BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007304
         (1139 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsi...   116   4e-44
emb|CAN64225.1| hypothetical protein VITISV_016222 [Vitis vinifera]   112   2e-42
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...   118   7e-42
dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...   118   7e-42
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   101   9e-42

>gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
           gi|17065314|gb|AAL32811.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
           gi|21387147|gb|AAM47977.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 411

 Score =  116 bits (290), Expect(2) = 4e-44
 Identities = 52/136 (38%), Positives = 82/136 (60%)
 Frame = +2

Query: 44  DTNSPYYLHPSDYPRQMQVNDVLSDSNYGDWAQEMKNFLFAKNKIGFVNGSIKKPEEESA 223
           + ++P  LH SD+P    V  VL  SNY  W+  M+  L AKNK+GFV+GS+ +P  + +
Sbjct: 62  NVDNPLILHSSDHPGLSIVAHVLDGSNYNSWSIAMRISLDAKNKLGFVDGSLLRPSVDDS 121

Query: 224 QYMLWMRCDTMIKGWLTTAMEKDIRSSVKHANTPAEIWTDLEERFGKESAPRAYELKQTL 403
            + +W RC++M+K W+   + K+I  S+ +     E+WTDL  RF   + PR Y+L+Q +
Sbjct: 122 TFRIWSRCNSMVKSWILNVVNKEIYDSILYYEDAVEMWTDLFTRFRVNNLPRKYQLEQAV 181

Query: 404 TTTTQNGASVSAYYTK 451
            T  Q   ++S Y+TK
Sbjct: 182 MTLKQGSLNLSTYFTK 197



 Score = 89.7 bits (221), Expect(2) = 4e-44
 Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
 Frame = +3

Query: 525  RCTCDAGRRLNEAKEKERLYEFLMGLDNEFATIKTQILASKPTPTLGTTYHLVAEDEQQR 704
            +C CD  + L E  E  R+ +FLMGL+++F TI +QIL  KP P L   Y+++ +DE QR
Sbjct: 215  KCDCDQVKELLEDAETSRVIQFLMGLNDDFNTIMSQILNMKPRPGLNEIYNMLDQDESQR 274

Query: 705  AITAMRKPTHEAAAFRSFVQNRREGTNDSTPQRNKGGTKEARRNDNDKVENCTFCGRTGH 884
             +    KPT   AAF+         T     ++N           N K   CT C R GH
Sbjct: 275  LVGHASKPTPSPAAFQ---------TQGLLTEQN----PILMAQGNFKKPKCTHCNRIGH 321

Query: 885  NKDGCFKIIGYPEWWPGKGKKEKSRPKAAFANTETT--QVPIMTNE 1016
              D C+K+ GYP   P   ++          + + +  Q P+M +E
Sbjct: 322  TVDKCYKVHGYPPGHPRANQQSSCVGSTNLTSIDQSENQAPVMQDE 367


>emb|CAN64225.1| hypothetical protein VITISV_016222 [Vitis vinifera]
          Length = 987

 Score =  112 bits (279), Expect(2) = 2e-42
 Identities = 57/138 (41%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
 Frame = +2

Query: 44  DTNSPYYLHPSDYPRQMQVNDVL--SDSNYGDWAQEMKNFLFAKNKIGFVNGSIKKPEEE 217
           D +SPY+LH  D+P    V+  L  S SNY  W + M   L AKNK+GF++G+I +    
Sbjct: 17  DHSSPYFLHNGDHPSLSLVSLSLAGSGSNYHSWCRSMVTALNAKNKLGFIDGTISRLAAT 76

Query: 218 SAQYMLWMRCDTMIKGWLTTAMEKDIRSSVKHANTPAEIWTDLEERFGKESAPRAYELKQ 397
                LW RC++M+  WL+ ++ K+I  S+ +  T  EIW DL ERF + S PR +E+KQ
Sbjct: 77  DLLAGLWSRCNSMVISWLSNSVCKEIAESILYHETTIEIWNDLYERFHQGSGPRIFEIKQ 136

Query: 398 TLTTTTQNGASVSAYYTK 451
            +   TQ  A V+ YYT+
Sbjct: 137 KILAHTQGLAYVNTYYTR 154



 Score = 88.2 bits (217), Expect(2) = 2e-42
 Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
 Frame = +3

Query: 528  CTCDAGRRLNEAKEKERLYEFLMGLDNEFATIKTQILASKPTPTLGTTYHLVAEDEQQRA 707
            C C   R   E +++E + +FL+GL+  FA I+ QIL  KPTP L   + LV ++E+QR+
Sbjct: 171  CNCGGMRVYMEDQQRESVMQFLLGLNESFAPIRAQILLMKPTPPLNKVFSLVVQEERQRS 230

Query: 708  ITAMRKPTHEAAAFRSFVQNRREGTNDSTPQRNKGGTKEARRNDNDKVENCTFCGRTGHN 887
            +T    P     AF + V +R +  + ++   N   +++ R         CT C   GH 
Sbjct: 231  LTISNSP-----AFTAPVSSRFQAASRASSPTNSSRSRKDR-------PLCTHCNILGHT 278

Query: 888  KDGCFKIIGYPEWWPGKG--KKEKSRPKAAFAN-------------TETTQVPIMTNEQY 1022
             D C+KI GYP  +  +   K   SRP     N             T +   P +T++Q+
Sbjct: 279  VDRCYKIHGYPPGFRNRPNFKPNGSRPNQMLPNSLHTNQLTLXDGSTASASPPPLTHDQH 338

Query: 1023 QELL 1034
             +LL
Sbjct: 339  NQLL 342


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score =  118 bits (295), Expect(2) = 7e-42
 Identities = 56/147 (38%), Positives = 83/147 (56%)
 Frame = +2

Query: 8   ASSSSKNDGNTIDTNSPYYLHPSDYPRQMQVNDVLSDSNYGDWAQEMKNFLFAKNKIGFV 187
           AS    + G    T SP++LH +D+P    ++  L ++ YGDW+  M+  L AKNK+GFV
Sbjct: 49  ASRGVFSSGFDDPTQSPFFLHSADHPGLSIISHRLDETTYGDWSVAMRISLDAKNKLGFV 108

Query: 188 NGSIKKPEEESAQYMLWMRCDTMIKGWLTTAMEKDIRSSVKHANTPAEIWTDLEERFGKE 367
           +GS+ +P E    + LW RC++M+K WL  ++   I  S+   N   +IW DL +RF   
Sbjct: 109 DGSLPRPLESDPNFRLWSRCNSMVKSWLLNSVSPQIYRSILRLNDATDIWRDLFDRFNLT 168

Query: 368 SAPRAYELKQTLTTTTQNGASVSAYYT 448
           + PR Y L Q +    Q   S+S YYT
Sbjct: 169 NLPRTYNLTQEIQDLRQGTMSLSEYYT 195



 Score = 80.1 bits (196), Expect(2) = 7e-42
 Identities = 49/172 (28%), Positives = 75/172 (43%)
 Frame = +3

Query: 528  CTCDAGRRLNEAKEKERLYEFLMGLDNEFATIKTQILASKPTPTLGTTYHLVAEDEQQRA 707
            CTC    RL +  EK ++ +FL GL+  +A ++ QI+A K  P+L   YH++ +D  Q+ 
Sbjct: 214  CTCGKAVRLYQKAEKAKIMKFLAGLNESYAIVRRQIIAKKALPSLAEVYHILDQDNSQKG 273

Query: 708  ITAMRKPTHEAAAFRSFVQNRREGTNDSTPQRNKGGTKEARRNDNDKVENCTFCGRTGHN 887
               +  P    AAF+    +    T+        G  K            C+FC R GH 
Sbjct: 274  FFNVVAP---PAAFQVSEVSHSPITSPEIMYVQSGPNKGR--------PTCSFCNRVGHI 322

Query: 888  KDGCFKIIGYPEWWPGKGKKEKSRPKAAFANTETTQVPIMTNEQYQELLKHF 1043
             + C+K  G+P  +  KGK     PK      + T  P     Q + L  +F
Sbjct: 323  AERCYKKHGFPPGFTPKGKSSDKPPKPQAVAAQVTLSPDKMTGQLETLAGNF 374


>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score =  118 bits (296), Expect(2) = 7e-42
 Identities = 55/152 (36%), Positives = 88/152 (57%), Gaps = 4/152 (2%)
 Frame = +2

Query: 11  SSSSKNDGNT----IDTNSPYYLHPSDYPRQMQVNDVLSDSNYGDWAQEMKNFLFAKNKI 178
           SSS   D N+    +D N PYYL  SD P    +N     S+YG+W + +   L AKNK+
Sbjct: 17  SSSGSRDENSPLKVLDINHPYYLASSDAPGMNLINTSFDGSSYGNWKRGVLISLSAKNKL 76

Query: 179 GFVNGSIKKPEEESAQYMLWMRCDTMIKGWLTTAMEKDIRSSVKHANTPAEIWTDLEERF 358
           GF+ G+ KKP++E   +  W RC  M+  WL  ++ K+I  SV ++ T  E+W +LE+R+
Sbjct: 77  GFITGAYKKPDKEDLLFEQWRRCSDMVLAWLLNSLSKEIAESVLYSQTAQELWQELEQRY 136

Query: 359 GKESAPRAYELKQTLTTTTQNGASVSAYYTKM 454
           G+    + ++L++ L   +Q    V+AY+ K+
Sbjct: 137 GQIDGTKMFQLQRELNNVSQGTNDVAAYFNKL 168



 Score = 79.7 bits (195), Expect(2) = 7e-42
 Identities = 64/249 (25%), Positives = 105/249 (42%), Gaps = 40/249 (16%)
 Frame = +3

Query: 513  CTCGRCTCDAGRRLNEAKEKERLYEFLMGLDNEFATIKTQILASKPTPTLGTTYHLVAED 692
            C+C  C C+A     + +E ++L +FLMGL+  ++ I+  IL  KP P+    Y +++ +
Sbjct: 184  CSC-ECNCEAKGHNAKMQEDQQLIQFLMGLNEVYSGIRGNILMMKPLPSTAQAYSIISHE 242

Query: 693  EQQRAITAMRKPTHEAAAFRSFVQNRREGTND------STPQRNKGGTKEARRNDNDKVE 854
            E QR I A    + ++AAF +  QN     N+      +    N+    E RR+ N    
Sbjct: 243  ETQRGIAAGNNVSTDSAAFNASTQNWNNQRNNYDNRARNQNYNNRRNNYEGRRS-NQNNS 301

Query: 855  NCTFCGRTGHNKDGCFKIIGYPEWWPGKGKKEKSRPKAAF------------ANTETTQV 998
             CT+C  +GH ++ C K+ G             ++  AA+             NT    V
Sbjct: 302  YCTYCRTSGHVREECRKLNGRDNRNRRPAGNPNTQANAAYEGNTMQRNGNTPENTSAGSV 361

Query: 999  PI--MTNEQYQELLKHFKNAD--------KEGVGPVGNVAGKDVGN------------NS 1112
                 T EQ ++L++  ++A          E      N  GK   N            N 
Sbjct: 362  NAQGFTKEQCEQLIQMLQSAHSISSTASCSEVNNSAANFVGKYAANHTYTNCFSTLTTNF 421

Query: 1113 WIADTGATE 1139
            WI D+GA++
Sbjct: 422  WIIDSGASQ 430


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  101 bits (252), Expect(2) = 9e-42
 Identities = 48/134 (35%), Positives = 78/134 (58%)
 Frame = +2

Query: 53  SPYYLHPSDYPRQMQVNDVLSDSNYGDWAQEMKNFLFAKNKIGFVNGSIKKPEEESAQYM 232
           SPY L  SD P  M  + +L+  NY +W+ EM N L AK K GF+NGSI KP  ++  Y 
Sbjct: 25  SPYTLASSDNPGAMISSVMLTGDNYNEWSTEMLNALQAKRKTGFINGSISKPPLDNPDYE 84

Query: 233 LWMRCDTMIKGWLTTAMEKDIRSSVKHANTPAEIWTDLEERFGKESAPRAYELKQTLTTT 412
            W   ++MI GW+  ++E  ++S+V   +   ++W++L++RF   +  R +++K  L   
Sbjct: 85  NWQAVNSMIVGWIRASIEPKVKSTVTFISDAHQLWSELKQRFSVGNKVRVHQIKAQLAAC 144

Query: 413 TQNGASVSAYYTKM 454
            Q+G  V  YY ++
Sbjct: 145 RQDGQPVIDYYGRL 158



 Score = 96.3 bits (238), Expect(2) = 9e-42
 Identities = 67/236 (28%), Positives = 110/236 (46%), Gaps = 24/236 (10%)
 Frame = +3

Query: 501  PTPYCTCGRCTCDAGRRLNEAKEKERLYEFLMGLDNE-FATIKTQILASKPTPTLGTTYH 677
            P   C CG CTC A    ++ +E+E++++F++GLD+  F  +   ++A  P P+LG  Y 
Sbjct: 170  PITVCKCGLCTCGATLEPSKEREEEKIHQFVLGLDDSRFGGLSATLIAMDPFPSLGEIYS 229

Query: 678  LVAEDEQQRAITAMRKPTHEAAAFRSFVQNRREGTNDSTPQRNKGGTKEARRNDNDKVEN 857
             V  +EQ+ A   +R+    A  F   +  + E T D       G T  +     D+   
Sbjct: 230  RVVREEQRLASVQIREQQQSAIGF---LTRQSEVTAD-------GRTDSSIIKSRDRSVL 279

Query: 858  CTFCGRTGHNKDGCFKIIGYPEWWP----GKGKKEKSRPK------------------AA 971
            C+ CGR+GH K  C++I+G+P+WW     G G+   SR +                  AA
Sbjct: 280  CSHCGRSGHEKKDCWQIVGFPDWWTERTNGGGRGSSSRGRGGRSSGSNNSGRGRGQVTAA 339

Query: 972  FANTET-TQVPIMTNEQYQELLKHFKNADKEGVGPVGNVAGKDVGNNSWIADTGAT 1136
             A T   +  P  T +Q + + +  +N +    G    ++GK +     I DTGA+
Sbjct: 340  HATTSNLSSFPEFTPDQLRVITQMIQNKNN---GTSDKLSGK-MKLGDVILDTGAS 391