BLASTX nr result

ID: Atractylodes21_contig00009159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009159
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloro...    94   1e-17
emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]    94   1e-17
ref|XP_004147884.1| PREDICTED: 30S ribosomal protein S31, chloro...    91   9e-17
ref|XP_002531346.1| structural constituent of ribosome, putative...    91   9e-17
ref|NP_181349.1| 30S ribosomal protein S31 [Arabidopsis thaliana...    91   1e-16

>ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Vitis
           vinifera] gi|297740225|emb|CBI30407.3| unnamed protein
           product [Vitis vinifera]
          Length = 118

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/67 (67%), Positives = 49/67 (73%)
 Frame = +3

Query: 210 PLIYCGRGDKKTAKGKRFNHSFGNARPRNKNKXXXXXXXXXXXXXXXKDRFDDGEVVKIE 389
           P +YCGRGDKKTAKGKRFNHSFGNARPRNK K               KDRF+D EVVKIE
Sbjct: 52  PSVYCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIE 111

Query: 390 INESLFS 410
           I+ESLF+
Sbjct: 112 IDESLFN 118


>emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]
          Length = 117

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/67 (67%), Positives = 49/67 (73%)
 Frame = +3

Query: 210 PLIYCGRGDKKTAKGKRFNHSFGNARPRNKNKXXXXXXXXXXXXXXXKDRFDDGEVVKIE 389
           P +YCGRGDKKTAKGKRFNHSFGNARPRNK K               KDRF+D EVVKIE
Sbjct: 51  PSVYCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIE 110

Query: 390 INESLFS 410
           I+ESLF+
Sbjct: 111 IDESLFN 117


>ref|XP_004147884.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Cucumis
           sativus] gi|449520074|ref|XP_004167059.1| PREDICTED: 30S
           ribosomal protein S31, chloroplastic-like [Cucumis
           sativus]
          Length = 118

 Score = 91.3 bits (225), Expect = 9e-17
 Identities = 49/98 (50%), Positives = 58/98 (59%)
 Frame = +3

Query: 120 TASLSFSHSCSPTAIPXXXXXXXXXXXXXQPLIYCGRGDKKTAKGKRFNHSFGNARPRNK 299
           TASL+ S   SP++IP                IYCGRGDKKT +GKRFNHS+GNARPR+K
Sbjct: 36  TASLAISTPSSPSSIPA---------------IYCGRGDKKTERGKRFNHSYGNARPRDK 80

Query: 300 NKXXXXXXXXXXXXXXXKDRFDDGEVVKIEINESLFSS 413
            K               KD+FDD E +KIEI+ESLF S
Sbjct: 81  TKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS 118


>ref|XP_002531346.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223529044|gb|EEF31030.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 116

 Score = 91.3 bits (225), Expect = 9e-17
 Identities = 49/92 (53%), Positives = 55/92 (59%)
 Frame = +3

Query: 129 LSFSHSCSPTAIPXXXXXXXXXXXXXQPLIYCGRGDKKTAKGKRFNHSFGNARPRNKNKX 308
           +SFS+S     IP              P +YCGRGDKKTAKGKRFNHSFGNARPRNKNK 
Sbjct: 29  ISFSYS-----IPSLSVSTTTASTSPIPFVYCGRGDKKTAKGKRFNHSFGNARPRNKNKG 83

Query: 309 XXXXXXXXXXXXXXKDRFDDGEVVKIEINESL 404
                          D F+DGEVVKI+I+ESL
Sbjct: 84  RGPPRIPVPSSPPTNDIFEDGEVVKIDIDESL 115


>ref|NP_181349.1| 30S ribosomal protein S31 [Arabidopsis thaliana]
           gi|75275034|sp|O80439.1|RR31_ARATH RecName: Full=30S
           ribosomal protein S31, chloroplastic; AltName:
           Full=Plastid-specific 30S ribosomal protein 4;
           Short=PSRP-4; Flags: Precursor
           gi|7578852|gb|AAF64153.1|AF236826_1 plastid-specific
           ribosomal protein 4 precursor [Arabidopsis thaliana]
           gi|3335362|gb|AAC27163.1| 30S ribosomal protein S31
           [Arabidopsis thaliana] gi|15529182|gb|AAK97685.1|
           At2g38140/F16M14.7 [Arabidopsis thaliana]
           gi|16974357|gb|AAL31104.1| At2g38140/F16M14.7
           [Arabidopsis thaliana] gi|21618289|gb|AAM67339.1| 30S
           ribosomal protein S31 [Arabidopsis thaliana]
           gi|330254400|gb|AEC09494.1| 30S ribosomal protein S31
           [Arabidopsis thaliana]
          Length = 118

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 53/118 (44%), Positives = 68/118 (57%), Gaps = 8/118 (6%)
 Frame = +3

Query: 84  MASMAL-----TIVSLPTASLSFSHSCSPTAIPXXXXXXXXXXXXXQ---PLIYCGRGDK 239
           MAS+ L       V+LP++ LS SHS +                      PL+YCGRGD+
Sbjct: 1   MASLILGAPPRVTVALPSSRLSSSHSETAGVSLSCFTHQFSLSTSSSSSIPLVYCGRGDR 60

Query: 240 KTAKGKRFNHSFGNARPRNKNKXXXXXXXXXXXXXXXKDRFDDGEVVKIEINESLFSS 413
           KTAKGKRFNHSFGNARPRNK+K               KD+F++ E +KI+I+ESLFS+
Sbjct: 61  KTAKGKRFNHSFGNARPRNKSKGRGPERVPVPPAPPRKDKFENDEKIKIDIDESLFSN 118


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