BLASTX nr result
ID: Atractylodes21_contig00005090
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00005090
(1395 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 486 e-135
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 478 e-132
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 477 e-132
emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera] 475 e-131
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 470 e-130
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 486 bits (1250), Expect = e-135
Identities = 242/431 (56%), Positives = 308/431 (71%), Gaps = 2/431 (0%)
Frame = -3
Query: 1393 VKFTTVRVVLSLAVAQNWPLRQLDVQNAFLHGDLAETVYLRQPPGFIDPQKPDHVCLLHK 1214
VK +T+R+VLSLAV+Q W LRQLDVQNAFLHG L ETVY++QPPGF D P++ C L K
Sbjct: 1010 VKHSTIRLVLSLAVSQKWSLRQLDVQNAFLHGILEETVYMKQPPGFADTTHPNYHCHLQK 1069
Query: 1213 SLYGLKQAPRAWFHRLSRALLSLGFKGSTTDPSLFIYFSQGTLLYMLVYVDDIILTGNNP 1034
SLYGLKQ PRAW+ RLS L SLGF S D SLFIY + T +Y+LVYVDDII+TG++P
Sbjct: 1070 SLYGLKQRPRAWYSRLSEKLQSLGFVPSKADVSLFIYNAHSTAIYILVYVDDIIITGSSP 1129
Query: 1033 TVIDQIIKNLSQTFAVQDLGPLSYFLGIEVTPKGADLLLSQRKYILEILQKAGLSQAKPV 854
ID ++ L FA++DLG L YFLGIEV KG LLL Q KY ++L++ G+ KPV
Sbjct: 1130 HAIDNVLAKLKDDFAIKDLGDLHYFLGIEVHRKGDGLLLCQEKYARDLLKRVGMECCKPV 1189
Query: 853 --XXXXXXXXXXXLGDSPPFENPVRYRQIVGALQYATLSRPDITFAVNKVCQFMHSPTEN 680
G E +YR +VGALQY TL+RPD+++A+N+VCQF+H+PT+
Sbjct: 1190 HTPVATSEKLSASAGTLLSPEETTKYRSVVGALQYLTLTRPDLSYAINRVCQFLHAPTDL 1249
Query: 679 HWSAVKRILRYLQGTADYGLLVKHDSGCVLHAYSDAHSPFVNAFSDADWAGCPDDRRSTG 500
HW+AVKRILR +Q T GL ++ +L +AFSDADWAGCPDDR+STG
Sbjct: 1250 HWTAVKRILRNIQHTIGLGLTIRPSLSLML-----------SAFSDADWAGCPDDRKSTG 1298
Query: 499 GYAIYLGSNLVSWSARKQKTVSRSSTESEYKALADTVAEITWLESLLCELRVPMATAPIL 320
GYA++LG NL+SW+++KQ TVSRSSTE+EYKA+A+ AE+ WL+SLL EL + + P L
Sbjct: 1299 GYALFLGPNLISWNSKKQSTVSRSSTEAEYKAMANATAEVIWLQSLLHELGIRLTGIPRL 1358
Query: 319 WCDNLGATYLSANPVFHARTKHVEVDFHFVREKVAEKKLSVQFISTDDQIADVFTKPLLS 140
WCDNLGATYLS+ P+F+ARTKH+EVDFHFVR++V KKL ++ IST+DQ+AD FTK L
Sbjct: 1359 WCDNLGATYLSSKPIFNARTKHIEVDFHFVRDRVLSKKLDIRLISTNDQVADGFTKALTI 1418
Query: 139 QRFASLRSKLQ 107
R R + Q
Sbjct: 1419 GRLNEFRRQSQ 1429
>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 478 bits (1229), Expect = e-132
Identities = 241/432 (55%), Positives = 307/432 (71%), Gaps = 2/432 (0%)
Frame = -3
Query: 1393 VKFTTVRVVLSLAVAQNWPLRQLDVQNAFLHGDLAETVYLRQPPGFIDPQKPDHVCLLHK 1214
VK T+R++LS+AV++ W LRQLDVQNAFLHG L E VY+RQPPGF + +P+++C L K
Sbjct: 511 VKAATIRLILSIAVSKGWSLRQLDVQNAFLHGYLEEEVYMRQPPGFENKGQPNYLCKLDK 570
Query: 1213 SLYGLKQAPRAWFHRLSRALLSLGFKGSTTDPSLFIYFSQGTLLYMLVYVDDIILTGNNP 1034
+LYGLKQAPRAW+ RLS L LGF S D SLF Y G +++LVYVDDII+ ++
Sbjct: 571 ALYGLKQAPRAWYSRLSTKLQELGFISSKADTSLFFYNKGGCTIFILVYVDDIIVASSSA 630
Query: 1033 TVIDQIIKNLSQTFAVQDLGPLSYFLGIEVTPKGADLLLSQRKYILEILQKAGLSQAKPV 854
V+ ++K+L + FA++DLG L YFLGIEV L+LSQ Y +IL++AG+S KP
Sbjct: 631 EVVAALLKDLEKDFALKDLGDLHYFLGIEVKKVSQGLVLSQAWYASDILKRAGMSICKPA 690
Query: 853 XXXXXXXXXXXL--GDSPPFENPVRYRQIVGALQYATLSRPDITFAVNKVCQFMHSPTEN 680
+ GD + YR IVGALQY TL+R D++F VNKVCQF+HSPT
Sbjct: 691 STPLSTTEKLSIEDGDFLGQNDASHYRSIVGALQYLTLTRSDLSFLVNKVCQFLHSPTTV 750
Query: 679 HWSAVKRILRYLQGTADYGLLVKHDSGCVLHAYSDAHSPFVNAFSDADWAGCPDDRRSTG 500
HWSAVKRILRY++GT ++GL + + S ++AFSDADWAGC DDRRSTG
Sbjct: 751 HWSAVKRILRYIKGTVEFGL-----------RFGKSDSMLISAFSDADWAGCSDDRRSTG 799
Query: 499 GYAIYLGSNLVSWSARKQKTVSRSSTESEYKALADTVAEITWLESLLCELRVPMATAPIL 320
G+A++LG NL+SWSARKQ TVSRSSTE+EYKALA+ E+TW+ +L ELR+ + L
Sbjct: 800 GFAVFLGPNLISWSARKQATVSRSSTEAEYKALANATTEVTWVRKILDELRIARPSVAQL 859
Query: 319 WCDNLGATYLSANPVFHARTKHVEVDFHFVREKVAEKKLSVQFISTDDQIADVFTKPLLS 140
WCDNLGATYLSANPVFHARTKH+E+D+HFVRE+VA+K L +QFIST DQ+AD FTK L +
Sbjct: 860 WCDNLGATYLSANPVFHARTKHIEIDYHFVREQVAKKLLDIQFISTTDQLADGFTKSLPA 919
Query: 139 QRFASLRSKLQV 104
A R L +
Sbjct: 920 PSLAQYRHNLNL 931
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 477 bits (1227), Expect = e-132
Identities = 244/433 (56%), Positives = 306/433 (70%), Gaps = 2/433 (0%)
Frame = -3
Query: 1393 VKFTTVRVVLSLAVAQNWPLRQLDVQNAFLHGDLAETVYLRQPPGFIDPQKPDHVCLLHK 1214
VK T+R++LSLAV++ W LRQLDVQNAFLHG L E VY+ QPPGF DP KP HVC L K
Sbjct: 1030 VKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKLDK 1089
Query: 1213 SLYGLKQAPRAWFHRLSRALLSLGFKGSTTDPSLFIYFSQGTLLYMLVYVDDIILTGNNP 1034
+LYGLKQAPRAWF RLS+ L+ LGFKGS D SLF +++LVYVDDII+ ++
Sbjct: 1090 ALYGLKQAPRAWFSRLSKKLMDLGFKGSKPDTSLFFLNKGDITMFVLVYVDDIIVASSSE 1149
Query: 1033 TVIDQIIKNLSQTFAVQDLGPLSYFLGIEVTPKGADLLLSQRKYILEILQKAGLSQAKPV 854
++++L FA++DLG L YFLGIEV+ ++L+Q KY ++L+K G+ KP
Sbjct: 1150 KATAALLQDLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKYANDLLKKVGMIDCKPA 1209
Query: 853 XXXXXXXXXXXLGDSPPF--ENPVRYRQIVGALQYATLSRPDITFAVNKVCQFMHSPTEN 680
L + E+ YR +VGALQY TL+RPDI F+VNKVCQF+H+PT
Sbjct: 1210 NTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIAFSVNKVCQFLHAPTTV 1269
Query: 679 HWSAVKRILRYLQGTADYGLLVKHDSGCVLHAYSDAHSPFVNAFSDADWAGCPDDRRSTG 500
HW AVKRILRYL+ GL + H SG L V+ FSDADWAGC DDRRSTG
Sbjct: 1270 HWIAVKRILRYLKQCTRLGLEI-HKSGSTL----------VSGFSDADWAGCLDDRRSTG 1318
Query: 499 GYAIYLGSNLVSWSARKQKTVSRSSTESEYKALADTVAEITWLESLLCELRVPMATAPIL 320
G+AI+LGSNLVSW+ARKQ TVSRSSTESEYKA+A+ AEI W+++LL EL + A +
Sbjct: 1319 GFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQTLLAELEIKSPKAAKI 1378
Query: 319 WCDNLGATYLSANPVFHARTKHVEVDFHFVREKVAEKKLSVQFISTDDQIADVFTKPLLS 140
WCDNLGA YLSANPVFHARTKH+EVD+HFVRE+V++K L + F+ST+DQ+AD FTKPL
Sbjct: 1379 WCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVSTNDQVADGFTKPLSV 1438
Query: 139 QRFASLRSKLQVV 101
+ + +S L +V
Sbjct: 1439 RLLENFKSNLNLV 1451
>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
Length = 1239
Score = 475 bits (1222), Expect = e-131
Identities = 245/437 (56%), Positives = 306/437 (70%)
Frame = -3
Query: 1393 VKFTTVRVVLSLAVAQNWPLRQLDVQNAFLHGDLAETVYLRQPPGFIDPQKPDHVCLLHK 1214
VK TTVRVVLSLAV WPLRQLDV+NAFL+G L E VY+ QPPG+IDP+ P HVCLL K
Sbjct: 792 VKATTVRVVLSLAVTNKWPLRQLDVKNAFLNGTLTEHVYMEQPPGYIDPRFPTHVCLLKK 851
Query: 1213 SLYGLKQAPRAWFHRLSRALLSLGFKGSTTDPSLFIYFSQGTLLYMLVYVDDIILTGNNP 1034
+LYGLKQAPRAWF R S LL+LGF S D SLF++ Q +L+Y+L+YVDDII+TGNNP
Sbjct: 852 ALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSSLIYLLLYVDDIIVTGNNP 911
Query: 1033 TVIDQIIKNLSQTFAVQDLGPLSYFLGIEVTPKGADLLLSQRKYILEILQKAGLSQAKPV 854
+++D + L FA +DLG LSYFLG+E +P L +SQ KY +IL +A L +KPV
Sbjct: 912 SLLDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPV 971
Query: 853 XXXXXXXXXXXLGDSPPFENPVRYRQIVGALQYATLSRPDITFAVNKVCQFMHSPTENHW 674
+ S PF NP YR +VGALQY T++RPDI AVN V QF+H+PT +H+
Sbjct: 972 HTPMVVSQHLTVAGS-PFSNPTLYRSLVGALQYLTITRPDIAHAVNSVSQFLHAPTIDHF 1030
Query: 673 SAVKRILRYLQGTADYGLLVKHDSGCVLHAYSDAHSPFVNAFSDADWAGCPDDRRSTGGY 494
AVKRILRY++GT +GL + S S V A+SDADWAGCPD RRST GY
Sbjct: 1031 LAVKRILRYVKGTLHFGLTFRP---------STIPSALV-AYSDADWAGCPDTRRSTSGY 1080
Query: 493 AIYLGSNLVSWSARKQKTVSRSSTESEYKALADTVAEITWLESLLCELRVPMATAPILWC 314
+IYLG+NLVSWSA+KQ TVSRSS ESEY+ALA T AE+ WL LL +L+VP+ P+L C
Sbjct: 1081 SIYLGNNLVSWSAKKQPTVSRSSCESEYRALAMTAAELLWLTHLLHDLKVPIPXQPLLLC 1140
Query: 313 DNLGATYLSANPVFHARTKHVEVDFHFVREKVAEKKLSVQFISTDDQIADVFTKPLLSQR 134
DN A +LS+NPV H R KHVE+D+HF+RE V KL +++ + Q+AD+FTK +
Sbjct: 1141 DNKSAIFLSSNPVSHKRAKHVELDYHFLRELVVAGKLRTEYVPSHLQVADIFTKSVSRPL 1200
Query: 133 FASLRSKLQVVSRP*LA 83
F RSKL + S P L+
Sbjct: 1201 FEFFRSKLHIRSNPTLS 1217
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 470 bits (1210), Expect = e-130
Identities = 224/434 (51%), Positives = 305/434 (70%)
Frame = -3
Query: 1393 VKFTTVRVVLSLAVAQNWPLRQLDVQNAFLHGDLAETVYLRQPPGFIDPQKPDHVCLLHK 1214
VK +T+R++L++A++ NW + QLDVQNAFLHGDL E V+++QPPGFI+ Q P HVC L+K
Sbjct: 797 VKASTIRIILAVALSFNWSVHQLDVQNAFLHGDLEEHVFMQQPPGFINSQYPSHVCKLNK 856
Query: 1213 SLYGLKQAPRAWFHRLSRALLSLGFKGSTTDPSLFIYFSQGTLLYMLVYVDDIILTGNNP 1034
+LYGLKQAPRAW+++LS +LL GF+ S D S+FI+ S +L +L+YVDDI++TG++
Sbjct: 857 ALYGLKQAPRAWYNKLSTSLLGWGFQASRADSSMFIHHSTHDVLILLIYVDDILVTGSSS 916
Query: 1033 TVIDQIIKNLSQTFAVQDLGPLSYFLGIEVTPKGADLLLSQRKYILEILQKAGLSQAKPV 854
+ I L+ +FA++DLG ++YFLGIEV G LSQ KY ++L + + +KP
Sbjct: 917 AQVSSFITRLNSSFALRDLGYVNYFLGIEVVRSGTMFHLSQHKYTQDLLSRTAMLDSKPA 976
Query: 853 XXXXXXXXXXXLGDSPPFENPVRYRQIVGALQYATLSRPDITFAVNKVCQFMHSPTENHW 674
D PF + YR VGALQY TL+RPDI+FAVNK CQFM +PT HW
Sbjct: 977 TTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRPDISFAVNKACQFMATPTTTHW 1036
Query: 673 SAVKRILRYLQGTADYGLLVKHDSGCVLHAYSDAHSPFVNAFSDADWAGCPDDRRSTGGY 494
AVKRILRYL+GT YG+ ++ + +H Y+DA DWA CPDDRRSTGGY
Sbjct: 1037 LAVKRILRYLKGTLSYGIQMQQSTSLDIHGYTDA-----------DWASCPDDRRSTGGY 1085
Query: 493 AIYLGSNLVSWSARKQKTVSRSSTESEYKALADTVAEITWLESLLCELRVPMATAPILWC 314
I+LG NLVSWS+ KQK VSRSS ESEY+ALA +E+ W++ +L EL + ++ P+LWC
Sbjct: 1086 GIFLGPNLVSWSSNKQKVVSRSSAESEYRALASATSEMIWIQYVLQELCLSSSSPPLLWC 1145
Query: 313 DNLGATYLSANPVFHARTKHVEVDFHFVREKVAEKKLSVQFISTDDQIADVFTKPLLSQR 134
DN A +L+ANPVFHARTKH+E+D HF+R+ V K+L +Q++ + +Q+AD+FTK + S +
Sbjct: 1146 DNKSAAHLAANPVFHARTKHIEMDLHFIRDHVLRKQLVIQYLPSAEQVADIFTKHISSSQ 1205
Query: 133 FASLRSKLQVVSRP 92
F S R+KL VV P
Sbjct: 1206 FLSFRTKLSVVPSP 1219