BLASTX nr result

ID: Atractylodes21_contig00009231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009231
         (943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Po...   117   5e-24
gb|ABN10530.1| Lhca5 protein [Gentiana lutea]                         115   1e-23
ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4...   114   3e-23
ref|NP_175137.1| photosystem I light harvesting complex protein ...   110   5e-22
ref|XP_002891322.1| light-harvesting complex protein [Arabidopsi...   110   5e-22

>ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Populus trichocarpa]
           gi|222835451|gb|EEE73886.1| light-harvesting complex I
           protein Lhca5 [Populus trichocarpa]
          Length = 266

 Score =  117 bits (292), Expect = 5e-24
 Identities = 58/66 (87%), Positives = 61/66 (92%)
 Frame = +2

Query: 155 AELVHARFAMAGVAGILFTDLLRVTGISSLPVWYEAGATKFGFASTRTLFIVQLLLMGFA 334
           AELVHARFAMAGVAGILFTDLLRVTGI  LPVWYEAGA KF FASTRTL +VQLLLMGFA
Sbjct: 98  AELVHARFAMAGVAGILFTDLLRVTGIRKLPVWYEAGAVKFEFASTRTLIVVQLLLMGFA 157

Query: 335 ETKRWL 352
           ETKR++
Sbjct: 158 ETKRYM 163


>gb|ABN10530.1| Lhca5 protein [Gentiana lutea]
          Length = 272

 Score =  115 bits (289), Expect = 1e-23
 Identities = 57/72 (79%), Positives = 64/72 (88%)
 Frame = +2

Query: 155 AELVHARFAMAGVAGILFTDLLRVTGISSLPVWYEAGATKFGFASTRTLFIVQLLLMGFA 334
           AELVH+RFAMAGVAGILFTDLLR TG+S+LPVWYEAGATKF FA+T TLFIVQ+LLMGF 
Sbjct: 105 AELVHSRFAMAGVAGILFTDLLRTTGLSNLPVWYEAGATKFQFANTTTLFIVQMLLMGFV 164

Query: 335 ETKRWLVNMNVG 370
           ETKR++   N G
Sbjct: 165 ETKRYMDFKNPG 176


>ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
           vinifera] gi|302142320|emb|CBI19523.3| unnamed protein
           product [Vitis vinifera]
          Length = 264

 Score =  114 bits (285), Expect = 3e-23
 Identities = 58/72 (80%), Positives = 62/72 (86%)
 Frame = +2

Query: 155 AELVHARFAMAGVAGILFTDLLRVTGISSLPVWYEAGATKFGFASTRTLFIVQLLLMGFA 334
           AELVHARFAMAGVAGIL TDLLRVTGIS+LPVWYEAGA KF FAST  LFIVQL+LMGF 
Sbjct: 97  AELVHARFAMAGVAGILVTDLLRVTGISNLPVWYEAGAVKFEFASTEALFIVQLILMGFV 156

Query: 335 ETKRWLVNMNVG 370
           ETKR++   N G
Sbjct: 157 ETKRYMDFTNPG 168


>ref|NP_175137.1| photosystem I light harvesting complex protein 5 [Arabidopsis
           thaliana] gi|30693978|ref|NP_849778.1| photosystem I
           light harvesting complex protein 5 [Arabidopsis
           thaliana] gi|12321000|gb|AAG50618.1|AC083835_3
           light-harvesting complex protein [Arabidopsis thaliana]
           gi|17063199|gb|AAL32974.1| At1g45474/F2G19.4
           [Arabidopsis thaliana] gi|19699116|gb|AAL90924.1|
           At1g45474/F2G19.4 [Arabidopsis thaliana]
           gi|62320735|dbj|BAD95402.1| light-harvesting complex
           protein [Arabidopsis thaliana]
           gi|332193996|gb|AEE32117.1| photosystem I light
           harvesting complex protein 5 [Arabidopsis thaliana]
           gi|332193997|gb|AEE32118.1| photosystem I light
           harvesting complex protein 5 [Arabidopsis thaliana]
          Length = 256

 Score =  110 bits (275), Expect = 5e-22
 Identities = 53/66 (80%), Positives = 59/66 (89%)
 Frame = +2

Query: 155 AELVHARFAMAGVAGILFTDLLRVTGISSLPVWYEAGATKFGFASTRTLFIVQLLLMGFA 334
           AELVH+RFAM GVAGILFTDLLR TGI +LPVWYEAGA KF FAST+TL +VQ LLMGFA
Sbjct: 87  AELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFA 146

Query: 335 ETKRWL 352
           ETKR++
Sbjct: 147 ETKRYM 152


>ref|XP_002891322.1| light-harvesting complex protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337164|gb|EFH67581.1| light-harvesting complex
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 256

 Score =  110 bits (275), Expect = 5e-22
 Identities = 54/72 (75%), Positives = 62/72 (86%)
 Frame = +2

Query: 155 AELVHARFAMAGVAGILFTDLLRVTGISSLPVWYEAGATKFGFASTRTLFIVQLLLMGFA 334
           AELVH+RFAM GVAGILFTDLLR TGI +LPVWYEAGA KF FAST+TL +VQ LLMGFA
Sbjct: 87  AELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFA 146

Query: 335 ETKRWLVNMNVG 370
           ETKR++  ++ G
Sbjct: 147 ETKRYVDYVSPG 158


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