BLASTX nr result

ID: Atractylodes21_contig00009208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009208
         (1971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277771.2| PREDICTED: poly(A) RNA polymerase GLD2-like ...   435   e-119
ref|XP_002524216.1| zinc finger protein, putative [Ricinus commu...   432   e-118
ref|XP_003552863.1| PREDICTED: poly(A) RNA polymerase cid11-like...   412   e-112
ref|XP_004150639.1| PREDICTED: poly(A) RNA polymerase GLD2-like ...   408   e-111
ref|XP_003537469.1| PREDICTED: poly(A) RNA polymerase GLD2-like ...   398   e-108

>ref|XP_002277771.2| PREDICTED: poly(A) RNA polymerase GLD2-like [Vitis vinifera]
            gi|296086183|emb|CBI31624.3| unnamed protein product
            [Vitis vinifera]
          Length = 453

 Score =  435 bits (1118), Expect = e-119
 Identities = 216/376 (57%), Positives = 277/376 (73%), Gaps = 5/376 (1%)
 Frame = +1

Query: 340  MNSHYSLELTLRDILHVLNPTEDDWSKRFQIINHLRAVVETLDVLRGATVEPFGSFVSNL 519
            M++   LE+ L+DIL V+NP+ +DW+ R Q+I   R  V++++ LRGATVEPFGSF+SNL
Sbjct: 1    MSTFNVLEIVLKDILLVINPSREDWAIRNQLIADFRTAVDSVESLRGATVEPFGSFLSNL 60

Query: 520  FTRWGDLDVSIELPNGSYISAAGKKYKQSLLLEILKALRIKGGFHGMKYISHARVPILKC 699
            +T+WGDLD+SIELPNG+YIS+AGK++KQ+LL  +L ALR KGG+  +++I +ARVPI+K 
Sbjct: 61   YTQWGDLDISIELPNGAYISSAGKRHKQTLLGHVLNALRSKGGWRKLQFIPNARVPIIKF 120

Query: 700  DSNKDNISCDISINNLSGQMKSKLLFWVNAIDGRFREMVLLVKEWAKAHGINDSKTGTLN 879
            +S   NISCD+SINNL GQMKSK LFW++ IDGRFR++VLLVKEWA+AH IN+SKTGTLN
Sbjct: 121  ESYHPNISCDVSINNLKGQMKSKFLFWISGIDGRFRDLVLLVKEWARAHDINNSKTGTLN 180

Query: 880  SYSLSLLVIFHFQTCEPAIIPPLSKIYPGNMVAELTGVRAVAEKNIEDICGVXXXXXXXX 1059
            SYSLSLLV+FH QTC PAI+PPL +IYPGN+  +L GVRAV E  IE+            
Sbjct: 181  SYSLSLLVVFHLQTCRPAILPPLKEIYPGNVADDLIGVRAVVEGQIEETSAANINRFKRD 240

Query: 1060 XXXXXXXXXLADLFVSFLAKFCDISLRASSQGISPYNGQWEDIHTNMIWQPKTYALFIED 1239
                     L++LF+SFLAKF DI+ RAS QGI PY GQW DI +NM W P+TY LF+ED
Sbjct: 241  RSRAPNRSSLSELFISFLAKFVDITSRASEQGICPYTGQWVDIDSNMRWMPRTYELFVED 300

Query: 1240 PFEQPLNCARAVSQRNLLKISQTFQSSHQKLTSANQNHP--LTVLVRPEVLSIISRSQVA 1413
            PFEQP N AR V  R L +IS+ FQ++HQ+LTSANQ+    +  LVRP++   I R+   
Sbjct: 301  PFEQPENTARGVRSRQLQRISEAFQTTHQRLTSANQDQHSLIDTLVRPQIAQFIRRAPSR 360

Query: 1414 NFSNIG---VRIHPQV 1452
            N S  G    R +P V
Sbjct: 361  NSSAYGRNNSRTYPSV 376


>ref|XP_002524216.1| zinc finger protein, putative [Ricinus communis]
            gi|223536493|gb|EEF38140.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 493

 Score =  432 bits (1110), Expect = e-118
 Identities = 219/379 (57%), Positives = 276/379 (72%), Gaps = 5/379 (1%)
 Frame = +1

Query: 340  MNSHYSLELTLRDILHVLNPTEDDWSKRFQIINHLRAVVETLDVLRGATVEPFGSFVSNL 519
            MN+H  LE  LRD L V+ P  +DW+ R +II  L+ V+ +++ LRGATVEPFGSFVSNL
Sbjct: 1    MNAHSVLEPILRDTLEVIKPLREDWAVRSKIIEELKDVIASIESLRGATVEPFGSFVSNL 60

Query: 520  FTRWGDLDVSIELPNGSYISAAGKKYKQSLLLEILKALRIKGGFHGMKYISHARVPILKC 699
            FTRWGDLD+SI L NGSYIS+A KK KQ++L E  KALR KGG+  ++++ +ARVP+LK 
Sbjct: 61   FTRWGDLDISIMLANGSYISSAAKKRKQNVLREFHKALRQKGGWRRLQFVPNARVPLLKF 120

Query: 700  DSNKDNISCDISINNLSGQMKSKLLFWVNAIDGRFREMVLLVKEWAKAHGINDSKTGTLN 879
            +S + NISCD+SI+NL GQ+KS  LFW+N IDGRFR+MVLLVKEWAKAH IN+ KTGTLN
Sbjct: 121  ESGRQNISCDVSIDNLQGQIKSNFLFWLNQIDGRFRDMVLLVKEWAKAHNINNPKTGTLN 180

Query: 880  SYSLSLLVIFHFQTCEPAIIPPLSKIYPGNMVAELTGVRAVAEKNIEDICGVXXXXXXXX 1059
            SYSLSLLVIFHFQTC PAI+PPL +IYP N+V +LTGVR VAE+ I++ C          
Sbjct: 181  SYSLSLLVIFHFQTCVPAILPPLKEIYPRNVVDDLTGVRTVAEERIKETCNANIARYMSD 240

Query: 1060 XXXXXXXXXLADLFVSFLAKFCDISLRASSQGISPYNGQWEDIHTNMIWQPKTYALFIED 1239
                     L++LF+SF AKF  ISL+A+  GI  + GQW DI + M W PKTYALFIED
Sbjct: 241  KYRAVNRSSLSELFISFFAKFSGISLKAADLGICTFTGQWLDIRSTMRWLPKTYALFIED 300

Query: 1240 PFEQPLNCARAVSQRNLLKISQTFQSSHQKLTSANQNHP--LTVLVRPEVLSIISRSQVA 1413
            PFEQP N ARAVS  NL+KI++ FQ+++ KL  ANQN    L  LVRPE+L+ I+ + V 
Sbjct: 301  PFEQPENAARAVSAGNLVKIAEAFQTTYHKLVLANQNRTSLLGTLVRPEILNCIAGTPVR 360

Query: 1414 NFSNIGVR---IHPQVHRN 1461
            N S   +     HPQ+ ++
Sbjct: 361  NLSYTSLHYQSTHPQISKS 379


>ref|XP_003552863.1| PREDICTED: poly(A) RNA polymerase cid11-like [Glycine max]
          Length = 415

 Score =  412 bits (1058), Expect = e-112
 Identities = 203/337 (60%), Positives = 248/337 (73%)
 Frame = +1

Query: 340  MNSHYSLELTLRDILHVLNPTEDDWSKRFQIINHLRAVVETLDVLRGATVEPFGSFVSNL 519
            M++H +L++ + DIL V+ P ++DW  RF IIN LR++VE+++ LRGATVEPFGSFVSNL
Sbjct: 1    MSTHSTLDIVVNDILRVVTPVQEDWEIRFAIINDLRSIVESVESLRGATVEPFGSFVSNL 60

Query: 520  FTRWGDLDVSIELPNGSYISAAGKKYKQSLLLEILKALRIKGGFHGMKYISHARVPILKC 699
            FTRWGDLD+SIEL NG +IS+AGKK KQ+ L ++LKALR+KGG   +++IS+ARVPILK 
Sbjct: 61   FTRWGDLDISIELSNGLHISSAGKKQKQTFLGDVLKALRMKGGGSNLQFISNARVPILKF 120

Query: 700  DSNKDNISCDISINNLSGQMKSKLLFWVNAIDGRFREMVLLVKEWAKAHGINDSKTGTLN 879
             S +  +SCDISINNL GQMKSK+L W+N IDGRFR MVLLVKEWAKAH IN+SK GT N
Sbjct: 121  KSYRQGVSCDISINNLPGQMKSKILLWINKIDGRFRHMVLLVKEWAKAHKINNSKAGTFN 180

Query: 880  SYSLSLLVIFHFQTCEPAIIPPLSKIYPGNMVAELTGVRAVAEKNIEDICGVXXXXXXXX 1059
            SYSLSLLVIF+FQTC PAI PPL  IYPGNMV +L GVR+ AE  I   C          
Sbjct: 181  SYSLSLLVIFYFQTCIPAIFPPLKDIYPGNMVDDLIGVRSDAENLIAQTCDANINRFISN 240

Query: 1060 XXXXXXXXXLADLFVSFLAKFCDISLRASSQGISPYNGQWEDIHTNMIWQPKTYALFIED 1239
                     +A+LFV F+ KF  +   A   GI PY+G+WE I  NMIW PKTYA+F+ED
Sbjct: 241  RARSINRKSVAELFVEFIGKFAKMDSMAVKMGICPYSGKWEQIEDNMIWLPKTYAIFVED 300

Query: 1240 PFEQPLNCARAVSQRNLLKISQTFQSSHQKLTSANQN 1350
            PFEQP N AR+VS   L KI++ F  +H  LTS NQN
Sbjct: 301  PFEQPQNTARSVSAGQLKKITEAFARTHDLLTSTNQN 337


>ref|XP_004150639.1| PREDICTED: poly(A) RNA polymerase GLD2-like [Cucumis sativus]
            gi|449516431|ref|XP_004165250.1| PREDICTED: poly(A) RNA
            polymerase GLD2-like [Cucumis sativus]
          Length = 464

 Score =  408 bits (1048), Expect = e-111
 Identities = 213/376 (56%), Positives = 262/376 (69%), Gaps = 8/376 (2%)
 Frame = +1

Query: 355  SLELTLRDILHVLNPTEDDWSKRFQIINHLRAVVETLDVLRGATVEPFGSFVSNLFTRWG 534
            +L+  ++DIL V+ P +DDW+ RFQ+IN LR VV++++ LRGAT+EPFGSFVSNLF+RWG
Sbjct: 5    TLDRVIKDILRVVEPLQDDWTARFQVINELRNVVQSIESLRGATIEPFGSFVSNLFSRWG 64

Query: 535  DLDVSIELPNGSYISAAGKKYKQSLLLEILKALRIKGGFHGMKYISHARVPILKCDSNKD 714
            DLD+S++L NGSY S AGKK KQ+LL +I  A R  G ++ ++ I HARVPILK +  + 
Sbjct: 65   DLDLSVQLNNGSYTSTAGKKRKQTLLRDIQNASRKNGRWYKLQLIPHARVPILKIEHIQH 124

Query: 715  NISCDISINNLSGQMKSKLLFWVNAIDGRFREMVLLVKEWAKAHGINDSKTGTLNSYSLS 894
            NISCDISI+NL GQ+KSK+L WVN IDGRF +MVLLVKEWAKAH IN+SK GT NSYSLS
Sbjct: 125  NISCDISIDNLVGQIKSKILLWVNEIDGRFHDMVLLVKEWAKAHDINNSKQGTFNSYSLS 184

Query: 895  LLVIFHFQTCEPAIIPPLSKIYPGNMVAELTGVRAVAEKNIEDICGVXXXXXXXXXXXXX 1074
            LLVIFHFQTC PAI PPL  IYPGN+V  L GVRA  E  I   C               
Sbjct: 185  LLVIFHFQTCSPAIFPPLRDIYPGNVVDNLKGVRAEVENEIARTCAT---NIARFKSRTA 241

Query: 1075 XXXXLADLFVSFLAKFCDISLRASSQGISPYNGQWEDIHTNMIWQPKTYALFIEDPFEQP 1254
                L++LFVSFLAKF DIS +AS  GI PY GQW  I +NM W PKTYA+F+EDPFEQP
Sbjct: 242  NRSSLSELFVSFLAKFSDISSKASELGICPYTGQWLKIESNMRWLPKTYAIFVEDPFEQP 301

Query: 1255 LNCARAVSQRNLLKISQTFQSSHQKLTSANQNHP--LTVLVRPEVLSIISRSQ------V 1410
             N ARA++ R L++IS+ F+ +H +LTS  QN    L  L RP++  +I  S        
Sbjct: 302  ENTARAINARQLMRISEAFRMTHLRLTSVYQNRSSILNDLARPQISQLIINSSGSASAPA 361

Query: 1411 ANFSNIGVRIHPQVHR 1458
             N  N    I PQVH+
Sbjct: 362  FNVENY-TPIRPQVHQ 376


>ref|XP_003537469.1| PREDICTED: poly(A) RNA polymerase GLD2-like [Glycine max]
          Length = 328

 Score =  398 bits (1023), Expect = e-108
 Identities = 195/324 (60%), Positives = 240/324 (74%)
 Frame = +1

Query: 340  MNSHYSLELTLRDILHVLNPTEDDWSKRFQIINHLRAVVETLDVLRGATVEPFGSFVSNL 519
            M++H  L++ + DIL V+ P ++DW  RF IIN  R++VE+++ LRGATVEP+GSFVSNL
Sbjct: 1    MSTHSMLDIVVNDILRVVTPLQEDWEIRFAIINDFRSIVESVESLRGATVEPYGSFVSNL 60

Query: 520  FTRWGDLDVSIELPNGSYISAAGKKYKQSLLLEILKALRIKGGFHGMKYISHARVPILKC 699
            FTRWGDLD+SIEL NG +IS+AGKK KQ+LL E+LKALR+KGG   +++IS+ARVPILK 
Sbjct: 61   FTRWGDLDISIELSNGLHISSAGKKQKQTLLGEVLKALRMKGGGSNLQFISNARVPILKF 120

Query: 700  DSNKDNISCDISINNLSGQMKSKLLFWVNAIDGRFREMVLLVKEWAKAHGINDSKTGTLN 879
             S +  +SCDISINNL GQMKSK+L W+N IDGRFR MVLLVKEWAKAH IN+SK GT N
Sbjct: 121  KSYRQGVSCDISINNLPGQMKSKILLWINKIDGRFRHMVLLVKEWAKAHKINNSKAGTFN 180

Query: 880  SYSLSLLVIFHFQTCEPAIIPPLSKIYPGNMVAELTGVRAVAEKNIEDICGVXXXXXXXX 1059
            SYSLSLLVIF+FQTC PAI PPL  IYPGNM+ +L G+R+ AE  I + C          
Sbjct: 181  SYSLSLLVIFYFQTCIPAIFPPLKDIYPGNMIDDLIGIRSDAENLIAETCDANINRFISN 240

Query: 1060 XXXXXXXXXLADLFVSFLAKFCDISLRASSQGISPYNGQWEDIHTNMIWQPKTYALFIED 1239
                     +A+LFV F+ KF  +   A   GI PY G+WE I  NMIW PKTYA+F+ED
Sbjct: 241  RARSINRKSVAELFVDFVGKFAKMDSMAVEMGICPYTGKWEQIEDNMIWLPKTYAIFVED 300

Query: 1240 PFEQPLNCARAVSQRNLLKISQTF 1311
            PFEQP N AR+VS   L KI++TF
Sbjct: 301  PFEQPQNTARSVSAGQLKKITETF 324


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