BLASTX nr result

ID: Atractylodes21_contig00009131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009131
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23219.3| unnamed protein product [Vitis vinifera]               93   2e-17
ref|XP_002266593.2| PREDICTED: dihydrolipoyllysine-residue succi...    90   2e-16
ref|XP_002300330.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002529920.1| dihydrolipoamide succinyltransferase compone...    74   1e-11
ref|XP_002317337.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11

>emb|CBI23219.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 62/127 (48%), Positives = 77/127 (60%), Gaps = 4/127 (3%)
 Frame = -3

Query: 370 IRGMMWAIFRKKVASAGSSALVNNGTVQTLGRARPVFAGSTPQGFVEAILVPKALNLGRG 191
           I G MWAI R+KVAS  S+A V     Q+L + RP  A S P+G+       +AL LG G
Sbjct: 86  IEGTMWAIVRRKVASGSSAASVLG---QSLSKIRPA-AASVPRGYTTT--AKEALLLGGG 139

Query: 190 SQLLRQF----HEGAPVHPLLVRNVVSSLKPSFTTQMWSRSFSSDNGDLVDAVVPFMGES 23
           S+++R      + G+ V    VR V S L+     Q+  R FSSD GDLVDAVVPFMGES
Sbjct: 140 SKIIRNVGHYKYLGSLVSSKPVREVTSFLQIDSPIQVQHRPFSSDKGDLVDAVVPFMGES 199

Query: 22  ITDGTLA 2
           I+DGTLA
Sbjct: 200 ISDGTLA 206


>ref|XP_002266593.2| PREDICTED: dihydrolipoyllysine-residue succinyltransferase
           component of 2-oxoglutarate dehydrogenase complex 2,
           mitochondrial [Vitis vinifera]
          Length = 473

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 60/123 (48%), Positives = 75/123 (60%), Gaps = 4/123 (3%)
 Frame = -3

Query: 358 MWAIFRKKVASAGSSALVNNGTVQTLGRARPVFAGSTPQGFVEAILVPKALNLGRGSQLL 179
           MWAI R+KVAS  S+A V     Q+L + RP  A S P+G+       +AL LG GS+++
Sbjct: 1   MWAIVRRKVASGSSAASVLG---QSLSKIRPA-AASVPRGYTTT--AKEALLLGGGSKII 54

Query: 178 RQF----HEGAPVHPLLVRNVVSSLKPSFTTQMWSRSFSSDNGDLVDAVVPFMGESITDG 11
           R      + G+ V    VR V S L+     Q+  R FSSD GDLVDAVVPFMGESI+DG
Sbjct: 55  RNVGHYKYLGSLVSSKPVREVTSFLQIDSPIQVQHRPFSSDKGDLVDAVVPFMGESISDG 114

Query: 10  TLA 2
           TLA
Sbjct: 115 TLA 117


>ref|XP_002300330.1| predicted protein [Populus trichocarpa] gi|222847588|gb|EEE85135.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 5/124 (4%)
 Frame = -3

Query: 358 MWAIFRKKVASAGSSALVNNGTVQTLGRARPVFAGSTPQGFVEAILVPKALNLGRGSQLL 179
           M+ + R++VA+ G S+  +    Q+L   RP  A S+     + IL        RG + +
Sbjct: 1   MFGVIRRRVANGGLSSSSSAILRQSLQTIRP--APSSTSRVSDEILTH-----ARGFEHV 53

Query: 178 RQFH-----EGAPVHPLLVRNVVSSLKPSFTTQMWSRSFSSDNGDLVDAVVPFMGESITD 14
           R+F       G  +    VR VVS+++ + + + WSR FSSD GDLVDAVVPFMGESITD
Sbjct: 54  RKFSCFVSPRGRAISSRPVREVVSNMELASSKKTWSRPFSSDTGDLVDAVVPFMGESITD 113

Query: 13  GTLA 2
           GTLA
Sbjct: 114 GTLA 117


>ref|XP_002529920.1| dihydrolipoamide succinyltransferase component of 2-oxoglutarate
           dehydrogenase, putative [Ricinus communis]
           gi|223530597|gb|EEF32474.1| dihydrolipoamide
           succinyltransferase component of 2-oxoglutarate
           dehydrogenase, putative [Ricinus communis]
          Length = 469

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 46/120 (38%), Positives = 62/120 (51%)
 Frame = -3

Query: 361 MMWAIFRKKVASAGSSALVNNGTVQTLGRARPVFAGSTPQGFVEAILVPKALNLGRGSQL 182
           MM  + R++V +  SS+ V   ++QT    +P  +        E  ++     LG     
Sbjct: 1   MMLGVLRRRVTTGASSSSVLRRSLQT---TKPAASAPRVSSLPEKEILLNLRGLGSAGNF 57

Query: 181 LRQFHEGAPVHPLLVRNVVSSLKPSFTTQMWSRSFSSDNGDLVDAVVPFMGESITDGTLA 2
                 G  V    +R+  S +    T Q+W R FSSD+GDLVDAVVPFMGESITDGTLA
Sbjct: 58  STFISSGCSVSSRSIRDASSMMA---TKQVWIRPFSSDSGDLVDAVVPFMGESITDGTLA 114


>ref|XP_002317337.1| predicted protein [Populus trichocarpa] gi|222860402|gb|EEE97949.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 50/119 (42%), Positives = 71/119 (59%)
 Frame = -3

Query: 358 MWAIFRKKVASAGSSALVNNGTVQTLGRARPVFAGSTPQGFVEAILVPKALNLGRGSQLL 179
           M  + R++VAS GSS+  ++   Q+L   RPV + ST +   E ++ P+     R    L
Sbjct: 1   MLGVIRRRVASGGSSSS-SSILKQSLQTIRPV-SSSTSRVSEEILIHPRGFGHVRKFSCL 58

Query: 178 RQFHEGAPVHPLLVRNVVSSLKPSFTTQMWSRSFSSDNGDLVDAVVPFMGESITDGTLA 2
                G  +    +R  VS+++ + +  + SR FSSD+GDLVDAVVPFMGESITDGTLA
Sbjct: 59  APLR-GRAISSRTMREGVSNMELTASKLILSRPFSSDSGDLVDAVVPFMGESITDGTLA 116


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