BLASTX nr result

ID: Atractylodes21_contig00006237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006237
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty...    66   3e-09
gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymera...    66   3e-09
emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera]    64   2e-08
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]    64   2e-08
emb|CAN70327.1| hypothetical protein VITISV_041473 [Vitis vinifera]    63   2e-08

>gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
            aspartic, catalytic [Medicago truncatula]
          Length = 1715

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
 Frame = +1

Query: 1    NNKEQLGKFSPKADEGIFVGYSLISTAFRIYNCRRKIIEESVHVKFDEKIKIDRQLSTEQ 180
            N K+ L KF  KA  GIF+GYS  S A+R+YN   + +EES+HVKFD++       S   
Sbjct: 1038 NTKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCVEESMHVKFDDR----EPGSKTS 1093

Query: 181  ESTDFNEWISSSEDIYPTTVPTNS---TREEESDDDEVIP 291
            E ++ N   + SED   +  P++S   T  E   + E+ P
Sbjct: 1094 EQSESNAGTTDSEDASESDQPSDSEKYTEVESCPEAEITP 1133


>gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
            [Medicago truncatula]
          Length = 1654

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
 Frame = +1

Query: 1    NNKEQLGKFSPKADEGIFVGYSLISTAFRIYNCRRKIIEESVHVKFDEKIKIDRQLSTEQ 180
            N K+ L KF  KA  GIF+GYS  S A+R+YN     +EES+HVKFD++       S   
Sbjct: 977  NTKDYLKKFDVKAQRGIFLGYSERSKAYRVYNSETHCVEESMHVKFDDR----EPGSKTP 1032

Query: 181  ESTDFNEWISSSEDIYPTTVPTNS---TREEESDDDEVIP 291
            E ++ N   + SED   +  P+NS   T  E   + E+ P
Sbjct: 1033 EQSESNAGTTDSEDASESDQPSNSEKYTEVESYPEAEITP 1072


>emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera]
          Length = 1409

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = +1

Query: 1   NNKEQLGKFSPKADEGIFVGYSLISTAFRIYNCRRKIIEESVHVKFDE 144
           N K+ LGKF  K+D GIF+GYS  S AFR++N R  ++EES+HV FDE
Sbjct: 832 NTKDNLGKFDAKSDVGIFLGYSTSSKAFRVFNKRTMVVEESIHVIFDE 879


>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
          Length = 2203

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = +1

Query: 1    NNKEQLGKFSPKADEGIFVGYSLISTAFRIYNCRRKIIEESVHVKFDE 144
            N K+ LGKF  K+D GIF+GYS  S AFR++N R  ++EES+HV FDE
Sbjct: 1273 NTKDNLGKFDAKSDVGIFLGYSTSSKAFRVFNKRTMVVEESIHVIFDE 1320


>emb|CAN70327.1| hypothetical protein VITISV_041473 [Vitis vinifera]
          Length = 433

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/91 (36%), Positives = 52/91 (57%)
 Frame = +1

Query: 4   NKEQLGKFSPKADEGIFVGYSLISTAFRIYNCRRKIIEESVHVKFDEKIKIDRQLSTEQE 183
           +K+ LGKF  K+D GIF+GYS  S AFR++N R  ++EES+HV FDE        ++ QE
Sbjct: 322 DKDNLGKFDAKSDVGIFLGYSTSSKAFRVFNKRAMVVEESIHVIFDE------SNNSLQE 375

Query: 184 STDFNEWISSSEDIYPTTVPTNSTREEESDD 276
              F++ +     +    +     +EE ++D
Sbjct: 376 RESFDDDLGLETSMRKLQIEDRRQQEEVAED 406


Top