BLASTX nr result

ID: Atractylodes21_contig00005132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005132
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [...   123   3e-58
ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   158   1e-36
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]   158   1e-36
gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japo...   150   2e-34
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu...   149   5e-34

>ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [Cucumis sativus]
          Length = 1073

 Score =  123 bits (309), Expect(3) = 3e-58
 Identities = 64/115 (55%), Positives = 81/115 (70%), Gaps = 7/115 (6%)
 Frame = +1

Query: 469 KSPVLGYIAREAPKGMLLEKRNEKLTSSSLRLCDIATGLGDLFAVKDSGELTNVKKAAYL 648
           ++PV+GYIAREAP+G LLE  + KL +++  L DI  GL DLFA KD  E+ N+KKAA+L
Sbjct: 154 ENPVVGYIAREAPEGKLLETWSGKLKNANFELVDITNGLSDLFACKDDTEIMNIKKAAFL 213

Query: 649 TASAIKKFVVPKLNNVIQEEKKVTHSSLMDDILKAILVPARI-------MVDICY 792
           T S + + VVPK+ NVI EEKK+THSSLMD+  KAIL P +         VDICY
Sbjct: 214 TVSVMNRVVVPKMENVIDEEKKITHSSLMDETEKAILEPTKAGVKLKTENVDICY 268



 Score =  102 bits (255), Expect(3) = 3e-58
 Identities = 48/78 (61%), Positives = 62/78 (79%)
 Frame = +2

Query: 233 KSSALSKWLLGHEFTETIMVFFEQQVHFLCNQKKATMLDVVKNPAKETVGVDVVIHVKAN 412
           KSSAL  WL G+EF ET++VF ++Q+HFLC+QKK ++LDVVK  A + VG DVV+HVKA 
Sbjct: 70  KSSALHIWLFGYEFPETVIVFTKKQIHFLCSQKKVSLLDVVKKSAFDAVGADVVMHVKAK 129

Query: 413 TDDGATQMDAILRAIEAQ 466
            DDG++ MD+I RAI AQ
Sbjct: 130 NDDGSSLMDSIFRAIRAQ 147



 Score = 46.6 bits (109), Expect(3) = 3e-58
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +1

Query: 130 SLYSHWGEHGEELWGSGNAFAVAIPPLSADIHYFQ 234
           SLYSHWGEH  ++W S +   +  PP S D+ Y +
Sbjct: 36  SLYSHWGEHKSDMWSSSDVLTIGTPPASEDLRYLK 70


>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  158 bits (399), Expect = 1e-36
 Identities = 101/239 (42%), Positives = 130/239 (54%), Gaps = 18/239 (7%)
 Frame = +1

Query: 130 SLYSHWGEHGEELWGSGNAFAVAIPPLSADIHYFQVFSSQ*VVAWS*VYR---NYNGFLR 300
           +LYSHW EH  +LWGS +A A+A PP S D+ Y +   S  +  W   Y        F++
Sbjct: 36  TLYSHWKEHSSDLWGSSDALAIATPPASDDLRYLK---SSALNIWLLGYEFPETIMVFMK 92

Query: 301 TAGAFLMQPEEGDHA*CCQKPXXXXXXXXXXXXXEGKH**WGYSNGCH--------ITCH 456
               FL   ++       +K              + K       +G          +  +
Sbjct: 93  KQIHFLCSQKKASLLEVVRKSAKEAVGVEVVMHVKAKS-----DDGTGLMDAIFRAVRAN 147

Query: 457 *SSKKSPVLGYIAREAPKGMLLEKRNEKLTSSSLRLCDIATGLGDLFAVKDSGELTNVKK 636
            SS  +PV+G+I REAP+G LLE   EKL ++  +L DI  G  DLFA+KDS ELTNVKK
Sbjct: 148 SSSHDTPVVGHIGREAPEGKLLEMWTEKLKNADFQLSDITNGFSDLFAMKDSTELTNVKK 207

Query: 637 AAYLTASAIKKFVVPKLNNVIQEEKKVTHSSLMDDILKAILVPARIM-------VDICY 792
           AA+LT+S +K FVVPKL  VI EEKKV+HSSLMDD  KAIL PAR+        VDICY
Sbjct: 208 AAFLTSSVMKHFVVPKLEKVIDEEKKVSHSSLMDDTEKAILEPARVKVKLKAENVDICY 266


>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
          Length = 1019

 Score =  158 bits (399), Expect = 1e-36
 Identities = 101/239 (42%), Positives = 130/239 (54%), Gaps = 18/239 (7%)
 Frame = +1

Query: 130 SLYSHWGEHGEELWGSGNAFAVAIPPLSADIHYFQVFSSQ*VVAWS*VYR---NYNGFLR 300
           +LYSHW EH  +LWGS +A A+A PP S D+ Y +   S  +  W   Y        F++
Sbjct: 36  TLYSHWKEHSSDLWGSSDALAIATPPASDDLRYLK---SSALNIWLLGYEFPETIMVFMK 92

Query: 301 TAGAFLMQPEEGDHA*CCQKPXXXXXXXXXXXXXEGKH**WGYSNGCH--------ITCH 456
               FL   ++       +K              + K       +G          +  +
Sbjct: 93  KQIHFLCSQKKASLLEVVRKSAKEAVGVEVVMHVKAKS-----DDGTGLMDAIFRAVRAN 147

Query: 457 *SSKKSPVLGYIAREAPKGMLLEKRNEKLTSSSLRLCDIATGLGDLFAVKDSGELTNVKK 636
            SS  +PV+G+I REAP+G LLE   EKL ++  +L DI  G  DLFA+KDS ELTNVKK
Sbjct: 148 SSSHDTPVVGHIGREAPEGKLLEMWTEKLKNADFQLSDITNGFSDLFAMKDSTELTNVKK 207

Query: 637 AAYLTASAIKKFVVPKLNNVIQEEKKVTHSSLMDDILKAILVPARIM-------VDICY 792
           AA+LT+S +K FVVPKL  VI EEKKV+HSSLMDD  KAIL PAR+        VDICY
Sbjct: 208 AAFLTSSVMKHFVVPKLEKVIDEEKKVSHSSLMDDTEKAILEPARVKVKLKAENVDICY 266


>gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japonica Group]
          Length = 1056

 Score =  150 bits (380), Expect = 2e-34
 Identities = 94/236 (39%), Positives = 128/236 (54%), Gaps = 17/236 (7%)
 Frame = +1

Query: 136 YSHWGEHGEELWGSGNAFAVAIPPLSADIHYFQVFSSQ*VVAWS*VYR---NYNGFLRTA 306
           Y HW EH  +LWGS NA A+A PP S D+ Y +   S  +  W   Y        F+   
Sbjct: 32  YDHWKEHNSDLWGSSNAIAIATPPPSEDLRYLK---SSALDVWLLGYEFPETIIVFMHKQ 88

Query: 307 GAFLMQPEEGDHA*CCQKPXXXXXXXXXXXXXEGKH**WGYSNGCHI-------TCH*SS 465
             FL   ++ +     +K              + K+      +G  +        C  S 
Sbjct: 89  IHFLCSQKKANLIGTLKKAANDAVGADIVLHVKAKN-----DSGVGLMEDIVRAVCAQSK 143

Query: 466 KKSPVLGYIAREAPKGMLLEKRNEKLTSSSLRLCDIATGLGDLFAVKDSGELTNVKKAAY 645
              P++G+IA+EAP+G LLE   +KL+SSS++L DI  G  +LFA+KD+ E+T VKKA+Y
Sbjct: 144 SDDPIVGHIAKEAPEGKLLEAWADKLSSSSVQLTDITNGFSELFAMKDTSEITCVKKASY 203

Query: 646 LTASAIKKFVVPKLNNVIQEEKKVTHSSLMDDILKAILVPARIM-------VDICY 792
           LT+S +K FVVPKL  VI EE+KVTHSSLMD+  KAIL P ++        VDICY
Sbjct: 204 LTSSVMKNFVVPKLEKVIDEERKVTHSSLMDETEKAILDPLKVKVKLKAENVDICY 259


>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
           gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
           putative [Ricinus communis]
          Length = 1098

 Score =  149 bits (377), Expect = 5e-34
 Identities = 94/232 (40%), Positives = 126/232 (54%), Gaps = 12/232 (5%)
 Frame = +1

Query: 133 LYSHWGEHGEELWGSGNAFAVAIPPLSADIHYFQVFSSQ*VVAWS*VYRNYNGFLRTAGA 312
           LY HW E+  ELWG+ +A AVA PP S D+ Y +  +    +           F++    
Sbjct: 36  LYLHWSENNIELWGASDALAVATPPPSEDLRYLKSTALNIWLVGYEFPETIMVFMKKQVH 95

Query: 313 FLMQPEEGDHA*CCQKPXXXXXXXXXXXXX-----EGKH**WGYSNGCHITCH*SSKKSP 477
           FL   ++       +KP                  +G        N  H +   S  K+P
Sbjct: 96  FLCSQKKASLLDVVKKPAKESIGVEVVMHVKTKSDDGSSLMDNIFNAVHAS---SGDKTP 152

Query: 478 VLGYIAREAPKGMLLEKRNEKLTSSSLRLCDIATGLGDLFAVKDSGELTNVKKAAYLTAS 657
           V+G+IARE+P+G LLE  ++KL + +  L D+  G  DLFAVKD+ ELT V+KAA+LT+S
Sbjct: 153 VIGHIARESPEGKLLEIWDKKLKNGNCELSDVTNGFSDLFAVKDNTELTYVRKAAFLTSS 212

Query: 658 AIKKFVVPKLNNVIQEEKKVTHSSLMDDILKAILVPARIMV-------DICY 792
            +K+FVVPKL  VI EEKK+THSS MD+  KAIL PARI V       DICY
Sbjct: 213 VMKQFVVPKLEKVIDEEKKITHSSFMDETEKAILEPARIKVKLKAENIDICY 264


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