BLASTX nr result

ID: Atractylodes21_contig00005280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005280
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326147.1| predicted protein [Populus trichocarpa] gi|1...   189   2e-46
ref|XP_002516208.1| Eukaryotic translation initiation factor 3 s...   185   3e-45
ref|XP_002324723.1| predicted protein [Populus trichocarpa] gi|2...   185   3e-45
gb|ABK93965.1| unknown [Populus trichocarpa]                          185   3e-45
gb|AFK42050.1| unknown [Lotus japonicus]                              184   6e-45

>ref|XP_002326147.1| predicted protein [Populus trichocarpa] gi|118488161|gb|ABK95900.1|
           unknown [Populus trichocarpa]
           gi|222833340|gb|EEE71817.1| predicted protein [Populus
           trichocarpa]
          Length = 235

 Score =  189 bits (481), Expect = 2e-46
 Identities = 97/110 (88%), Positives = 105/110 (95%), Gaps = 5/110 (4%)
 Frame = +3

Query: 54  MGREQ--PSQSQ---MSYTVEQLVSVNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLR 218
           MGRE+  P++S+   +SYTVEQLV+VNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLR
Sbjct: 1   MGREREVPNKSEKEVISYTVEQLVAVNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLR 60

Query: 219 LYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMDEQFKTL 368
           LYQFEPERMSTQIVARIL+KALMAMPAPDFSLCLFLIPERVQM+EQFKTL
Sbjct: 61  LYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTL 110


>ref|XP_002516208.1| Eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223544694|gb|EEF46210.1|
           Eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 236

 Score =  185 bits (470), Expect = 3e-45
 Identities = 93/111 (83%), Positives = 100/111 (90%), Gaps = 6/111 (5%)
 Frame = +3

Query: 54  MGRE------QPSQSQMSYTVEQLVSVNPYNPDILPDLENYVNEQVSSQTYSLDANLCLL 215
           MGRE      Q  Q Q+SYTVEQLV+VNPYNPD+LPDLENYVN+QVSSQTYSLDANLCLL
Sbjct: 1   MGRERETQKSQQQQQQVSYTVEQLVAVNPYNPDVLPDLENYVNKQVSSQTYSLDANLCLL 60

Query: 216 RLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMDEQFKTL 368
           RLYQFEPERMSTQIVARIL+KALMA+PAPDFSLCLFLIPERVQM+EQ K L
Sbjct: 61  RLYQFEPERMSTQIVARILVKALMALPAPDFSLCLFLIPERVQMEEQLKNL 111


>ref|XP_002324723.1| predicted protein [Populus trichocarpa] gi|222866157|gb|EEF03288.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  185 bits (470), Expect = 3e-45
 Identities = 97/113 (85%), Positives = 101/113 (89%), Gaps = 8/113 (7%)
 Frame = +3

Query: 54  MGREQ-----PSQSQ---MSYTVEQLVSVNPYNPDILPDLENYVNEQVSSQTYSLDANLC 209
           MGRE+     P Q Q   +SYTVEQLV+VNPYNPDILPDLENYVNEQVSS TYSLDANLC
Sbjct: 1   MGREREAPQKPQQQQEEVVSYTVEQLVAVNPYNPDILPDLENYVNEQVSSLTYSLDANLC 60

Query: 210 LLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMDEQFKTL 368
           LLRLYQFEPERMSTQIVARILIKALMAMPAPDF LCLFLIPERVQM+EQFKTL
Sbjct: 61  LLRLYQFEPERMSTQIVARILIKALMAMPAPDFGLCLFLIPERVQMEEQFKTL 113


>gb|ABK93965.1| unknown [Populus trichocarpa]
          Length = 238

 Score =  185 bits (470), Expect = 3e-45
 Identities = 97/113 (85%), Positives = 101/113 (89%), Gaps = 8/113 (7%)
 Frame = +3

Query: 54  MGREQ-----PSQSQ---MSYTVEQLVSVNPYNPDILPDLENYVNEQVSSQTYSLDANLC 209
           MGRE+     P Q Q   +SYTVEQLV+VNPYNPDILPDLENYVNEQVSS TYSLDANLC
Sbjct: 1   MGREREAPQKPQQQQEEVVSYTVEQLVAVNPYNPDILPDLENYVNEQVSSLTYSLDANLC 60

Query: 210 LLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMDEQFKTL 368
           LLRLYQFEPERMSTQIVARILIKALMAMPAPDF LCLFLIPERVQM+EQFKTL
Sbjct: 61  LLRLYQFEPERMSTQIVARILIKALMAMPAPDFGLCLFLIPERVQMEEQFKTL 113


>gb|AFK42050.1| unknown [Lotus japonicus]
          Length = 229

 Score =  184 bits (467), Expect = 6e-45
 Identities = 90/105 (85%), Positives = 101/105 (96%)
 Frame = +3

Query: 54  MGREQPSQSQMSYTVEQLVSVNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLRLYQFE 233
           MGRE+  Q+Q+ Y VEQL+++NPYNPDILPDLENYVN+QVSSQTYSLDANLCLLRLYQFE
Sbjct: 1   MGRER-EQAQVGYAVEQLLALNPYNPDILPDLENYVNDQVSSQTYSLDANLCLLRLYQFE 59

Query: 234 PERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMDEQFKTL 368
           PE+MS+QIVARIL+KALMAMPAPDFSLCLFLIPERVQM+EQFKTL
Sbjct: 60  PEKMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTL 104


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