BLASTX nr result

ID: Atractylodes21_contig00008352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00008352
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]   292   5e-77
ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi comple...   291   9e-77
emb|CBI38715.3| unnamed protein product [Vitis vinifera]              291   9e-77
ref|XP_003626608.1| Pentatricopeptide repeat-containing protein ...   290   1e-76
ref|XP_002320901.1| predicted protein [Populus trichocarpa] gi|2...   286   2e-75

>emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
          Length = 422

 Score =  292 bits (747), Expect = 5e-77
 Identities = 148/211 (70%), Positives = 174/211 (82%)
 Frame = -2

Query: 634 SPSRIQKLIASQSDPLVAKEIFDLASNASPGFSHSYATFQTLILKLGRSRHFXXXXXXXX 455
           SPSR+QKLIASQSDPL+AKEIFDLAS   P F HSY++F  LILKLG +R F        
Sbjct: 13  SPSRVQKLIASQSDPLLAKEIFDLAS-LQPNFKHSYSSFHILILKLGWARQFSLMQDLLM 71

Query: 454 XXXSDRRYTVTPSLFTHIIRIYGDANLPDKALKTFYTILEFNIKPRTKQLNVILEILVSQ 275
              S++ Y++ PSLF+ II IYG+ANLPD+ALKTF+++L+F+ KP  K LN +L++LVS 
Sbjct: 72  RLKSEQ-YSINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNXLLQLLVSH 130

Query: 274 RNYVRPAFDLFKSAHRYDVSPNVESYNILMRAFCLNGDLSIAYNLFNQMPKRDIVPDVES 95
           RNY+RPAFDLFKSAHRY VSP+ +SYNILM AFC NGDLSIAY LFNQM KRD+ PDVES
Sbjct: 131 RNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVES 190

Query: 94  YRILMQGLCRRSQVNRAVDLLEDMLNKGFVP 2
           YRILMQGLCR+SQVNRAVDLLEDMLNKG+VP
Sbjct: 191 YRILMQGLCRKSQVNRAVDLLEDMLNKGYVP 221


>ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis
           vinifera]
          Length = 1105

 Score =  291 bits (745), Expect = 9e-77
 Identities = 148/211 (70%), Positives = 174/211 (82%)
 Frame = -2

Query: 634 SPSRIQKLIASQSDPLVAKEIFDLASNASPGFSHSYATFQTLILKLGRSRHFXXXXXXXX 455
           SPSR+QKLIASQSDPL+AKEIFDLAS   P F HSY++F  LILKLG +R F        
Sbjct: 44  SPSRVQKLIASQSDPLLAKEIFDLAS-LQPNFKHSYSSFHILILKLGWARQFSLMQDLLM 102

Query: 454 XXXSDRRYTVTPSLFTHIIRIYGDANLPDKALKTFYTILEFNIKPRTKQLNVILEILVSQ 275
              S++ Y++ PSLF+ II IYG+ANLPD+ALKTF+++L+F+ KP  K LN +L++LVS 
Sbjct: 103 RLKSEQ-YSINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNRLLQLLVSH 161

Query: 274 RNYVRPAFDLFKSAHRYDVSPNVESYNILMRAFCLNGDLSIAYNLFNQMPKRDIVPDVES 95
           RNY+RPAFDLFKSAHRY VSP+ +SYNILM AFC NGDLSIAY LFNQM KRD+ PDVES
Sbjct: 162 RNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVES 221

Query: 94  YRILMQGLCRRSQVNRAVDLLEDMLNKGFVP 2
           YRILMQGLCR+SQVNRAVDLLEDMLNKG+VP
Sbjct: 222 YRILMQGLCRKSQVNRAVDLLEDMLNKGYVP 252


>emb|CBI38715.3| unnamed protein product [Vitis vinifera]
          Length = 429

 Score =  291 bits (745), Expect = 9e-77
 Identities = 148/211 (70%), Positives = 174/211 (82%)
 Frame = -2

Query: 634 SPSRIQKLIASQSDPLVAKEIFDLASNASPGFSHSYATFQTLILKLGRSRHFXXXXXXXX 455
           SPSR+QKLIASQSDPL+AKEIFDLAS   P F HSY++F  LILKLG +R F        
Sbjct: 58  SPSRVQKLIASQSDPLLAKEIFDLAS-LQPNFKHSYSSFHILILKLGWARQFSLMQDLLM 116

Query: 454 XXXSDRRYTVTPSLFTHIIRIYGDANLPDKALKTFYTILEFNIKPRTKQLNVILEILVSQ 275
              S++ Y++ PSLF+ II IYG+ANLPD+ALKTF+++L+F+ KP  K LN +L++LVS 
Sbjct: 117 RLKSEQ-YSINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNRLLQLLVSH 175

Query: 274 RNYVRPAFDLFKSAHRYDVSPNVESYNILMRAFCLNGDLSIAYNLFNQMPKRDIVPDVES 95
           RNY+RPAFDLFKSAHRY VSP+ +SYNILM AFC NGDLSIAY LFNQM KRD+ PDVES
Sbjct: 176 RNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVES 235

Query: 94  YRILMQGLCRRSQVNRAVDLLEDMLNKGFVP 2
           YRILMQGLCR+SQVNRAVDLLEDMLNKG+VP
Sbjct: 236 YRILMQGLCRKSQVNRAVDLLEDMLNKGYVP 266


>ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240852|gb|ABD32710.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355501623|gb|AES82826.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 451

 Score =  290 bits (743), Expect = 1e-76
 Identities = 146/226 (64%), Positives = 180/226 (79%)
 Frame = -2

Query: 679 FYSSPTLLLNHNQLPSPSRIQKLIASQSDPLVAKEIFDLASNASPGFSHSYATFQTLILK 500
           F+SS +   + + + SP+R+QKLIASQSDPL+AKEIFD AS   P F H+Y+T+  LILK
Sbjct: 29  FHSSSS---SSSPIGSPTRVQKLIASQSDPLLAKEIFDYAS-LQPNFRHNYSTYLILILK 84

Query: 499 LGRSRHFXXXXXXXXXXXSDRRYTVTPSLFTHIIRIYGDANLPDKALKTFYTILEFNIKP 320
            GRS+HF           S+    +TP+LF+++I+IYG+ANLPDKAL TFY +L+FNIKP
Sbjct: 85  FGRSKHFSLLDDLLRRLKSESSQPITPTLFSYLIKIYGEANLPDKALNTFYIMLQFNIKP 144

Query: 319 RTKQLNVILEILVSQRNYVRPAFDLFKSAHRYDVSPNVESYNILMRAFCLNGDLSIAYNL 140
            TK LN IL+ILVS RNY+RPAFDLFK AH++ V P+ +SYNILMRAFCLNGD+SIAY L
Sbjct: 145 LTKHLNRILDILVSHRNYLRPAFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTL 204

Query: 139 FNQMPKRDIVPDVESYRILMQGLCRRSQVNRAVDLLEDMLNKGFVP 2
           FN+M KRD+VPD++SYRILMQ LCR+SQVN AVDL EDMLNKGFVP
Sbjct: 205 FNKMFKRDVVPDIQSYRILMQALCRKSQVNGAVDLFEDMLNKGFVP 250



 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 33/121 (27%), Positives = 57/121 (47%)
 Frame = -2

Query: 364 ALKTFYTILEFNIKPRTKQLNVILEILVSQRNYVRPAFDLFKSAHRYDVSPNVESYNILM 185
           A+  F  +L     P +     +L  L  ++  +R A+ L         +P++  YN ++
Sbjct: 236 AVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKK-LREAYKLLCRMKVKGCNPDIVHYNTVI 294

Query: 184 RAFCLNGDLSIAYNLFNQMPKRDIVPDVESYRILMQGLCRRSQVNRAVDLLEDMLNKGFV 5
             FC  G    A  + + M     +P++ SYR L+ GLC    ++ A   +E+ML+KGF 
Sbjct: 295 LGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEMLSKGFS 354

Query: 4   P 2
           P
Sbjct: 355 P 355


>ref|XP_002320901.1| predicted protein [Populus trichocarpa] gi|222861674|gb|EEE99216.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score =  286 bits (733), Expect = 2e-75
 Identities = 144/211 (68%), Positives = 171/211 (81%)
 Frame = -2

Query: 634 SPSRIQKLIASQSDPLVAKEIFDLASNASPGFSHSYATFQTLILKLGRSRHFXXXXXXXX 455
           SPSR+QKLIASQSDPL+AKEIFD AS   P F HSY+++  LILKLGR+++F        
Sbjct: 66  SPSRVQKLIASQSDPLLAKEIFDYASR-QPNFQHSYSSYLILILKLGRAKYFSFIDDLLT 124

Query: 454 XXXSDRRYTVTPSLFTHIIRIYGDANLPDKALKTFYTILEFNIKPRTKQLNVILEILVSQ 275
                + Y VTP+LF++II IYG+ANLPDKALK FYTIL+F+  P  K LN ILEILVS 
Sbjct: 125 DLK-SKNYPVTPTLFSYIINIYGEANLPDKALKIFYTILKFDCNPSPKHLNGILEILVSH 183

Query: 274 RNYVRPAFDLFKSAHRYDVSPNVESYNILMRAFCLNGDLSIAYNLFNQMPKRDIVPDVES 95
           +NY++PAFDLFK AH YDV PN +SYNIL+RAFCLNG +S+AY+LFNQM KRD++PDVES
Sbjct: 184 QNYIKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVES 243

Query: 94  YRILMQGLCRRSQVNRAVDLLEDMLNKGFVP 2
           YRILMQ LCR+SQVN AVDLLEDMLNKG+VP
Sbjct: 244 YRILMQALCRKSQVNGAVDLLEDMLNKGYVP 274


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