BLASTX nr result

ID: Atractylodes21_contig00006321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006321
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532875.1| conserved hypothetical protein [Ricinus comm...   285   4e-75
ref|XP_002283731.1| PREDICTED: mediator of RNA polymerase II tra...   283   2e-74
gb|AFK42853.1| unknown [Medicago truncatula]                          279   3e-73
ref|NP_001241417.1| uncharacterized protein LOC100803031 [Glycin...   278   6e-73
ref|XP_003614099.1| Mediator of RNA polymerase II transcription ...   277   8e-73

>ref|XP_002532875.1| conserved hypothetical protein [Ricinus communis]
           gi|223527360|gb|EEF29504.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 217

 Score =  285 bits (729), Expect = 4e-75
 Identities = 145/172 (84%), Positives = 155/172 (90%)
 Frame = -3

Query: 569 GSEASEIRLLCDLEQPEPTWTVRHVGGSMRGAGADQISVLVRTMVESKVSKNVLRLFYLL 390
           G  ASE+RLLCDLEQPEPTWTV+HVGG+MRGAGA+QISVLVRTMVESK SKNVLRLFY L
Sbjct: 46  GIVASEVRLLCDLEQPEPTWTVKHVGGAMRGAGAEQISVLVRTMVESKASKNVLRLFYAL 105

Query: 389 GYKLDHELLRVGFSFHFQRGAQITVTVSSVNKMLKLHATDDAEAVTPGIQLVEVTAPASA 210
           GYKLDHELLRVGF+FHFQRGA+ITV VSSVNKMLKLHATD+A  VTPGIQLVEVTAPA+ 
Sbjct: 106 GYKLDHELLRVGFAFHFQRGARITVRVSSVNKMLKLHATDEAVPVTPGIQLVEVTAPATP 165

Query: 209 ENYNEVAAAVSSFCEYLAPLLHLSKPGVSTGVVPTXXXXXASLMSYGGATIM 54
           ENY+EV AAVSSFCEYLAPLLHLSKPGVSTGVVPT     ASLMS GG T +
Sbjct: 166 ENYSEVVAAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGTTL 217


>ref|XP_002283731.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
           [Vitis vinifera] gi|302142417|emb|CBI19620.3| unnamed
           protein product [Vitis vinifera]
          Length = 216

 Score =  283 bits (723), Expect = 2e-74
 Identities = 143/170 (84%), Positives = 154/170 (90%)
 Frame = -3

Query: 569 GSEASEIRLLCDLEQPEPTWTVRHVGGSMRGAGADQISVLVRTMVESKVSKNVLRLFYLL 390
           G  ASE+R+LCDLEQPEPTW VRH+GG+MRG+GA+QISVLVRTMVESKVSKNVLRLFY L
Sbjct: 46  GLVASEVRVLCDLEQPEPTWIVRHIGGAMRGSGAEQISVLVRTMVESKVSKNVLRLFYAL 105

Query: 389 GYKLDHELLRVGFSFHFQRGAQITVTVSSVNKMLKLHATDDAEAVTPGIQLVEVTAPASA 210
           GY+LDHELLRVGF+FHFQRGA ITVTVSSVNKMLKLHATD+A  VTPGIQLVEVTAPAS+
Sbjct: 106 GYRLDHELLRVGFAFHFQRGASITVTVSSVNKMLKLHATDEAVPVTPGIQLVEVTAPASS 165

Query: 209 ENYNEVAAAVSSFCEYLAPLLHLSKPGVSTGVVPTXXXXXASLMSYGGAT 60
           ENY+EVAAAVSSFCEYLAPLLHLSKPG STGVVPT     ASLMS  G T
Sbjct: 166 ENYSEVAAAVSSFCEYLAPLLHLSKPGTSTGVVPTAAAAAASLMSDAGVT 215


>gb|AFK42853.1| unknown [Medicago truncatula]
          Length = 217

 Score =  279 bits (713), Expect = 3e-73
 Identities = 144/170 (84%), Positives = 151/170 (88%)
 Frame = -3

Query: 569 GSEASEIRLLCDLEQPEPTWTVRHVGGSMRGAGADQISVLVRTMVESKVSKNVLRLFYLL 390
           G  +SE+RLLCDLEQ EP+WTVRHVGG+MRGAGADQISVLVRTMVESKVSKNVLR+FY L
Sbjct: 46  GPVSSEVRLLCDLEQTEPSWTVRHVGGAMRGAGADQISVLVRTMVESKVSKNVLRMFYTL 105

Query: 389 GYKLDHELLRVGFSFHFQRGAQITVTVSSVNKMLKLHATDDAEAVTPGIQLVEVTAPASA 210
           GYKLDHELLRVGFSF F RGAQITV VSSVNKMLKLHATD+A  VTPGIQ+VEVTAPAS 
Sbjct: 106 GYKLDHELLRVGFSFKFNRGAQITVRVSSVNKMLKLHATDEAVPVTPGIQMVEVTAPASD 165

Query: 209 ENYNEVAAAVSSFCEYLAPLLHLSKPGVSTGVVPTXXXXXASLMSYGGAT 60
           ENY EVAAAV SFCEYLAPLLHLSKPGVSTGVVPT     ASLMS GG T
Sbjct: 166 ENYAEVAAAVQSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGT 215


>ref|NP_001241417.1| uncharacterized protein LOC100803031 [Glycine max]
           gi|255638120|gb|ACU19374.1| unknown [Glycine max]
          Length = 217

 Score =  278 bits (710), Expect = 6e-73
 Identities = 139/172 (80%), Positives = 155/172 (90%)
 Frame = -3

Query: 569 GSEASEIRLLCDLEQPEPTWTVRHVGGSMRGAGADQISVLVRTMVESKVSKNVLRLFYLL 390
           G+ ASE+RLLCDLEQ EP+WTV+HVGG+MRGAGA+QISVLVR+MVESK SKN LR+FY L
Sbjct: 46  GTVASEVRLLCDLEQAEPSWTVKHVGGAMRGAGAEQISVLVRSMVESKTSKNALRMFYTL 105

Query: 389 GYKLDHELLRVGFSFHFQRGAQITVTVSSVNKMLKLHATDDAEAVTPGIQLVEVTAPASA 210
           GYKLDHELLRVGFSF+F RGAQITVTVSS+NKMLKLHATD+A  VTPGIQ+VEVTAPA+A
Sbjct: 106 GYKLDHELLRVGFSFNFHRGAQITVTVSSINKMLKLHATDEAVPVTPGIQMVEVTAPATA 165

Query: 209 ENYNEVAAAVSSFCEYLAPLLHLSKPGVSTGVVPTXXXXXASLMSYGGATIM 54
           E Y EVAAAVSSFCEYLAPLLHLSKPG+STGVVPT     ASLMS GG+T +
Sbjct: 166 ETYTEVAAAVSSFCEYLAPLLHLSKPGISTGVVPTAAAAAASLMSDGGSTTL 217


>ref|XP_003614099.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|355515434|gb|AES97057.1| Mediator of RNA
           polymerase II transcription subunit [Medicago
           truncatula]
          Length = 225

 Score =  277 bits (709), Expect = 8e-73
 Identities = 143/170 (84%), Positives = 151/170 (88%)
 Frame = -3

Query: 569 GSEASEIRLLCDLEQPEPTWTVRHVGGSMRGAGADQISVLVRTMVESKVSKNVLRLFYLL 390
           G  +SE+RLLCDLEQ EP+W VRHVGG+MRGAGADQISVLVRTMVESKVSKNVLR+FY L
Sbjct: 54  GPVSSEVRLLCDLEQTEPSWAVRHVGGAMRGAGADQISVLVRTMVESKVSKNVLRMFYTL 113

Query: 389 GYKLDHELLRVGFSFHFQRGAQITVTVSSVNKMLKLHATDDAEAVTPGIQLVEVTAPASA 210
           GYKLDHELLRVGFSF F+RGAQITV VSSVNKMLKLHATD+A  VTPGIQ+VEVTAPAS 
Sbjct: 114 GYKLDHELLRVGFSFKFKRGAQITVRVSSVNKMLKLHATDEAVPVTPGIQMVEVTAPASD 173

Query: 209 ENYNEVAAAVSSFCEYLAPLLHLSKPGVSTGVVPTXXXXXASLMSYGGAT 60
           ENY EVAAAV SFCEYLAPLLHLSKPGVSTGVVPT     ASLMS GG T
Sbjct: 174 ENYAEVAAAVQSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGT 223


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