BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006318
         (1673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   585   e-165
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...   536   e-150
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   495   e-137
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   488   e-135
ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thalian...   473   e-131

>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis vinifera]
            gi|296090438|emb|CBI40257.3| unnamed protein product
            [Vitis vinifera]
          Length = 476

 Score =  585 bits (1509), Expect = e-165
 Identities = 302/479 (63%), Positives = 363/479 (75%), Gaps = 5/479 (1%)
 Frame = +3

Query: 15   MAVLSHLRRALLRSPPVTTASGGARALSSSYRHVQAKNNSTAFTKVEDEKNENKKGKWLT 194
            MAV    RR  L+S   TT   G     S+    Q ++          E +++KKGKW T
Sbjct: 1    MAVAVLRRRFFLQSRRETTGKVGDMFCISALD--QQRSCFATSNDAVSEAHKSKKGKWFT 58

Query: 195  LPPFYMTVNGASLGRDIVGRRKSTGEGEAS---TTTALKWVMRCCPQLPRSLVQKLFRLR 365
            LP F   V+ +SLG+ + G R     G  +   +TTALKWV+RCCPQLPRSLVQKLFRLR
Sbjct: 59   LPAFTPVVDASSLGKVLSGHRTDLNTGNTTAGASTTALKWVVRCCPQLPRSLVQKLFRLR 118

Query: 366  QVRRETSEGSNIDQDVQAPGCRVKRVSAKDSMKFGDTIYLPITVQALATEKVECLCSEEE 545
            QVRRE+      D  VQ    R+KRV+AKD M  GD I LPITV+   +EK E  C++EE
Sbjct: 119  QVRRESYNMITSDIGVQNQEHRLKRVAAKDLMNLGDQILLPITVEEFPSEKHEYHCNDEE 178

Query: 546  LTFLHDLELYKDSAILVINKPPGMAVQGGIGIKRSLDELAGTYLRHDFSEPPRLVHRLDR 725
            + F+H+LELYKD AI+V+NKPPG+ VQGGIGIKRSLDELA TYLR+D SEPPRLVHRLDR
Sbjct: 179  INFVHNLELYKDPAIIVVNKPPGLPVQGGIGIKRSLDELAATYLRYDCSEPPRLVHRLDR 238

Query: 726  DSSGILVLGRTQLSATVLHSVFREKTVGAFNIDLKSEKRFLQRKYWALVLGSPRRSQGLI 905
            DSSGIL++GRTQ SAT+LHS+FREKT GA N D+ ++KR LQR+YWALV+GSPRR +GLI
Sbjct: 239  DSSGILIMGRTQTSATILHSIFREKTFGASNNDIDTKKRILQRRYWALVIGSPRRPRGLI 298

Query: 906  SVPLGKVVMDDGRSERITIVENVSTTPSQHAITEYRVLDSSNHGLTWLELSPLTGRKHQI 1085
            S PLGKVV+DDG+SERITIV+NV T  SQHAITEYRV+ SS HG TWLELSPLTGRKHQ+
Sbjct: 299  SAPLGKVVVDDGKSERITIVDNVQTMSSQHAITEYRVIKSSCHGYTWLELSPLTGRKHQL 358

Query: 1086 RVHCAEVLGTPIVGDYKYGWQAHKKWNQLFSSNLEEKVE--ACKRKSLPFGLDLANGSIS 1259
            RVHCAEVLGTPIVGDYKYGWQAH+KW QLF SN+E+ ++     RK+ PFGLDL +GSI 
Sbjct: 359  RVHCAEVLGTPIVGDYKYGWQAHRKWKQLFQSNIEKNLDENLSNRKTHPFGLDLESGSIL 418

Query: 1260 DKQPNLHLHCKKMVLPDVSSALKRAHISSSDYDFGDIDSLKFAAPLPPHMQRSWDILCS 1436
            DKQP+LHLHCK+MVLP+VS AL+   + S++ D  +++SL+F APLP HMQRSWDIL S
Sbjct: 419  DKQPHLHLHCKQMVLPNVSLALQNLQL-SAECDLSELESLEFVAPLPSHMQRSWDILNS 476


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 536

 Score =  536 bits (1382), Expect = e-150
 Identities = 273/435 (62%), Positives = 334/435 (76%), Gaps = 4/435 (0%)
 Frame = +3

Query: 144  TKVEDEKNENKK-GKWLTLPPFYMTVNGASLGRDIVGRRKSTGEGEAST-TTALKWVMRC 317
            TK +  KN  K  GK+ TLPP+  T++G++LG+ +     +T   +AST TTALKWV+RC
Sbjct: 113  TKDQTSKNNTKNTGKFFTLPPYTSTISGSALGKAL----SATATAKASTETTALKWVLRC 168

Query: 318  CPQLPRSLVQKLFRLRQVRRETSEGSNIDQDVQAPGCRVKRVSAKDSMKFGDTIYLPITV 497
            CP+LPR+LVQKLFRLRQV+RE     + + +      + KRV+AKD M  GD I+LPI+V
Sbjct: 169  CPELPRNLVQKLFRLRQVKRELLNVGDGEMEH-----KTKRVAAKDLMNVGDRIFLPISV 223

Query: 498  QALATEKVECLCSEEELTFLHDLELYKDSAILVINKPPGMAVQGGIGIKRSLDELAGTYL 677
            QAL  EK +C C E+E  F+  LELYKD AI+V+NKPPGM VQGGIGIK S DELA + L
Sbjct: 224  QALPFEKQKCHCGEKEANFIRGLELYKDEAIIVVNKPPGMPVQGGIGIKSSFDELAASCL 283

Query: 678  RHDFSEPPRLVHRLDRDSSGILVLGRTQLSATVLHSVFREKTVGAFNIDLKSEKRFLQRK 857
             +D+SEPPRLVHRLDRDSSGILV+GRTQ S  VLHSVFREKT  A N D+   +R LQRK
Sbjct: 284  SYDYSEPPRLVHRLDRDSSGILVMGRTQTSTMVLHSVFREKTFAASNHDIGERRRILQRK 343

Query: 858  YWALVLGSPRRSQGLISVPLGKVVMDDGRSERITIVENVSTTPSQHAITEYRVLDSSNHG 1037
            YWALV+GSPRR +G+IS PLGKVV+DDG+S+RIT+VEN  +T  QHA+T+YRV++SS HG
Sbjct: 344  YWALVIGSPRRQKGIISAPLGKVVVDDGKSDRITVVENAESTSFQHAVTQYRVMESS-HG 402

Query: 1038 LTWLELSPLTGRKHQIRVHCAEVLGTPIVGDYKYGWQAHKKWNQLFSSNLEE--KVEACK 1211
              WLELSP+TGRKHQ+RVHCAEVLGTPIVGDYKYGWQ H+KW QL   NLE+     A  
Sbjct: 403  YAWLELSPITGRKHQLRVHCAEVLGTPIVGDYKYGWQVHRKWKQLPFPNLEKISNENALC 462

Query: 1212 RKSLPFGLDLANGSISDKQPNLHLHCKKMVLPDVSSALKRAHISSSDYDFGDIDSLKFAA 1391
            +K LPFG+DL +GSIS+K P LHLHCK+MVLPDVS AL+    +SS+YDF D+ S++  A
Sbjct: 463  KKILPFGIDLESGSISEKHPRLHLHCKQMVLPDVSQALRGVQ-TSSNYDFSDLKSIELDA 521

Query: 1392 PLPPHMQRSWDILCS 1436
            PLP +MQRSWDIL S
Sbjct: 522  PLPSYMQRSWDILNS 536


>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
            sativus]
          Length = 471

 Score =  495 bits (1274), Expect = e-137
 Identities = 261/466 (56%), Positives = 330/466 (70%), Gaps = 4/466 (0%)
 Frame = +3

Query: 45   LLRSPPVTTASGGARALSSSYRHVQAKNNSTAFTKVEDEKNENKKGKWLTLPPFYMTVNG 224
            L  SP  T  SG     S  +        S A   V  +KNE    +W TLPP+  TVNG
Sbjct: 13   LRTSPSCTDPSGEILYFSIFHVLKSTLALSNASEPVSQQKNEKGSNRWFTLPPYTATVNG 72

Query: 225  ASLGRDIV--GRRKSTGEGEASTTTALKWVMRCCPQLPRSLVQKLFRLRQVRRETSEGSN 398
            + LG  I+  G +   G   A+ T ALKWV+RCCP+LPRSLVQKLFRLR+VRR +S   N
Sbjct: 73   SILGNRIMNGGGQAELGASTAAIT-ALKWVIRCCPELPRSLVQKLFRLRKVRRGSSMIEN 131

Query: 399  IDQDVQAPGCRVKRVSAKDSMKFGDTIYLPITVQALATEKVECLCSEEELTFLHDLELYK 578
             + +++A   ++KRV+AKD +  GD I+LP++VQ  +TEK    C++EE TF+H L L+K
Sbjct: 132  SEYNLEARD-QLKRVAAKDILNVGDQIFLPMSVQVFSTEKTRDYCNKEEETFMHSLVLHK 190

Query: 579  DSAILVINKPPGMAVQGGIGIKRSLDELAGTYLRHDFSEPPRLVHRLDRDSSGILVLGRT 758
            D AILVINKPPG+ VQGGIG+KRSLDELA + L + +SEPPRLVHRLDRDSSGIL++GRT
Sbjct: 191  DPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYGYSEPPRLVHRLDRDSSGILIMGRT 250

Query: 759  QLSATVLHSVFREKTVGAFN--IDLKSEKRFLQRKYWALVLGSPRRSQGLISVPLGKVVM 932
              S ++LHSVFREKT  A      + SEK+ L ++YWALV+GSPRRS+GLI+ PLGK+V+
Sbjct: 251  STSTSLLHSVFREKTFEASKHANHVDSEKKILLKRYWALVIGSPRRSKGLITAPLGKIVL 310

Query: 933  DDGRSERITIVENVSTTPSQHAITEYRVLDSSNHGLTWLELSPLTGRKHQIRVHCAEVLG 1112
            DDGRSE+I +++N    P Q AIT+Y+V+  S+HG TWLEL PLTGRKHQ+RVHCAEVLG
Sbjct: 311  DDGRSEQIMVIDNAEPMPFQQAITQYKVI-KSHHGYTWLELCPLTGRKHQLRVHCAEVLG 369

Query: 1113 TPIVGDYKYGWQAHKKWNQLFSSNLEEKVEACKRKSLPFGLDLANGSISDKQPNLHLHCK 1292
            TPIVGDYKYGWQAHK W   F SN  +     K++ LPFGLD  +GSI++  P LHLHCK
Sbjct: 370  TPIVGDYKYGWQAHKNWKP-FCSNFHK--NQGKKQFLPFGLDFESGSIAENSPRLHLHCK 426

Query: 1293 KMVLPDVSSALKRAHISSSDYDFGDIDSLKFAAPLPPHMQRSWDIL 1430
            ++ LPDVS AL   H  S D D   ++ L+  APLP +MQ+SWDI+
Sbjct: 427  QLTLPDVSFAL---HNDSLDRDCSRLECLELDAPLPSYMQKSWDII 469


>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
            sativus]
          Length = 466

 Score =  488 bits (1257), Expect = e-135
 Identities = 259/468 (55%), Positives = 325/468 (69%), Gaps = 4/468 (0%)
 Frame = +3

Query: 45   LLRSPPVTTASGGARALSSSYRHVQAKNNSTAFTKVEDEKNENKKGKWLTLPPFYMTVNG 224
            L  SP  T  SG     S  +        S A   V  +KNE    +W TLPP+  TVNG
Sbjct: 13   LRTSPSCTDPSGEILYFSIFHVLKSTLALSNASEPVSQQKNEKGSNRWFTLPPYTATVNG 72

Query: 225  ASLGRDIV--GRRKSTGEGEASTTTALKWVMRCCPQLPRSLVQKLFRLRQVRRETSEGSN 398
            + LG  I+  G +   G   A+ T ALKWV+RCCP+LPRSLVQKLFRLR+V R+ + G  
Sbjct: 73   SILGNRIMNGGGQAELGASTAAIT-ALKWVIRCCPELPRSLVQKLFRLRKVPRQLNVGCG 131

Query: 399  IDQDVQAPGCRVKRVSAKDSMKFGDTIYLPITVQALATEKVECLCSEEELTFLHDLELYK 578
                      ++KRV+AKD +  GD I+LP++VQ  +TEK    C++EE TF+H L L+K
Sbjct: 132  NSHH------QLKRVAAKDILNVGDQIFLPMSVQVFSTEKTRDYCNKEEETFMHSLVLHK 185

Query: 579  DSAILVINKPPGMAVQGGIGIKRSLDELAGTYLRHDFSEPPRLVHRLDRDSSGILVLGRT 758
            D AILVINKPPG+ VQGGIG+KRSLDELA + L + +SEPPRLVHRLDRDSSGIL++GRT
Sbjct: 186  DPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYGYSEPPRLVHRLDRDSSGILIMGRT 245

Query: 759  QLSATVLHSVFREKTVGAFN--IDLKSEKRFLQRKYWALVLGSPRRSQGLISVPLGKVVM 932
              S ++LHSVFREKT  A      + SEK+ L ++YWALV+GSPRRS+GLI+ PLGK+V+
Sbjct: 246  STSTSLLHSVFREKTFEASKHANHVDSEKKILLKRYWALVIGSPRRSKGLITAPLGKIVL 305

Query: 933  DDGRSERITIVENVSTTPSQHAITEYRVLDSSNHGLTWLELSPLTGRKHQIRVHCAEVLG 1112
            DDGRSE+I +++N    P Q AIT+Y+V+  S+HG TWLEL PLTGRKHQ+RVHCAEVLG
Sbjct: 306  DDGRSEQIMVIDNAEPMPFQQAITQYKVI-KSHHGYTWLELCPLTGRKHQLRVHCAEVLG 364

Query: 1113 TPIVGDYKYGWQAHKKWNQLFSSNLEEKVEACKRKSLPFGLDLANGSISDKQPNLHLHCK 1292
            TPIVGDYKYGWQAHK W   F SN  +     K++ LPFGLD  +GSI++  P LHLHCK
Sbjct: 365  TPIVGDYKYGWQAHKNWKP-FCSNFHK--NQGKKQFLPFGLDFESGSIAENNPRLHLHCK 421

Query: 1293 KMVLPDVSSALKRAHISSSDYDFGDIDSLKFAAPLPPHMQRSWDILCS 1436
            ++ LPDVS AL   H  S D D   ++ L+  APLP +MQ+SWDI+ S
Sbjct: 422  QLTLPDVSFAL---HNDSLDRDCSRLECLELDAPLPSYMQKSWDIINS 466


>ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thaliana]
            gi|75274073|sp|Q9LT72.1|PUS4_ARATH RecName: Full=RNA
            pseudourine synthase 4, mitochondrial; AltName: Full=RNA
            pseudouridylate synthase 4; AltName: Full=RNA-uridine
            isomerase 4; Flags: Precursor gi|11994467|dbj|BAB02469.1|
            unnamed protein product [Arabidopsis thaliana]
            gi|110737723|dbj|BAF00800.1| hypothetical protein
            [Arabidopsis thaliana] gi|134031916|gb|ABO45695.1|
            At3g19440 [Arabidopsis thaliana]
            gi|332642719|gb|AEE76240.1| RNA pseudourine synthase 4
            [Arabidopsis thaliana]
          Length = 477

 Score =  473 bits (1216), Expect = e-131
 Identities = 259/475 (54%), Positives = 331/475 (69%), Gaps = 7/475 (1%)
 Frame = +3

Query: 33   LRRALLRSPP-VTTASGGARALSSSYRHVQAKNNSTAFTKVEDEKNENKKGKWLTLPPFY 209
            LRR L  S P ++T     +ALS++  H   ++ ST  T       ++ +GKWLTLPPF 
Sbjct: 11   LRRQLQSSSPTISTFKNPTKALSAA-AHQSTRSYSTTQT-------DDSRGKWLTLPPFS 62

Query: 210  MTVNGASLGRDIVGRRKSTGEG-EASTTTALKWVMRCCPQLPRSLVQKLFRLRQVRRETS 386
             T++G ++G+D++    S     + S TTAL+W++RC P LPR+LVQKLFRLRQVRRE S
Sbjct: 63   PTIDGTAVGKDLLSDGDSVKSSTDNSKTTALRWILRCRPDLPRTLVQKLFRLRQVRREMS 122

Query: 387  EGSNIDQDVQAPGCRVKRVSAKDSMKFGDTIYLPITV-----QALATEKVECLCSEEELT 551
               ++D D +    ++KRV+AK+S+  GD IYLP++V     Q    +K    CS+EE  
Sbjct: 123  --MSVDGD-ELQRSQLKRVAAKESLNVGDRIYLPLSVDNDTPQTPPAKKESFQCSDEERK 179

Query: 552  FLHDLELYKDSAILVINKPPGMAVQGGIGIKRSLDELAGTYLRHDFSEPPRLVHRLDRDS 731
            F+  L LYKD AI+V+NKP G+AVQGG GIK S+DELA + L+ D SE PRLVHRLDRD 
Sbjct: 180  FVCSLVLYKDPAIIVLNKPHGLAVQGGSGIKTSIDELAASCLKFDKSESPRLVHRLDRDC 239

Query: 732  SGILVLGRTQLSATVLHSVFREKTVGAFNIDLKSEKRFLQRKYWALVLGSPRRSQGLISV 911
            SG+LVL RTQ +ATVLHS+FREKT GA    +K   + L+RKY ALV+G P R +G IS 
Sbjct: 240  SGLLVLARTQTAATVLHSIFREKTTGASAYGVKKNVKSLKRKYMALVIGCPPRQRGQISA 299

Query: 912  PLGKVVMDDGRSERITIVENVSTTPSQHAITEYRVLDSSNHGLTWLELSPLTGRKHQIRV 1091
            PL KVV+DDG+SERIT+ +N     +QHAITEYRV++SS HG TWLEL PLTGRKHQ+RV
Sbjct: 300  PLRKVVVDDGKSERITVNDNGELVSTQHAITEYRVIESSPHGYTWLELRPLTGRKHQLRV 359

Query: 1092 HCAEVLGTPIVGDYKYGWQAHKKWNQLFSSNLEEKVEACKRKSLPFGLDLANGSISDKQP 1271
            HCAEVLGTPIVGDYKYGWQAHK      SS    +    K+ S PFGLDL  G +S KQP
Sbjct: 360  HCAEVLGTPIVGDYKYGWQAHKAREPFVSS----ENNPTKQSSSPFGLDLDGGDVSSKQP 415

Query: 1272 NLHLHCKKMVLPDVSSALKRAHISSSDYDFGDIDSLKFAAPLPPHMQRSWDILCS 1436
            +LHLH K++ LP++S  L++  + SSD D  D+DSLKF APLP HMQ S+++L S
Sbjct: 416  HLHLHSKQIDLPNISQLLEKMQV-SSDSDISDLDSLKFDAPLPSHMQLSFNLLKS 469