BLASTX nr result

ID: Atractylodes21_contig00007486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007486
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330429.1| predicted protein [Populus trichocarpa] gi|2...   124   2e-26
ref|XP_002316927.1| predicted protein [Populus trichocarpa] gi|2...   117   2e-24
dbj|BAA74451.1| cytokinin-specific binding protein [Vigna radiata]    108   1e-21
pdb|2FLH|A Chain A, Crystal Structure Of Cytokinin-Specific Bind...   107   2e-21
ref|XP_003600179.1| Photosystem I P700 chlorophyll a apoprotein ...   107   2e-21

>ref|XP_002330429.1| predicted protein [Populus trichocarpa] gi|222871814|gb|EEF08945.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score =  124 bits (310), Expect = 2e-26
 Identities = 58/136 (42%), Positives = 86/136 (63%)
 Frame = +2

Query: 92  MKEDTAQVKVAVPITDLWKAMSTDIREIAPKILPDIVEVVELLEGDGGQGSVIVFKFCPT 271
           +KE   QV V V +  LWKA   D+++I PK++P++V+  ++LEGDGG  +V +F F P 
Sbjct: 2   IKEVKTQVNVGVEVDVLWKAFGKDLKDILPKMMPNLVKDADMLEGDGGLDTVYLFNFGPG 61

Query: 272 VLNSSYQKERIVEMDESVHRIALEILEGGHLDHGFTSYTTGFKLXXXXXXXXXXNVRVLY 451
           +   +YQKER+ E DE VHRI LE++EGGHL+HGF+ Y T F+L          +V + Y
Sbjct: 62  LKTMTYQKERVTEFDEFVHRIGLEVIEGGHLNHGFSHYKTTFQLTSTGEQETLIDVTISY 121

Query: 452 ETKAEHTHMPRETIKS 499
           E++ E   +P  +  S
Sbjct: 122 ESQVEEDTVPSNSASS 137


>ref|XP_002316927.1| predicted protein [Populus trichocarpa] gi|222859992|gb|EEE97539.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score =  117 bits (293), Expect = 2e-24
 Identities = 55/124 (44%), Positives = 83/124 (66%)
 Frame = +2

Query: 92  MKEDTAQVKVAVPITDLWKAMSTDIREIAPKILPDIVEVVELLEGDGGQGSVIVFKFCPT 271
           +KE   QV V V +  LWKA++ D+++I PK++P++V+  ++LEGDGG G++ +F F P 
Sbjct: 2   IKEVKTQVNVGVAVDVLWKALTKDLKDILPKMMPNLVKDADMLEGDGGLGTIYLFNFGPV 61

Query: 272 VLNSSYQKERIVEMDESVHRIALEILEGGHLDHGFTSYTTGFKLXXXXXXXXXXNVRVLY 451
               +YQKER+ E DESVHRI LE++EGGHLDHGF+ +   F+L          +V + Y
Sbjct: 62  ----TYQKERVSEFDESVHRIGLEVIEGGHLDHGFSHHKATFQLTSTGEQETLIDVTISY 117

Query: 452 ETKA 463
           E ++
Sbjct: 118 EEES 121


>dbj|BAA74451.1| cytokinin-specific binding protein [Vigna radiata]
          Length = 155

 Score =  108 bits (269), Expect = 1e-21
 Identities = 55/138 (39%), Positives = 84/138 (60%), Gaps = 2/138 (1%)
 Frame = +2

Query: 92  MKEDTAQVKVAVPITDLWKAMSTDIREIAPKILPDIVEVVELLEGDGGQGSVIVFKFCPT 271
           +KE   Q +++V +  LW  +S D   + PK+LP IV+ V+L+EGDGG G++++F F P 
Sbjct: 2   VKEFNTQTELSVRLEALWAVLSKDFITVVPKVLPHIVKDVQLIEGDGGVGTILIFNFLPE 61

Query: 272 VLNSSYQKERIVEMDESVHRIALEILEGGHLDHGFTSYTTGFKLXXXXXXXXXXNVRVLY 451
           V + SYQ+E I E DES H I L+++EGG+L+ G + Y T FKL          NV++ Y
Sbjct: 62  V-SPSYQREEITEFDESSHEIGLQVIEGGYLNQGLSYYKTTFKLSEIEEDKTLVNVKISY 120

Query: 452 --ETKAEHTHMPRETIKS 499
             ++  E    P +T +S
Sbjct: 121 DHDSDIEEKVTPTKTSQS 138


>pdb|2FLH|A Chain A, Crystal Structure Of Cytokinin-Specific Binding Protein
           From Mung Bean In Complex With Cytokinin
           gi|119389497|pdb|2FLH|B Chain B, Crystal Structure Of
           Cytokinin-Specific Binding Protein From Mung Bean In
           Complex With Cytokinin gi|119389498|pdb|2FLH|C Chain C,
           Crystal Structure Of Cytokinin-Specific Binding Protein
           From Mung Bean In Complex With Cytokinin
           gi|119389499|pdb|2FLH|D Chain D, Crystal Structure Of
           Cytokinin-Specific Binding Protein From Mung Bean In
           Complex With Cytokinin gi|188595961|pdb|3C0V|A Chain A,
           Crystal Structure Of Cytokinin-Specific Binding Protein
           In Complex With Cytokinin And Ta6br12
           gi|188595962|pdb|3C0V|B Chain B, Crystal Structure Of
           Cytokinin-Specific Binding Protein In Complex With
           Cytokinin And Ta6br12 gi|188595963|pdb|3C0V|C Chain C,
           Crystal Structure Of Cytokinin-Specific Binding Protein
           In Complex With Cytokinin And Ta6br12
           gi|188595964|pdb|3C0V|D Chain D, Crystal Structure Of
           Cytokinin-Specific Binding Protein In Complex With
           Cytokinin And Ta6br12
          Length = 155

 Score =  107 bits (268), Expect = 2e-21
 Identities = 55/138 (39%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
 Frame = +2

Query: 92  MKEDTAQVKVAVPITDLWKAMSTDIREIAPKILPDIVEVVELLEGDGGQGSVIVFKFCPT 271
           +KE   Q +++V +  LW  +S D   + PK+LP IV+ V+L+EGDGG G++++F F P 
Sbjct: 2   VKEFNTQTELSVRLEALWAVLSKDFITVVPKVLPHIVKDVQLIEGDGGVGTILIFNFLPE 61

Query: 272 VLNSSYQKERIVEMDESVHRIALEILEGGHLDHGFTSYTTGFKLXXXXXXXXXXNVRVLY 451
           V + SYQ+E I E DES H I L+++EGG+L  G + Y T FKL          NV++ Y
Sbjct: 62  V-SPSYQREEITEFDESSHEIGLQVIEGGYLSQGLSYYKTTFKLSEIEEDKTLVNVKISY 120

Query: 452 --ETKAEHTHMPRETIKS 499
             ++  E    P +T +S
Sbjct: 121 DHDSDIEEKVTPTKTSQS 138


>ref|XP_003600179.1| Photosystem I P700 chlorophyll a apoprotein [Medicago truncatula]
           gi|355489227|gb|AES70430.1| Photosystem I P700
           chlorophyll a apoprotein [Medicago truncatula]
          Length = 207

 Score =  107 bits (267), Expect = 2e-21
 Identities = 53/138 (38%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
 Frame = +2

Query: 95  KEDTAQVKVAVPITDLWKAMSTDIREIAPKILPDIVEVVELLEGDGGQGSVIVFKFCPTV 274
           KE   Q ++ V +  LW+A+S D+    PKI+P+IV+ V+++EG GG G++++  F   +
Sbjct: 3   KEFNQQAEICVELETLWQALSKDLIVTIPKIIPNIVKDVKVIEGSGGIGTILLLTFFSGL 62

Query: 275 LNSSYQKERIVEMDESVHRIALEILEGGHLDHGFTSYTTGFKLXXXXXXXXXXNVRVL-- 448
              SYQKE+I  +D+S H I L+++EGG+L+ GF+ Y T FKL          NV++   
Sbjct: 63  SPVSYQKEKITVLDDSSHEIGLQVVEGGYLNQGFSFYKTSFKLSTTEEDKTMVNVKISYD 122

Query: 449 YETKAEHTHMPRETIKSA 502
           YE + E +  P +T++SA
Sbjct: 123 YELEIEESEFPMKTLESA 140


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