BLASTX nr result

ID: Atractylodes21_contig00007056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007056
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138734.1| PREDICTED: uncharacterized RNA-binding prote...    60   2e-07
gb|ADK63398.1| Ran-binding zinc finger protein [Brassica rapa]         60   2e-07
ref|NP_188189.1| Ran BP2/NZF zinc finger-like protein [Arabidops...    59   3e-07
ref|XP_002882957.1| zinc finger (Ran-binding) family protein [Ar...    59   3e-07
gb|AAM66130.1| putative zinc finger protein [Arabidopsis thaliana]     59   3e-07

>ref|XP_004138734.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c-like
           [Cucumis sativus] gi|449525766|ref|XP_004169887.1|
           PREDICTED: uncharacterized RNA-binding protein
           C17H9.04c-like [Cucumis sativus]
          Length = 155

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/40 (62%), Positives = 29/40 (72%)
 Frame = +3

Query: 9   QPGDWFCSVAICQAHNFASRHICFKCGAAKNAPSFGGNGG 128
           +PGDW+C+VA C AHNFASR ICFKCGA K+  S     G
Sbjct: 58  RPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDG 97


>gb|ADK63398.1| Ran-binding zinc finger protein [Brassica rapa]
          Length = 163

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 24/44 (54%), Positives = 29/44 (65%)
 Frame = +3

Query: 9   QPGDWFCSVAICQAHNFASRHICFKCGAAKNAPSFGGNGGFYHP 140
           +PGDW+C+V  C  HNFASR  CFKCG  K+  + GG GG   P
Sbjct: 61  RPGDWYCTVGSCGTHNFASRSTCFKCGTFKDESTGGGGGGVGGP 104


>ref|NP_188189.1| Ran BP2/NZF zinc finger-like protein [Arabidopsis thaliana]
           gi|11994340|dbj|BAB02299.1| zinc finger protein-like;
           Ser/Thr protein kinase-like protein [Arabidopsis
           thaliana] gi|89274153|gb|ABD65597.1| At3g15680
           [Arabidopsis thaliana] gi|332642192|gb|AEE75713.1| Ran
           BP2/NZF zinc finger-like protein [Arabidopsis thaliana]
          Length = 164

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 23/40 (57%), Positives = 27/40 (67%)
 Frame = +3

Query: 9   QPGDWFCSVAICQAHNFASRHICFKCGAAKNAPSFGGNGG 128
           +PGDW+C+V  C  HNFASR  CFKCG  K+    GG GG
Sbjct: 61  RPGDWYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGG 100


>ref|XP_002882957.1| zinc finger (Ran-binding) family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297328797|gb|EFH59216.1| zinc finger
           (Ran-binding) family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 164

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 23/40 (57%), Positives = 27/40 (67%)
 Frame = +3

Query: 9   QPGDWFCSVAICQAHNFASRHICFKCGAAKNAPSFGGNGG 128
           +PGDW+C+V  C  HNFASR  CFKCG  K+    GG GG
Sbjct: 61  RPGDWYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGG 100


>gb|AAM66130.1| putative zinc finger protein [Arabidopsis thaliana]
          Length = 164

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 23/40 (57%), Positives = 27/40 (67%)
 Frame = +3

Query: 9   QPGDWFCSVAICQAHNFASRHICFKCGAAKNAPSFGGNGG 128
           +PGDW+C+V  C  HNFASR  CFKCG  K+    GG GG
Sbjct: 61  RPGDWYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGG 100


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