BLASTX nr result

ID: Atractylodes21_contig00007482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007482
         (1497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263798.1| PREDICTED: KH domain-containing protein At1g...   417   e-114
ref|XP_002526434.1| nucleic acid binding protein, putative [Rici...   408   e-111
ref|XP_002331132.1| predicted protein [Populus trichocarpa] gi|1...   401   e-109
ref|XP_002328717.1| predicted protein [Populus trichocarpa] gi|2...   390   e-106
ref|XP_004133720.1| PREDICTED: KH domain-containing protein At1g...   378   e-102

>ref|XP_002263798.1| PREDICTED: KH domain-containing protein At1g09660 [Vitis vinifera]
            gi|297739511|emb|CBI29693.3| unnamed protein product
            [Vitis vinifera]
          Length = 295

 Score =  417 bits (1072), Expect = e-114
 Identities = 205/295 (69%), Positives = 242/295 (82%), Gaps = 1/295 (0%)
 Frame = +2

Query: 146  MENRIPPGSYFQYSPTGVHGSLQRSSS-PSDRERYLAELLAERQKLAPFMQVMPICSRLL 322
            M++R P GS+FQY P+G+H S  RSSS  SDRERYLAELLAE+QKL PFMQ++P CSRLL
Sbjct: 1    MDDRRPHGSFFQYPPSGLHASPHRSSSLSSDRERYLAELLAEKQKLGPFMQILPQCSRLL 60

Query: 323  NQEIMKTSGLVSNHNFVDHERMLRDRSYRSFGQKPNGGPMDVETWPSMQPEDNRRLQRMA 502
            NQEI + S +  N  FVD ER+  D  +RS GQ PNGGPMD+E WP+MQ E+N  L+RMA
Sbjct: 61   NQEIRRLSAIAPNQGFVDLERIEHDSPFRSLGQHPNGGPMDLEGWPAMQTEENGPLRRMA 120

Query: 503  SFQASAMGWPASPGMATPTVIKKVIRLDVPVEKFPNYNFVGRILGPRGNSLKRIEAMTEC 682
             FQAS++GW  +PG+ T  V+K+VIRLDVPV+K+PNYNFVGRILGPRGNSLKR+EAMTEC
Sbjct: 121  PFQASSLGWHRAPGIPTTPVVKRVIRLDVPVDKYPNYNFVGRILGPRGNSLKRVEAMTEC 180

Query: 683  RIYIRGRGSVKDSVKEEKLKDKPGYEHLNDPLHLLLEAEFPEDIIDSRLDHAVALLENLL 862
            R+YIRG+GSVKD+VKEEKLKDKPGYEHLN+PLH+L+EAEF EDII+SRL+ AVA+LENLL
Sbjct: 181  RVYIRGQGSVKDAVKEEKLKDKPGYEHLNEPLHVLVEAEFSEDIINSRLEQAVAILENLL 240

Query: 863  KPVDESMDTYKKHQLRELAMLNGTLREEXXXXXXXXXXXXXXFNSNGMKRAKTGK 1027
            KPVDES+D YKK QLRELAMLNGTLREE              FN+ GMKRAKTG+
Sbjct: 241  KPVDESLDQYKKQQLRELAMLNGTLREESPSMSPSMSPSMSPFNTAGMKRAKTGR 295


>ref|XP_002526434.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223534214|gb|EEF35929.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 295

 Score =  408 bits (1048), Expect = e-111
 Identities = 202/295 (68%), Positives = 235/295 (79%), Gaps = 2/295 (0%)
 Frame = +2

Query: 143  LMENRIPPGSYFQYSPTGVHGSLQR--SSSPSDRERYLAELLAERQKLAPFMQVMPICSR 316
            +M  RI PGS+FQY P+G H +     SS  SDRERYLAELLAERQKL PF+QV+P+CSR
Sbjct: 1    MMGERITPGSFFQYPPSGAHQASPHRPSSLSSDRERYLAELLAERQKLVPFIQVLPLCSR 60

Query: 317  LLNQEIMKTSGLVSNHNFVDHERMLRDRSYRSFGQKPNGGPMDVETWPSMQPEDNRRLQR 496
            LLNQEI + SG      FVDHER   +  YRS GQ+ NG PMD+E WP M  E+N  LQR
Sbjct: 61   LLNQEIRRVSGFTQG--FVDHERYEHESPYRSLGQQTNGRPMDLEAWPRMPTEENGHLQR 118

Query: 497  MASFQASAMGWPASPGMATPTVIKKVIRLDVPVEKFPNYNFVGRILGPRGNSLKRIEAMT 676
            MASFQA++MGWP  PG+ T  VIKKVIRLDVPV+ +P+YNFVGRILGPRGNSLKR+EAMT
Sbjct: 119  MASFQAASMGWPGVPGIPTTPVIKKVIRLDVPVDDYPSYNFVGRILGPRGNSLKRVEAMT 178

Query: 677  ECRIYIRGRGSVKDSVKEEKLKDKPGYEHLNDPLHLLLEAEFPEDIIDSRLDHAVALLEN 856
            ECR+YIRG+GSVKDSVKEEKLKDKPGYEHLN+PLH+L+EAEFPEDI+D+R++HAV +L++
Sbjct: 179  ECRVYIRGKGSVKDSVKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIVDARVEHAVTILQS 238

Query: 857  LLKPVDESMDTYKKHQLRELAMLNGTLREEXXXXXXXXXXXXXXFNSNGMKRAKT 1021
            LLKPVDES+D YKK QLRELAMLNGTLREE              FN+ GMKRAKT
Sbjct: 239  LLKPVDESLDHYKKQQLRELAMLNGTLREESPSMSPSMSPSMSPFNTAGMKRAKT 293


>ref|XP_002331132.1| predicted protein [Populus trichocarpa] gi|118487494|gb|ABK95574.1|
            unknown [Populus trichocarpa] gi|222872860|gb|EEF09991.1|
            predicted protein [Populus trichocarpa]
          Length = 294

 Score =  401 bits (1030), Expect = e-109
 Identities = 199/296 (67%), Positives = 236/296 (79%), Gaps = 2/296 (0%)
 Frame = +2

Query: 146  MENRIPPGSYFQYSPTGVHGSL-QRSSS-PSDRERYLAELLAERQKLAPFMQVMPICSRL 319
            M  RIP GSYFQY P+GVH +  QRSSS PSD ERYLAELLAE+ KL PF+QV+PIC RL
Sbjct: 1    MGERIPSGSYFQYPPSGVHHATPQRSSSLPSDLERYLAELLAEKHKLGPFVQVLPICCRL 60

Query: 320  LNQEIMKTSGLVSNHNFVDHERMLRDRSYRSFGQKPNGGPMDVETWPSMQPEDNRRLQRM 499
            L QEI + S    N  FVDHER   +  +RS GQ PNG PMD+E W +M  E+N  LQRM
Sbjct: 61   LYQEIRRASAY--NQGFVDHERYEHESPFRSLGQHPNGRPMDLEGWSAMPKEENGHLQRM 118

Query: 500  ASFQASAMGWPASPGMATPTVIKKVIRLDVPVEKFPNYNFVGRILGPRGNSLKRIEAMTE 679
            AS  A++MGWP  PG+++  V+K+VIRLDVPV+K+PNYNFVGRILGPRGNSLKR+EA+TE
Sbjct: 119  ASLPAASMGWPGVPGISSTPVVKRVIRLDVPVDKYPNYNFVGRILGPRGNSLKRVEALTE 178

Query: 680  CRIYIRGRGSVKDSVKEEKLKDKPGYEHLNDPLHLLLEAEFPEDIIDSRLDHAVALLENL 859
            CR+YIRG+GSVKDS+KEEKLKDKPGYEHLN+PLH+L+EAEFPEDI+++RLDHA+ +LE+L
Sbjct: 179  CRVYIRGKGSVKDSLKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIMNARLDHAITILESL 238

Query: 860  LKPVDESMDTYKKHQLRELAMLNGTLREEXXXXXXXXXXXXXXFNSNGMKRAKTGK 1027
            LKPVDES D YKK QLRELA+LNGTLREE              FN+ GMKRAKTG+
Sbjct: 239  LKPVDESFDNYKKQQLRELALLNGTLREESPSMSPSMSPSMSPFNTAGMKRAKTGR 294


>ref|XP_002328717.1| predicted protein [Populus trichocarpa] gi|222839015|gb|EEE77366.1|
            predicted protein [Populus trichocarpa]
          Length = 294

 Score =  390 bits (1003), Expect = e-106
 Identities = 194/296 (65%), Positives = 232/296 (78%), Gaps = 2/296 (0%)
 Frame = +2

Query: 146  MENRIPPGSYFQYSPTGVH-GSLQRSSS-PSDRERYLAELLAERQKLAPFMQVMPICSRL 319
            M  RIPPGSYFQY P+GVH  S  RS+S PSD ERYLAEL AE+ KL PF+QV+P C RL
Sbjct: 1    MGERIPPGSYFQYPPSGVHHASPHRSTSLPSDLERYLAELFAEKHKLGPFVQVLPNCCRL 60

Query: 320  LNQEIMKTSGLVSNHNFVDHERMLRDRSYRSFGQKPNGGPMDVETWPSMQPEDNRRLQRM 499
            LNQEI + S    N   VDHER   +  +RS GQ  NG  MD+E W +M  E+N  LQRM
Sbjct: 61   LNQEIRRASAC--NQGLVDHERYEHESPFRSLGQHSNGRTMDLEAWSAMPTEENGHLQRM 118

Query: 500  ASFQASAMGWPASPGMATPTVIKKVIRLDVPVEKFPNYNFVGRILGPRGNSLKRIEAMTE 679
            ASF A++MGWP  PG+    V+K+VIRLDVPV+K+P+YNFVGRILGPRGNSLKR+EA+T+
Sbjct: 119  ASFPAASMGWPGVPGIPITPVVKRVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVEALTD 178

Query: 680  CRIYIRGRGSVKDSVKEEKLKDKPGYEHLNDPLHLLLEAEFPEDIIDSRLDHAVALLENL 859
            CR+YIRG+GSVKDS+KEEKLKDKPGYEHLN+PLH+L+EAEFPEDII++RL+HA+ +LE+L
Sbjct: 179  CRVYIRGKGSVKDSLKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINARLEHAITILESL 238

Query: 860  LKPVDESMDTYKKHQLRELAMLNGTLREEXXXXXXXXXXXXXXFNSNGMKRAKTGK 1027
            LKPVDES+D YKK QLRELA+LNGTLREE              FN+ GMKRAKTG+
Sbjct: 239  LKPVDESLDHYKKQQLRELALLNGTLREESPSMSPSMSPSMSPFNTAGMKRAKTGR 294


>ref|XP_004133720.1| PREDICTED: KH domain-containing protein At1g09660-like [Cucumis
            sativus] gi|449478123|ref|XP_004155228.1| PREDICTED: KH
            domain-containing protein At1g09660-like [Cucumis
            sativus]
          Length = 289

 Score =  378 bits (971), Expect = e-102
 Identities = 189/295 (64%), Positives = 224/295 (75%), Gaps = 1/295 (0%)
 Frame = +2

Query: 146  MENRIPPGSYFQYSPTGVHGSLQRSSS-PSDRERYLAELLAERQKLAPFMQVMPICSRLL 322
            M  R PPGSYF Y P   H S  R+ S P DRER LAELL+ERQKL PF+QV+P CSRLL
Sbjct: 1    MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 323  NQEIMKTSGLVSNHNFVDHERMLRDRSYRSFGQKPNGGPMDVETWPSMQPEDNRRLQRMA 502
            NQEI + SGL  N   VDHER      YRS GQ  NG PMD+E WP MQ E +  +  M 
Sbjct: 61   NQEIRRLSGL--NQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMG 118

Query: 503  SFQASAMGWPASPGMATPTVIKKVIRLDVPVEKFPNYNFVGRILGPRGNSLKRIEAMTEC 682
              QA +MGWP   G+ T  ++K+V+RLDVPV+K+PNYNFVGR+LGPRGNSLKR+EA+TEC
Sbjct: 119  PLQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC 178

Query: 683  RIYIRGRGSVKDSVKEEKLKDKPGYEHLNDPLHLLLEAEFPEDIIDSRLDHAVALLENLL 862
            R+YIRG+GS+KD+++EEKLKDKPGYEHLN+PLHLL+EAEFPED I++RLDHAVA+LE+LL
Sbjct: 179  RVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLL 238

Query: 863  KPVDESMDTYKKHQLRELAMLNGTLREEXXXXXXXXXXXXXXFNSNGMKRAKTGK 1027
            KPVDE +D YKK QLRELA+LNGTLREE              FNS G+KRAKTG+
Sbjct: 239  KPVDELLDQYKKQQLRELALLNGTLREE----SPSMSPSMSPFNSTGLKRAKTGR 289