BLASTX nr result
ID: Atractylodes21_contig00005955
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00005955
(868 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_851051.1| E3 ubiquitin-protein ligase RHF2A [Arabidopsis ... 117 3e-36
ref|NP_568410.1| E3 ubiquitin-protein ligase RHF2A [Arabidopsis ... 117 3e-36
dbj|BAH19547.1| AT5G22000 [Arabidopsis thaliana] 117 3e-36
dbj|BAC42950.1| putative RING-H2 finger protein RHF2a [Arabidops... 116 7e-36
gb|ACF84725.1| unknown [Zea mays] gi|195619558|gb|ACG31609.1| zi... 102 4e-31
>ref|NP_851051.1| E3 ubiquitin-protein ligase RHF2A [Arabidopsis thaliana]
gi|332005582|gb|AED92965.1| E3 ubiquitin-protein ligase
RHF2A [Arabidopsis thaliana]
Length = 375
Score = 117 bits (294), Expect(2) = 3e-36
Identities = 76/175 (43%), Positives = 103/175 (58%), Gaps = 5/175 (2%)
Frame = -1
Query: 589 DNVDAIGRTVHEESVRGSAPSSSVHASERPASPLISTIVPSRPHETPSTDRSVMQSSPNS 410
D D + H GS S++ + P S + PS + S R + QSSP+
Sbjct: 194 DESDTVSNLPHNALGEGSHQSNT----QPPTSSHPRQVSPSA---SDSNSRPLNQSSPSE 246
Query: 409 QDRAGPSELHSFSD-FKTRVNAISTRYKESITKTTKSWKERLFSRNNSTADHGSTDTGEG 233
QDRAGPSEL SFS+ K+R+NA+STRYKESI+K T++WK+RLFSRN S AD GS E
Sbjct: 247 QDRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWKDRLFSRNTSMADLGSEVKREV 306
Query: 232 SAGIATLSRMMDHLE--QDLAPVSNSINATSTSSPSDQRSQ--ATTANDSASRNE 80
SAGIAT+SRMM+ LE ++ P + S++ S + + ++ A D S NE
Sbjct: 307 SAGIATVSRMMERLETRENSRPSTASVSDVSENHTPETNNEHNRAAAGDEHSVNE 361
Score = 61.2 bits (147), Expect(2) = 3e-36
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = -3
Query: 866 FELQHLPVSATDAELEERIIQHLXXXXXXXXXXXXXXREGHRSQTSVQGRPRYLGFSAQP 687
FELQHLPV +AE+EERIIQHL REGHRS++S QG +++ FS+QP
Sbjct: 116 FELQHLPVGVDNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQP 175
>ref|NP_568410.1| E3 ubiquitin-protein ligase RHF2A [Arabidopsis thaliana]
gi|30688246|ref|NP_851050.1| E3 ubiquitin-protein ligase
RHF2A [Arabidopsis thaliana]
gi|75315838|sp|Q9ZT42.1|RHF2A_ARATH RecName: Full=E3
ubiquitin-protein ligase RHF2A; AltName: Full=RING-H2
zinc finger protein RHF2a
gi|11762136|gb|AAG40346.1|AF324994_1 CIC7E11
[Arabidopsis thaliana] gi|3790587|gb|AAC69856.1| RING-H2
finger protein RHF2a [Arabidopsis thaliana]
gi|13374859|emb|CAC34493.1| RING-H2 finger protein RHF2a
[Arabidopsis thaliana] gi|26983856|gb|AAN86180.1|
unknown protein [Arabidopsis thaliana]
gi|332005583|gb|AED92966.1| E3 ubiquitin-protein ligase
RHF2A [Arabidopsis thaliana] gi|332005584|gb|AED92967.1|
E3 ubiquitin-protein ligase RHF2A [Arabidopsis thaliana]
Length = 375
Score = 117 bits (294), Expect(2) = 3e-36
Identities = 76/175 (43%), Positives = 103/175 (58%), Gaps = 5/175 (2%)
Frame = -1
Query: 589 DNVDAIGRTVHEESVRGSAPSSSVHASERPASPLISTIVPSRPHETPSTDRSVMQSSPNS 410
D D + H GS S++ + P S + PS + S R + QSSP+
Sbjct: 194 DESDTVSNLPHNALGEGSHQSNT----QPPTSSHPRQVSPSA---SDSNSRPLNQSSPSE 246
Query: 409 QDRAGPSELHSFSD-FKTRVNAISTRYKESITKTTKSWKERLFSRNNSTADHGSTDTGEG 233
QDRAGPSEL SFS+ K+R+NA+STRYKESI+K T++WK+RLFSRN S AD GS E
Sbjct: 247 QDRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWKDRLFSRNTSMADLGSEVKREV 306
Query: 232 SAGIATLSRMMDHLE--QDLAPVSNSINATSTSSPSDQRSQ--ATTANDSASRNE 80
SAGIAT+SRMM+ LE ++ P + S++ S + + ++ A D S NE
Sbjct: 307 SAGIATVSRMMERLETRENSRPSTASVSDVSENHTPETNNEHNRAAAGDEHSVNE 361
Score = 61.2 bits (147), Expect(2) = 3e-36
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = -3
Query: 866 FELQHLPVSATDAELEERIIQHLXXXXXXXXXXXXXXREGHRSQTSVQGRPRYLGFSAQP 687
FELQHLPV +AE+EERIIQHL REGHRS++S QG +++ FS+QP
Sbjct: 116 FELQHLPVGVDNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQP 175
>dbj|BAH19547.1| AT5G22000 [Arabidopsis thaliana]
Length = 375
Score = 117 bits (294), Expect(2) = 3e-36
Identities = 78/176 (44%), Positives = 106/176 (60%), Gaps = 6/176 (3%)
Frame = -1
Query: 589 DNVDAIGRTVHEESVRGSAPSSSVHASERPASPLISTIVPSRPHETPSTDRSVMQSSPNS 410
D D + H GS S++ + P S + PS + S R + QSSP+
Sbjct: 194 DESDTVSNLPHNALGEGSHQSNT----QPPTSSHPRQVSPSA---SDSNSRPLNQSSPSE 246
Query: 409 QDRAGPSELHSFSD-FKTRVNAISTRYKESITKTTKSWKERLFSRNNSTADHGSTDTGEG 233
QDRAGPSEL SFS+ K+R+NA+STRYKESI+K T++WK+RLFSRN S AD GS E
Sbjct: 247 QDRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWKDRLFSRNTSMADLGSEVKREV 306
Query: 232 SAGIATLSRMMDHLE--QDLAPVSNSINATS---TSSPSDQRSQATTANDSASRNE 80
SAGIAT+SRMM+ LE ++ P + S++ S T +++ ++A A D S NE
Sbjct: 307 SAGIATVSRMMERLETRENSRPSTASVSDVSENHTPKTNNEHNRA-AAGDEHSVNE 361
Score = 61.2 bits (147), Expect(2) = 3e-36
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = -3
Query: 866 FELQHLPVSATDAELEERIIQHLXXXXXXXXXXXXXXREGHRSQTSVQGRPRYLGFSAQP 687
FELQHLPV +AE+EERIIQHL REGHRS++S QG +++ FS+QP
Sbjct: 116 FELQHLPVGVDNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQP 175
>dbj|BAC42950.1| putative RING-H2 finger protein RHF2a [Arabidopsis thaliana]
Length = 353
Score = 116 bits (290), Expect(2) = 7e-36
Identities = 75/168 (44%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
Frame = -1
Query: 589 DNVDAIGRTVHEESVRGSAPSSSVHASERPASPLISTIVPSRPHETPSTDRSVMQSSPNS 410
D D + H GS S++ + P S + PS + S R + QSSP+
Sbjct: 194 DESDTVSNLPHNALGEGSHQSNT----QPPTSSHPRQVSPSA---SDSNSRPLNQSSPSE 246
Query: 409 QDRAGPSELHSFSD-FKTRVNAISTRYKESITKTTKSWKERLFSRNNSTADHGSTDTGEG 233
QDRAGPSEL SFS+ K+R+NA+STRYKESI+K T++WK+RLFSRN S AD GS E
Sbjct: 247 QDRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWKDRLFSRNTSMADLGSEVKREV 306
Query: 232 SAGIATLSRMMDHLEQDLAPVSNSINATSTSSPSDQRSQATTANDSAS 89
SAGIAT+SRMM+ LE NS +T++ S + T N+ S
Sbjct: 307 SAGIATVSRMMERLETR----ENSRPSTASVSDVSENHTPETNNEHNS 350
Score = 61.2 bits (147), Expect(2) = 7e-36
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = -3
Query: 866 FELQHLPVSATDAELEERIIQHLXXXXXXXXXXXXXXREGHRSQTSVQGRPRYLGFSAQP 687
FELQHLPV +AE+EERIIQHL REGHRS++S QG +++ FS+QP
Sbjct: 116 FELQHLPVGVDNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQP 175
>gb|ACF84725.1| unknown [Zea mays] gi|195619558|gb|ACG31609.1| zinc finger,
RING-type [Zea mays] gi|238010776|gb|ACR36423.1| unknown
[Zea mays] gi|413925335|gb|AFW65267.1| putative RING
zinc finger domain superfamily protein isoform 1 [Zea
mays] gi|413925336|gb|AFW65268.1| putative RING zinc
finger domain superfamily protein isoform 2 [Zea mays]
gi|413925337|gb|AFW65269.1| putative RING zinc finger
domain superfamily protein isoform 3 [Zea mays]
Length = 396
Score = 102 bits (255), Expect(2) = 4e-31
Identities = 64/161 (39%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Frame = -1
Query: 568 RTVHEESVRGSAPSSSVHASERPASPLISTIVPSRPHETPSTDRSVMQSSPNSQDRAGPS 389
R + V +P + +E+ A P + S QS+P DRAGPS
Sbjct: 208 RAIRIGEVGNQSPGMLTYDAEQDAVVSSGNSTPVSSPRFFNRRHSTGQSTP---DRAGPS 264
Query: 388 ELHSFSD-FKTRVNAISTRYKESITKTTKSWKERLFSRNNSTADHGSTDTGEGSAGIATL 212
++ SFSD K+R+NA+S +YKESITK+T+ WKERLFSRN+S AD GS E +AGIA++
Sbjct: 265 DIQSFSDSLKSRLNAVSMKYKESITKSTRGWKERLFSRNSSVADLGSEVRREVNAGIASV 324
Query: 211 SRMMDHLEQDLAPVSNSINATSTSSPSDQRSQATTANDSAS 89
SRMM+ LE N+ ++ SP+ S+ +A +S++
Sbjct: 325 SRMMERLE-------TRGNSRTSDSPAASTSEVPSATESSN 358
Score = 58.9 bits (141), Expect(2) = 4e-31
Identities = 32/60 (53%), Positives = 36/60 (60%)
Frame = -3
Query: 866 FELQHLPVSATDAELEERIIQHLXXXXXXXXXXXXXXREGHRSQTSVQGRPRYLGFSAQP 687
FELQHLPV DAELEERI+QHL REGHR ++ GRP +L FS QP
Sbjct: 116 FELQHLPVG-NDAELEERILQHLAAAAAMGRAHHLGRREGHRGRSGSHGRPHFLVFSTQP 174