BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00008136
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   254   2e-65
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,...   246   4e-63
ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arab...   246   6e-63
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]    242   7e-62
ref|XP_003535181.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   242   9e-62

>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 288

 Score =  254 bits (648), Expect = 2e-65
 Identities = 140/245 (57%), Positives = 174/245 (71%), Gaps = 4/245 (1%)
 Frame = +2

Query: 134 TTSHFIFPSSINPLP---KLFSIPTSSKLFEATPSSRFVRNLAVAXXXXXXXXXXXXXXX 304
           + S F  P S + L       S+  SS+ F  T SSRFVRN+AV+               
Sbjct: 25  SVSFFSLPFSCSSLKLHSNSISLSPSSRGF-LTLSSRFVRNVAVSSDYEQDEDVLSDEG- 82

Query: 305 XQQPNYSPDLKVYVGNLPWNVDSAALADLFQRAGNVEMVEVVYDKISGRSKGFGFVTMSS 484
             +P++SPDLK++VGNLP+NVDSA LA LF++AGNVEMVEV+YDKI+GRS+GFGFVTMS+
Sbjct: 83  --EPSFSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMST 140

Query: 485 IKEVEAATRQFNGYELEGRQLRVNSGPPPSRGE-SPFXXXXXXXXXXXXXXXXXXXXXXX 661
           ++EVEAA +QFNGYELEGRQLRVNSGPPP+R E S F                       
Sbjct: 141 VEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNFRGENSNFRGENTNFRGPRGGANL 200

Query: 662 DNTNKVYVGNLAWSVDNLALETLFREQGNVMEARVIYDRDSGRSKGFGFVTYSSADEVNS 841
           ++TN++YVGNL+W VD+LALETLF EQG V EARVIYDR++GRS+GFGFVTY+SA+EVN 
Sbjct: 201 NSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNR 260

Query: 842 AIQSL 856
           AI+SL
Sbjct: 261 AIESL 265



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 37/79 (46%), Positives = 49/79 (62%)
 Frame = +2

Query: 317 NYSPDLKVYVGNLPWNVDSAALADLFQRAGNVEMVEVVYDKISGRSKGFGFVTMSSIKEV 496
           N +   ++YVGNL W VD  AL  LF   G V    V+YD+ +GRS+GFGFVT +S +EV
Sbjct: 199 NLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEV 258

Query: 497 EAATRQFNGYELEGRQLRV 553
             A    +G +L GR +RV
Sbjct: 259 NRAIESLDGVDLNGRSIRV 277


>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
           Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
           29kD A ribonucleoprotein [Nicotiana sylvestris]
          Length = 273

 Score =  246 bits (629), Expect = 4e-63
 Identities = 135/244 (55%), Positives = 170/244 (69%), Gaps = 3/244 (1%)
 Frame = +2

Query: 134 TTSHFIF---PSSINPLPKLFSIPTSSKLFEATPSSRFVRNLAVAXXXXXXXXXXXXXXX 304
           TTS   F   PSS+N      S+ +SS  F    SSRFVR + ++               
Sbjct: 27  TTSLSFFSLPPSSLN-----LSLSSSSSCF----SSRFVRKVTLSDFDQIEDVEDGDDGV 77

Query: 305 XQQPNYSPDLKVYVGNLPWNVDSAALADLFQRAGNVEMVEVVYDKISGRSKGFGFVTMSS 484
            ++ N+SPDLK++VGNLP++ DSAALA+LF+RAGNVEMVEV+YDK++GRS+GFGFVTMSS
Sbjct: 78  EEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSS 137

Query: 485 IKEVEAATRQFNGYELEGRQLRVNSGPPPSRGESPFXXXXXXXXXXXXXXXXXXXXXXXD 664
            +EVEAA +QFNGYEL+GR LRVNSGPPP + E+                         D
Sbjct: 138 KEEVEAACQQFNGYELDGRALRVNSGPPPEKREN------------SSFRGGSRGGGSFD 185

Query: 665 NTNKVYVGNLAWSVDNLALETLFREQGNVMEARVIYDRDSGRSKGFGFVTYSSADEVNSA 844
           ++N+VYVGNLAW VD  ALETLF EQG V++A+V+YDRDSGRS+GFGFVTYSSA+EVN+A
Sbjct: 186 SSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNA 245

Query: 845 IQSL 856
           I+SL
Sbjct: 246 IESL 249



 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 43/83 (51%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
 Frame = +2

Query: 335 KVYVGNLPWNVDSAALADLFQRAGNVEMVEVVYDKISGRSKGFGFVTMSSIKEVEAATRQ 514
           +VYVGNL W VD  AL  LF   G V   +VVYD+ SGRS+GFGFVT SS +EV  A   
Sbjct: 189 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIES 248

Query: 515 FNGYELEGRQLRVN--SGPPPSR 577
            +G +L GR +RV+     PP R
Sbjct: 249 LDGVDLNGRAIRVSPAEARPPRR 271


>ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
           lyrata] gi|297327336|gb|EFH57756.1| hypothetical protein
           ARALYDRAFT_482714 [Arabidopsis lyrata subsp. lyrata]
          Length = 289

 Score =  246 bits (627), Expect = 6e-63
 Identities = 129/241 (53%), Positives = 161/241 (66%), Gaps = 7/241 (2%)
 Frame = +2

Query: 155 PSSINPLPKLFSIPTSSKLFEAT-------PSSRFVRNLAVAXXXXXXXXXXXXXXXXQQ 313
           P+S++ LP   S   +S     +       P+SRFVRN+A+                 QQ
Sbjct: 25  PASVSLLPPSLSFKLNSDSVSFSIAAKWNSPASRFVRNVAITSEFEVEEDGFADDAAPQQ 84

Query: 314 PNYSPDLKVYVGNLPWNVDSAALADLFQRAGNVEMVEVVYDKISGRSKGFGFVTMSSIKE 493
            ++S DLK++VGNLP+NVDSA LA LF+ AGNVEMVEV+YDK++GRS+GFGFVTMSS+ E
Sbjct: 85  QSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSVSE 144

Query: 494 VEAATRQFNGYELEGRQLRVNSGPPPSRGESPFXXXXXXXXXXXXXXXXXXXXXXXDNTN 673
           VEAA  QFNGYEL+GR LRVN+GPPP + E  F                        + N
Sbjct: 145 VEAAANQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGN 204

Query: 674 KVYVGNLAWSVDNLALETLFREQGNVMEARVIYDRDSGRSKGFGFVTYSSADEVNSAIQS 853
           +VYVGNL+W VD++ALE+LF EQG V+EARVIYDRDSGRSKGFGFVTY+S+ EV +AI S
Sbjct: 205 RVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVTYNSSQEVQNAINS 264

Query: 854 L 856
           L
Sbjct: 265 L 265



 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 44/83 (53%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
 Frame = +2

Query: 335 KVYVGNLPWNVDSAALADLFQRAGNVEMVEVVYDKISGRSKGFGFVTMSSIKEVEAATRQ 514
           +VYVGNL W VD  AL  LF   G V    V+YD+ SGRSKGFGFVT +S +EV+ A   
Sbjct: 205 RVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVTYNSSQEVQNAINS 264

Query: 515 FNGYELEGRQLRVNSGP--PPSR 577
            NG +L+GRQ+RV+     PP R
Sbjct: 265 LNGADLDGRQIRVSEAEARPPRR 287


>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
          Length = 289

 Score =  242 bits (618), Expect = 7e-62
 Identities = 122/212 (57%), Positives = 152/212 (71%)
 Frame = +2

Query: 221 TPSSRFVRNLAVAXXXXXXXXXXXXXXXXQQPNYSPDLKVYVGNLPWNVDSAALADLFQR 400
           +P+SRFVRN+A+                 ++ ++S DLK++VGNLP+NVDSA LA LF+ 
Sbjct: 54  SPASRFVRNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFES 113

Query: 401 AGNVEMVEVVYDKISGRSKGFGFVTMSSIKEVEAATRQFNGYELEGRQLRVNSGPPPSRG 580
           AGNVEMVEV+YDKI+GRS+GFGFVTMSS+ EVEAA +QFNGYEL+GR LRVN+GPPP + 
Sbjct: 114 AGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKR 173

Query: 581 ESPFXXXXXXXXXXXXXXXXXXXXXXXDNTNKVYVGNLAWSVDNLALETLFREQGNVMEA 760
           E  F                        + N+VYVGNL+W VD++ALE+LF EQG V+EA
Sbjct: 174 EDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEA 233

Query: 761 RVIYDRDSGRSKGFGFVTYSSADEVNSAIQSL 856
           RVIYDRDSGRSKGFGFVTY S+ EV +AI+SL
Sbjct: 234 RVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSL 265



 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 43/83 (51%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
 Frame = +2

Query: 335 KVYVGNLPWNVDSAALADLFQRAGNVEMVEVVYDKISGRSKGFGFVTMSSIKEVEAATRQ 514
           +VYVGNL W VD  AL  LF   G V    V+YD+ SGRSKGFGFVT  S +EV+ A + 
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264

Query: 515 FNGYELEGRQLRVNSGP--PPSR 577
            +G +L+GRQ+RV+     PP R
Sbjct: 265 LDGADLDGRQIRVSEAEARPPRR 287


>ref|XP_003535181.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
           max]
          Length = 275

 Score =  242 bits (617), Expect = 9e-62
 Identities = 132/237 (55%), Positives = 165/237 (69%), Gaps = 2/237 (0%)
 Frame = +2

Query: 152 FPSSINPLPKLFSIPTSSKLFEATP--SSRFVRNLAVAXXXXXXXXXXXXXXXXQQPNYS 325
           F SS++  P    I  S+   + T   SSRFV ++ V+                  P++S
Sbjct: 27  FSSSLSLTPNNKPISISAVFLKPTTLSSSRFVPHVVVSSDLGQEEDTFSDGDG---PSFS 83

Query: 326 PDLKVYVGNLPWNVDSAALADLFQRAGNVEMVEVVYDKISGRSKGFGFVTMSSIKEVEAA 505
           PDLK++VGNLP+NVDSA LA+LF+ AGNVE+VEV+YDK +GRS+GFGFVTMSS++E EAA
Sbjct: 84  PDLKLFVGNLPFNVDSAQLAELFESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAEAA 143

Query: 506 TRQFNGYELEGRQLRVNSGPPPSRGESPFXXXXXXXXXXXXXXXXXXXXXXXDNTNKVYV 685
            +QFNGYEL+GR LRVNSGPPP+R ES                         D+ N+V+V
Sbjct: 144 AQQFNGYELDGRALRVNSGPPPARNES-------APRFRGGSSFGSRGGGPSDSENRVHV 196

Query: 686 GNLAWSVDNLALETLFREQGNVMEARVIYDRDSGRSKGFGFVTYSSADEVNSAIQSL 856
            NLAW VDN+AL++LFREQGNV+EARVIYDR+SGRS+GFGFVT+SS DEVNSAIQSL
Sbjct: 197 SNLAWGVDNVALKSLFREQGNVLEARVIYDRESGRSRGFGFVTFSSPDEVNSAIQSL 253



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 39/74 (52%), Positives = 51/74 (68%)
 Frame = +2

Query: 335 KVYVGNLPWNVDSAALADLFQRAGNVEMVEVVYDKISGRSKGFGFVTMSSIKEVEAATRQ 514
           +V+V NL W VD+ AL  LF+  GNV    V+YD+ SGRS+GFGFVT SS  EV +A + 
Sbjct: 193 RVHVSNLAWGVDNVALKSLFREQGNVLEARVIYDRESGRSRGFGFVTFSSPDEVNSAIQS 252

Query: 515 FNGYELEGRQLRVN 556
            NG +L GR +RV+
Sbjct: 253 LNGVDLNGRAIRVS 266