BLASTX nr result

ID: Atractylodes21_contig00009102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009102
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638382.1| Nuclear transcription factor Y subunit A-7, ...    56   4e-06
ref|XP_003594508.1| F-box family protein [Medicago truncatula] g...    56   4e-06

>ref|XP_003638382.1| Nuclear transcription factor Y subunit A-7, partial [Medicago
           truncatula] gi|355504317|gb|AES85520.1| Nuclear
           transcription factor Y subunit A-7, partial [Medicago
           truncatula]
          Length = 455

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 47/172 (27%), Positives = 71/172 (41%), Gaps = 8/172 (4%)
 Frame = -1

Query: 541 KAWKALIDSPKFIAAYSTCQTQPQHLLIRYGFTVGVEDQYICFVDDDTFPQQKFAPTVPL 362
           K+WK+LI  PKFI  +    T   HL++ +        ++        +P   F   V  
Sbjct: 76  KSWKSLISDPKFIKKHLHVSTTRLHLVLAF---ANSSRKFAL----SAYPLSSFFTDVTS 128

Query: 361 SIKQLQYS-----RMVXXXXXXXXXXXXXXXXGKRMAVLWNPSIR---KSVAIHVPKFDK 206
           +  QL Y      R +                 +R A+LWNPSI+   KS ++  PK D 
Sbjct: 129 TATQLDYPLNNRIRNLFDLIVGSCHGILCFALDQRFALLWNPSIKKFTKSPSLDNPKRDG 188

Query: 205 SSEQPHDVLGFGVCPVNSDPKIVKITHSYIFNNSMSLKTEVYTLSTGEWRTV 50
           S    + + GFG   VN   K+V +      N     + +V+TL T  WR +
Sbjct: 189 S----YTIYGFGYDHVNDIYKVVAVYCFESDNGDYKTQVKVHTLGTNFWRRI 236


>ref|XP_003594508.1| F-box family protein [Medicago truncatula]
           gi|355483556|gb|AES64759.1| F-box family protein
           [Medicago truncatula]
          Length = 597

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 47/172 (27%), Positives = 71/172 (41%), Gaps = 8/172 (4%)
 Frame = -1

Query: 541 KAWKALIDSPKFIAAYSTCQTQPQHLLIRYGFTVGVEDQYICFVDDDTFPQQKFAPTVPL 362
           K+WK+LI  PKFI  +    T   HL++ +        ++        +P   F   V  
Sbjct: 76  KSWKSLISDPKFIKKHLHVSTTRLHLVLAF---ANSSRKFAL----SAYPLSSFFTDVTS 128

Query: 361 SIKQLQYS-----RMVXXXXXXXXXXXXXXXXGKRMAVLWNPSIR---KSVAIHVPKFDK 206
           +  QL Y      R +                 +R A+LWNPSI+   KS ++  PK D 
Sbjct: 129 TATQLDYPLNNRIRNLFDLIVGSCHGILCFALDQRFALLWNPSIKKFTKSPSLDNPKRDG 188

Query: 205 SSEQPHDVLGFGVCPVNSDPKIVKITHSYIFNNSMSLKTEVYTLSTGEWRTV 50
           S    + + GFG   VN   K+V +      N     + +V+TL T  WR +
Sbjct: 189 S----YTIYGFGYDHVNDIYKVVAVYCFESDNGDYKTQVKVHTLGTNFWRRI 236


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