BLASTX nr result

ID: Atractylodes21_contig00008447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00008447
         (1442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533618.1| GTP-binding protein yptv3, putative [Ricinus...   456   e-126
ref|XP_002307133.1| predicted protein [Populus trichocarpa] gi|2...   455   e-125
ref|XP_002310606.1| predicted protein [Populus trichocarpa] gi|2...   453   e-125
ref|XP_002279569.1| PREDICTED: uncharacterized GTP-binding prote...   447   e-123
gb|ACS66798.2| unknown [Dimocarpus longan]                            443   e-122

>ref|XP_002533618.1| GTP-binding protein yptv3, putative [Ricinus communis]
            gi|223526492|gb|EEF28762.1| GTP-binding protein yptv3,
            putative [Ricinus communis]
          Length = 336

 Score =  456 bits (1173), Expect = e-126
 Identities = 233/337 (69%), Positives = 264/337 (78%), Gaps = 2/337 (0%)
 Frame = -1

Query: 1139 MFWREREREINKEQNGGPPCGQVRVLVVGDSGVGKTSLVNLIVKGTSTARPPQTIGCTVD 960
            MFWR+RERE NK+QNGGPPCGQVRVLV GDSGVGKTSLV+LIVKG+STA PPQTIGCTV 
Sbjct: 1    MFWRDRERE-NKDQNGGPPCGQVRVLVAGDSGVGKTSLVHLIVKGSSTAHPPQTIGCTVG 59

Query: 959  VKHFTYGTPXXXXXSIKGDKDREFFIELWDVSGHDRYTDCRSIFYSQINGVIFVHDLSQK 780
            VKH TYG       S+KGD +R+FF+ELWDVSGH+RY DCRS+FYSQINGVIFVHDLSQ+
Sbjct: 60   VKHVTYGNSGSSSSSLKGDAERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQR 119

Query: 779  RTKTSLKKWAAEIAATGTFXXXXXXXXXXXXXXXXXXXGNKADVAAKEGTRGSSGNLVDM 600
            RTKTSL+KWA+EIAATGTF                   GNKADVAAKEGTRGSSGNLVD+
Sbjct: 120  RTKTSLQKWASEIAATGTFSAPLGSGGPCGIPVPYIVIGNKADVAAKEGTRGSSGNLVDV 179

Query: 599  ARQWVEKQGLLPSNEELPLIDSFPGNGGLMAAAKEARYDKESVLKFFRMLVRRRYFSDEL 420
            ARQWVEKQGLLPS+EELPL +SFPG GGL+AAAKEARYDKE++LKFFRML+RRRYFSDEL
Sbjct: 180  ARQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEALLKFFRMLIRRRYFSDEL 239

Query: 419  PTVSPWSTS-VQRPLQRPGDNLSDEDQLYTSTRTSGEAYKYNVLPPLPAQRNXXXXXXXX 243
               SPW+ S  QR +QR  +N SD+DQ Y S R +G+ YKYN+LPPLPAQRN        
Sbjct: 240  TAPSPWTVSPAQRSVQRLDENSSDDDQFYKSKRLTGDPYKYNMLPPLPAQRNLTPPPTLY 299

Query: 242  XXXXXXXPDNYNISKFSLSGVQEL-NSMRSKRNDINV 135
                    +NY+  +FSLS  QEL N+ RSKR DINV
Sbjct: 300  PQQPVSVTENYSFPRFSLSDAQELSNTARSKRLDINV 336


>ref|XP_002307133.1| predicted protein [Populus trichocarpa] gi|222856582|gb|EEE94129.1|
            predicted protein [Populus trichocarpa]
          Length = 336

 Score =  455 bits (1171), Expect = e-125
 Identities = 229/337 (67%), Positives = 265/337 (78%), Gaps = 2/337 (0%)
 Frame = -1

Query: 1139 MFWREREREINKEQNGGPPCGQVRVLVVGDSGVGKTSLVNLIVKGTSTARPPQTIGCTVD 960
            MFWR+RERE NK+QNGGPPCGQVRVL+VGDSGVGKTSLV+LI+K +S ARPPQTIGCTV 
Sbjct: 1    MFWRDRERE-NKDQNGGPPCGQVRVLIVGDSGVGKTSLVHLIIKSSSIARPPQTIGCTVG 59

Query: 959  VKHFTYGTPXXXXXSIKGDKDREFFIELWDVSGHDRYTDCRSIFYSQINGVIFVHDLSQK 780
            VKH TYG       SIKGD +R+FFIELWDVSGH+RY DCRS+FYSQINGVIFVHDLSQ+
Sbjct: 60   VKHITYGNSGSSSSSIKGDSERDFFIELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQR 119

Query: 779  RTKTSLKKWAAEIAATGTFXXXXXXXXXXXXXXXXXXXGNKADVAAKEGTRGSSGNLVDM 600
            RTKTSL+KWA+EIAATGTF                    NKADVAAKEGTRGSSGNLVD 
Sbjct: 120  RTKTSLQKWASEIAATGTFSAPLSSGGPGGLPVPYIVVSNKADVAAKEGTRGSSGNLVDA 179

Query: 599  ARQWVEKQGLLPSNEELPLIDSFPGNGGLMAAAKEARYDKESVLKFFRMLVRRRYFSDEL 420
            AR WVEKQGLLPS+EE+PL +SFPG+GGL++AAKEARYDKE+V++FFRML+RRRYFSDEL
Sbjct: 180  ARHWVEKQGLLPSSEEIPLTESFPGSGGLISAAKEARYDKEAVVRFFRMLIRRRYFSDEL 239

Query: 419  PTVSPWSTS-VQRPLQRPGDNLSDEDQLYTSTRTSGEAYKYNVLPPLPAQRNXXXXXXXX 243
            P  SPWS S VQR +QR  +N+SDED  Y +T  +G++YKYN+LPPLPAQRN        
Sbjct: 240  PASSPWSASPVQRSVQRLDENISDEDPFYKATSLAGDSYKYNMLPPLPAQRNLTPPPTLY 299

Query: 242  XXXXXXXPDNYNISKFSLSGVQEL-NSMRSKRNDINV 135
                    ++Y I +F LSG QE+ N+ RSKR DINV
Sbjct: 300  PQQPVSVRESYGIPRFPLSGSQEISNTARSKRMDINV 336


>ref|XP_002310606.1| predicted protein [Populus trichocarpa] gi|222853509|gb|EEE91056.1|
            predicted protein [Populus trichocarpa]
          Length = 336

 Score =  453 bits (1165), Expect = e-125
 Identities = 230/337 (68%), Positives = 265/337 (78%), Gaps = 2/337 (0%)
 Frame = -1

Query: 1139 MFWREREREINKEQNGGPPCGQVRVLVVGDSGVGKTSLVNLIVKGTSTARPPQTIGCTVD 960
            MFWR+RERE NK+QNGGPPCGQVRVLVVGDSGVGKTSLV+LIVKG+S+ARPPQTIGCTV 
Sbjct: 1    MFWRDRERE-NKDQNGGPPCGQVRVLVVGDSGVGKTSLVHLIVKGSSSARPPQTIGCTVG 59

Query: 959  VKHFTYGTPXXXXXSIKGDKDREFFIELWDVSGHDRYTDCRSIFYSQINGVIFVHDLSQK 780
            VKH +YG       SIKGD +R+FF+ELWDVSGHDRY DCRS+FYSQINGVIFVHDLSQ+
Sbjct: 60   VKHISYGNSSSSSSSIKGDSERDFFVELWDVSGHDRYKDCRSLFYSQINGVIFVHDLSQR 119

Query: 779  RTKTSLKKWAAEIAATGTFXXXXXXXXXXXXXXXXXXXGNKADVAAKEGTRGSSGNLVDM 600
            RTKTSL+KWA+EIAATGTF                   GNK+DVAAKEGTRGSSGNLVD 
Sbjct: 120  RTKTSLQKWASEIAATGTFSAPLSSGGPGGLPVPYIVIGNKSDVAAKEGTRGSSGNLVDA 179

Query: 599  ARQWVEKQGLLPSNEELPLIDSFPGNGGLMAAAKEARYDKESVLKFFRMLVRRRYFSDEL 420
            ARQWVEKQGLLPS+EE+PL +SFPG+GGL+AAAKEARYDKE+V+KFFR L+RRRYFSDEL
Sbjct: 180  ARQWVEKQGLLPSSEEIPLTESFPGSGGLIAAAKEARYDKEAVVKFFRTLIRRRYFSDEL 239

Query: 419  PTVSPWST-SVQRPLQRPGDNLSDEDQLYTSTRTSGEAYKYNVLPPLPAQRNXXXXXXXX 243
            P  SPWS   VQR +QR  +N SDED  Y +T  +G+ YKYN LPPLPAQRN        
Sbjct: 240  PAPSPWSAYPVQRSVQRLDENTSDEDPFYKTTSLAGDPYKYNTLPPLPAQRNLTPPPTLY 299

Query: 242  XXXXXXXPDNYNISKFSLSGVQEL-NSMRSKRNDINV 135
                    ++Y+I +F+L+G QE+ N+ R KR DINV
Sbjct: 300  PQQPVSVTESYSIPRFTLTGSQEISNTARLKRMDINV 336


>ref|XP_002279569.1| PREDICTED: uncharacterized GTP-binding protein At5g64813 [Vitis
            vinifera] gi|147843269|emb|CAN80534.1| hypothetical
            protein VITISV_035973 [Vitis vinifera]
            gi|296082516|emb|CBI21521.3| unnamed protein product
            [Vitis vinifera]
          Length = 336

 Score =  447 bits (1149), Expect = e-123
 Identities = 221/336 (65%), Positives = 258/336 (76%), Gaps = 1/336 (0%)
 Frame = -1

Query: 1139 MFWREREREINKEQNGGPPCGQVRVLVVGDSGVGKTSLVNLIVKGTSTARPPQTIGCTVD 960
            MFWRER+RE  +   GGPPCGQVRVLVVGDSGVGKTSLV+L+VKG+S  +PPQT+GCTV 
Sbjct: 1    MFWRERDRENKEHNGGGPPCGQVRVLVVGDSGVGKTSLVHLLVKGSSITQPPQTVGCTVG 60

Query: 959  VKHFTYGTPXXXXXSIKGDKDREFFIELWDVSGHDRYTDCRSIFYSQINGVIFVHDLSQK 780
            VKH  YG       SIKGD +R+FFIELWDVSGHDRY +CRS+FYSQINGVIFVHDLSQ+
Sbjct: 61   VKHTAYGNSGSSSNSIKGDSERDFFIELWDVSGHDRYKECRSLFYSQINGVIFVHDLSQR 120

Query: 779  RTKTSLKKWAAEIAATGTFXXXXXXXXXXXXXXXXXXXGNKADVAAKEGTRGSSGNLVDM 600
            RTK SL+KWAAEIAATGTF                   GNK D+AAKEGTRGSSGNLVD+
Sbjct: 121  RTKASLQKWAAEIAATGTFSAPLGSGGPCGLPVPFIVIGNKTDIAAKEGTRGSSGNLVDV 180

Query: 599  ARQWVEKQGLLPSNEELPLIDSFPGNGGLMAAAKEARYDKESVLKFFRMLVRRRYFSDEL 420
            ARQWVEKQGLLPS+EELPL +SFP +GG++AAAKEAR DKE+V+KFFR+L+RRRYFSDEL
Sbjct: 181  ARQWVEKQGLLPSSEELPLTESFPSSGGILAAAKEARVDKEAVMKFFRLLIRRRYFSDEL 240

Query: 419  PTVSPWSTS-VQRPLQRPGDNLSDEDQLYTSTRTSGEAYKYNVLPPLPAQRNXXXXXXXX 243
            P  SPWS S VQ P+QR GDNLS+++Q Y +T   G+ YKYNVLPPLPAQRN        
Sbjct: 241  PAPSPWSISPVQGPIQRAGDNLSEDNQFYKNTSLGGDPYKYNVLPPLPAQRNLTPPPTLY 300

Query: 242  XXXXXXXPDNYNISKFSLSGVQELNSMRSKRNDINV 135
                    +NYN+ +F+L+G  E+ + R KR DINV
Sbjct: 301  PQQPVSVAENYNLPRFALNGSPEIINTRQKRADINV 336


>gb|ACS66798.2| unknown [Dimocarpus longan]
          Length = 338

 Score =  443 bits (1139), Expect = e-122
 Identities = 226/338 (66%), Positives = 262/338 (77%), Gaps = 3/338 (0%)
 Frame = -1

Query: 1139 MFWREREREINKEQNGGPPCGQVRVLVVGDSGVGKTSLVNLIVKGTSTARPPQTIGCTVD 960
            MFWRERERE  ++  GGPP GQ+RVLVVGDSGVGKTSLV+LIVKG+STARPPQTIGCTV 
Sbjct: 1    MFWRERERETKEQNGGGPPSGQIRVLVVGDSGVGKTSLVHLIVKGSSTARPPQTIGCTVG 60

Query: 959  VKHFTYGTPXXXXXSIKGDKDREFFIELWDVSGHDRYTDCRSIFYSQINGVIFVHDLSQK 780
            VKH TYG       SIKGD +R+FF+ELWDVSGH+RY DCRS+FYSQINGVIFVHDLSQ+
Sbjct: 61   VKHLTYGNSGSSSSSIKGDSERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQR 120

Query: 779  RTKTSLKKWAAEIAATGTFXXXXXXXXXXXXXXXXXXXGNKADVAAKEGTRGSSGNLVDM 600
            RTKTSL+KWA+E+AA+GTF                   GNKADVAAKEGTRGSSGNLV++
Sbjct: 121  RTKTSLQKWASEVAASGTFSAPLGSAGPGGLPVPYMVIGNKADVAAKEGTRGSSGNLVEV 180

Query: 599  ARQWVEKQGLLPSNEELPLIDSFPGNGGLMAAAKEARYDKESVLKFFRMLVRRRYFSDEL 420
            ARQWVEKQGLL ++EELPL +SFPG+GG +AAAKEARYDKE+V+KFFRML+RRRYFSDEL
Sbjct: 181  ARQWVEKQGLLSTSEELPLTESFPGSGGAIAAAKEARYDKEAVIKFFRMLIRRRYFSDEL 240

Query: 419  PTVSPWSTS-VQRP-LQRPGDNLSDEDQLYTSTRTSGEAYKYNVLPPLPAQRNXXXXXXX 246
            P  +PWS S  Q+P  QR  +N SDED  Y ST  SG+ YKYN LPPLPAQRN       
Sbjct: 241  PVPNPWSISPAQKPSSQRLDENFSDEDSFYKSTSLSGDPYKYNTLPPLPAQRNLTPPPTL 300

Query: 245  XXXXXXXXPDNYNISKFSLSGVQELNS-MRSKRNDINV 135
                    P+NY++ +FS SG  E++S  RSKR+DINV
Sbjct: 301  YPQQPVSVPENYSLPRFSPSGSSEISSTARSKRSDINV 338


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