAELRK+GV
Sbjct: 296 GAAELRKSGV 305


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