BLASTX nr result

ID: Atractylodes21_contig00006306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006306
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283025.1| PREDICTED: 60S acidic ribosomal protein P2B ...    99   6e-19
gb|ABK93470.1| unknown [Populus trichocarpa]                           99   1e-18
ref|XP_002328062.1| predicted protein [Populus trichocarpa] gi|1...    99   1e-18
ref|XP_002313663.1| predicted protein [Populus trichocarpa] gi|1...    96   5e-18
gb|AGE46033.1| 60S acidic ribosomal protein P2B [Elaeis guineensis]    95   1e-17

>ref|XP_002283025.1| PREDICTED: 60S acidic ribosomal protein P2B [Vitis vinifera]
           gi|297740089|emb|CBI30271.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score = 99.4 bits (246), Expect = 6e-19
 Identities = 60/114 (52%), Positives = 65/114 (57%)
 Frame = -2

Query: 592 MKVVXXXXXXXLGGNTCPSADDLKNILGSVGADADEARIELLLSEVKGKDITELIASGRE 413
           MKV+       LGGNTCPSA+DLK+ILGSVGA+AD+ RIELLLSEVKGKDITELIASGRE
Sbjct: 1   MKVIAAYLLAVLGGNTCPSANDLKDILGSVGAEADDDRIELLLSEVKGKDITELIASGRE 60

Query: 412 KLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 251
           KL                                         SDDDMGFSLFD
Sbjct: 61  KLASVPSGGGVAVAATAVGGASGGGAPAAPEPKKEEKVEEKEESDDDMGFSLFD 114


>gb|ABK93470.1| unknown [Populus trichocarpa]
          Length = 114

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 60/114 (52%), Positives = 64/114 (56%)
 Frame = -2

Query: 592 MKVVXXXXXXXLGGNTCPSADDLKNILGSVGADADEARIELLLSEVKGKDITELIASGRE 413
           MKVV       LGGNTCP+A+DLK+ILGSVGADAD+ RIELLLS VKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTCPTAEDLKHILGSVGADADDDRIELLLSSVKGKDITELIASGRE 60

Query: 412 KLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 251
           KL                                         SDDDMGFSLFD
Sbjct: 61  KLASVPSGGGVAVASGGAPAAASGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 114


>ref|XP_002328062.1| predicted protein [Populus trichocarpa] gi|118481307|gb|ABK92597.1|
           unknown [Populus trichocarpa]
           gi|118485702|gb|ABK94701.1| unknown [Populus
           trichocarpa] gi|222837577|gb|EEE75942.1| predicted
           protein [Populus trichocarpa]
          Length = 114

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 60/114 (52%), Positives = 64/114 (56%)
 Frame = -2

Query: 592 MKVVXXXXXXXLGGNTCPSADDLKNILGSVGADADEARIELLLSEVKGKDITELIASGRE 413
           MKVV       LGGNTCP+A+DLK+ILGSVGADAD+ RIELLLS VKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTCPTAEDLKHILGSVGADADDDRIELLLSSVKGKDITELIASGRE 60

Query: 412 KLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 251
           KL                                         SDDDMGFSLFD
Sbjct: 61  KLASVPSGGGVAVAAGGAPAAASGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 114


>ref|XP_002313663.1| predicted protein [Populus trichocarpa] gi|118484510|gb|ABK94130.1|
           unknown [Populus trichocarpa]
           gi|118485202|gb|ABK94462.1| unknown [Populus
           trichocarpa] gi|118487376|gb|ABK95516.1| unknown
           [Populus trichocarpa] gi|118488119|gb|ABK95879.1|
           unknown [Populus trichocarpa]
           gi|222850071|gb|EEE87618.1| predicted protein [Populus
           trichocarpa]
          Length = 113

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 61/114 (53%), Positives = 64/114 (56%)
 Frame = -2

Query: 592 MKVVXXXXXXXLGGNTCPSADDLKNILGSVGADADEARIELLLSEVKGKDITELIASGRE 413
           MKVV       LGGNTCP+A+DLKNILGSVGADAD+ RIELLLS VKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTCPTAEDLKNILGSVGADADDDRIELLLSSVKGKDITELIASGRE 60

Query: 412 KLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 251
           KL                                         SDDDMGFSLFD
Sbjct: 61  KL-ASVPSGGGVAVSAGAAPAAAGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 113


>gb|AGE46033.1| 60S acidic ribosomal protein P2B [Elaeis guineensis]
          Length = 112

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 50/61 (81%), Positives = 53/61 (86%)
 Frame = -2

Query: 592 MKVVXXXXXXXLGGNTCPSADDLKNILGSVGADADEARIELLLSEVKGKDITELIASGRE 413
           MKVV       LGGNTCPSADDLK+ILGSVGA+AD+ RIELLLSEVKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTCPSADDLKDILGSVGAEADDDRIELLLSEVKGKDITELIASGRE 60

Query: 412 K 410
           K
Sbjct: 61  K 61


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